RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 KIAA1211Q6ZU35 1233 aa28.46■■■□□ 2.15
CUEDC1-202ENST00000407144 DDX11L8A8MPP1 907 aa28.45■■■□□ 2.15
CUEDC1-202ENST00000407144 ZNF521Q96K83 1311 aa28.44■■■□□ 2.14
CUEDC1-202ENST00000407144 PLB1Q6P1J6 1458 aa28.42■■■□□ 2.14
CUEDC1-202ENST00000407144 OFD1O75665 1012 aa28.41■■■□□ 2.14
CUEDC1-202ENST00000407144 GOLGA2Q08379 1002 aa28.39■■■□□ 2.14
CUEDC1-202ENST00000407144 SMAP1Q8IYB5 467 aaPredicted RBP28.39■■■□□ 2.14
CUEDC1-202ENST00000407144 IGHDP01880 384 aa28.38■■■□□ 2.13
CUEDC1-202ENST00000407144 FGD1P98174 961 aa28.38■■■□□ 2.13
CUEDC1-202ENST00000407144 PLEKHH1Q9ULM0 1364 aa28.37■■■□□ 2.13
CUEDC1-202ENST00000407144 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.37■■■□□ 2.13
CUEDC1-202ENST00000407144 CGNL1Q0VF96 1302 aa28.36■■■□□ 2.13
CUEDC1-202ENST00000407144 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
CUEDC1-202ENST00000407144 EPRSP07814 1512 aaKnown RBP28.35■■■□□ 2.13
CUEDC1-202ENST00000407144 RIPK4P57078 832 aa28.34■■■□□ 2.13
CUEDC1-202ENST00000407144 NINLQ9Y2I6 1382 aa28.34■■■□□ 2.13
CUEDC1-202ENST00000407144 MTERF4Q7Z6M4 381 aaKnown RBP28.34■■■□□ 2.13
CUEDC1-202ENST00000407144 SLFN5Q08AF3 891 aa28.33■■■□□ 2.13
CUEDC1-202ENST00000407144 CCDC173Q0VFZ6 552 aa28.33■■■□□ 2.12
CUEDC1-202ENST00000407144 ZSCAN30Q86W11 494 aa28.33■■■□□ 2.12
CUEDC1-202ENST00000407144 PPP1R9BQ96SB3 815 aa28.33■■■□□ 2.12
CUEDC1-202ENST00000407144 ABCA8O94911 1581 aa28.32■■■□□ 2.12
CUEDC1-202ENST00000407144 A0A0U1RQG5 324 aaPredicted RBP28.32■■■□□ 2.12
CUEDC1-202ENST00000407144 ABCC2Q92887 1545 aa28.32■■■□□ 2.12
CUEDC1-202ENST00000407144 SCAPERQ9BY12 1400 aa28.31■■■□□ 2.12
CUEDC1-202ENST00000407144 PDE3AQ14432 1141 aa28.3■■■□□ 2.12
CUEDC1-202ENST00000407144 ADAMTS8Q9UP79 889 aa28.3■■■□□ 2.12
CUEDC1-202ENST00000407144 PTMSP20962 102 aa28.29■■■□□ 2.12
CUEDC1-202ENST00000407144 NKTRP30414 1462 aaKnown RBP28.28■■■□□ 2.12
CUEDC1-202ENST00000407144 PKD2Q13563 968 aa28.27■■■□□ 2.12
CUEDC1-202ENST00000407144 SKOR2Q2VWA4 1001 aaPredicted RBP28.27■■■□□ 2.12
CUEDC1-202ENST00000407144 UHRF1BP1LA0JNW5 1464 aa28.26■■■□□ 2.12
CUEDC1-202ENST00000407144 ANKRD30AQ9BXX3 1397 aa28.26■■■□□ 2.11
CUEDC1-202ENST00000407144 ARID3CA6NKF2 412 aa28.26■■■□□ 2.11
CUEDC1-202ENST00000407144 CLUAP1Q96AJ1 413 aa28.26■■■□□ 2.11
CUEDC1-202ENST00000407144 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
CUEDC1-202ENST00000407144 COL17A1Q9UMD9 1497 aaPredicted RBP28.25■■■□□ 2.11
CUEDC1-202ENST00000407144 RAPGEF6Q8TEU7 1601 aa28.24■■■□□ 2.11
CUEDC1-202ENST00000407144 CC2D1BQ5T0F9 858 aaKnown RBP28.24■■■□□ 2.11
CUEDC1-202ENST00000407144 ZNF692Q9BU19 519 aaPredicted RBP28.24■■■□□ 2.11
CUEDC1-202ENST00000407144 GAS2L3Q86XJ1 694 aa28.23■■■□□ 2.11
CUEDC1-202ENST00000407144 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
CUEDC1-202ENST00000407144 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
CUEDC1-202ENST00000407144 UTP14CQ5TAP6 766 aaKnown RBP28.21■■■□□ 2.11
CUEDC1-202ENST00000407144 HS1BP3Q53T59 392 aa28.2■■■□□ 2.11
CUEDC1-202ENST00000407144 ZCCHC11Q5TAX3 1644 aaKnown RBP28.2■■■□□ 2.1
CUEDC1-202ENST00000407144 RTEL1-TNFRSF6BF6WH68 1400 aa28.2■■■□□ 2.1
CUEDC1-202ENST00000407144 DDIT3P35638 169 aa28.2■■■□□ 2.1
CUEDC1-202ENST00000407144 PMFBP1Q8TBY8 1022 aa28.2■■■□□ 2.1
CUEDC1-202ENST00000407144 MSNP26038 577 aaKnown RBP28.19■■■□□ 2.1
CUEDC1-202ENST00000407144 WDR43Q15061 677 aaKnown RBP eCLIP28.18■■■□□ 2.1
CUEDC1-202ENST00000407144 NUP153P49790 1475 aaKnown RBP28.17■■■□□ 2.1
CUEDC1-202ENST00000407144 SPRYD3Q8NCJ5 442 aa28.17■■■□□ 2.1
CUEDC1-202ENST00000407144 CIZ1Q9ULV3 898 aaPredicted RBP28.17■■■□□ 2.1
CUEDC1-202ENST00000407144 CDK13Q14004 1512 aaKnown RBP28.16■■■□□ 2.1
CUEDC1-202ENST00000407144 TRPM1Q7Z4N2 1603 aa28.16■■■□□ 2.1
CUEDC1-202ENST00000407144 FAM13BQ9NYF5 915 aa28.16■■■□□ 2.1
CUEDC1-202ENST00000407144 LAMC1P11047 1609 aa28.15■■■□□ 2.1
CUEDC1-202ENST00000407144 BCAR3O75815 825 aa28.15■■■□□ 2.1
CUEDC1-202ENST00000407144 IBTKQ9P2D0 1353 aaPredicted RBP28.15■■■□□ 2.1
CUEDC1-202ENST00000407144 NPM1P06748 294 aaKnown RBP eCLIP28.14■■■□□ 2.1
CUEDC1-202ENST00000407144 ANP32BQ92688 251 aaKnown RBP28.14■■■□□ 2.1
CUEDC1-202ENST00000407144 GBP4Q96PP9 640 aa28.14■■■□□ 2.1
CUEDC1-202ENST00000407144 PLXNC1O60486 1568 aa28.14■■■□□ 2.1
CUEDC1-202ENST00000407144 DYNC1I1O14576 645 aa28.13■■■□□ 2.09
CUEDC1-202ENST00000407144 CAMSAP2Q08AD1 1489 aa28.13■■■□□ 2.09
CUEDC1-202ENST00000407144 ZNF500O60304 480 aaPredicted RBP28.13■■■□□ 2.09
CUEDC1-202ENST00000407144 C22orf23Q9BZE7 217 aa28.13■■■□□ 2.09
CUEDC1-202ENST00000407144 PANK3Q9H999 370 aa28.13■■■□□ 2.09
CUEDC1-202ENST00000407144 GPRASP1Q5JY77 1395 aa28.12■■■□□ 2.09
CUEDC1-202ENST00000407144 E9PSI1 815 aa28.12■■■□□ 2.09
CUEDC1-202ENST00000407144 HSCBQ8IWL3 235 aa28.12■■■□□ 2.09
CUEDC1-202ENST00000407144 NASPP49321 788 aaPredicted RBP28.11■■■□□ 2.09
CUEDC1-202ENST00000407144 ATP10BO94823 1461 aa28.11■■■□□ 2.09
CUEDC1-202ENST00000407144 NCLP19338 710 aaKnown RBP28.1■■■□□ 2.09
CUEDC1-202ENST00000407144 NGEFQ8N5V2 710 aa28.1■■■□□ 2.09
CUEDC1-202ENST00000407144 DMTNQ08495 405 aa28.09■■■□□ 2.09
CUEDC1-202ENST00000407144 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.09
CUEDC1-202ENST00000407144 R3HCC1Q9Y3T6 440 aaKnown RBP28.08■■■□□ 2.09
CUEDC1-202ENST00000407144 ZNF644Q9H582 1327 aaPredicted RBP28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 TNPO1Q92973 898 aaKnown RBP28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 KDM2AQ9Y2K7 1162 aa28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 ASXL2Q76L83 1435 aa28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 PDZRN3Q9UPQ7 1066 aa28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 PRAG1Q86YV5 1406 aa28.07■■■□□ 2.08
CUEDC1-202ENST00000407144 PPP2R1AP30153 589 aa28.06■■■□□ 2.08
CUEDC1-202ENST00000407144 SMC5Q8IY18 1101 aa28.06■■■□□ 2.08
CUEDC1-202ENST00000407144 SNX21Q969T3 373 aa28.06■■■□□ 2.08
CUEDC1-202ENST00000407144 NOL7Q9UMY1 257 aaKnown RBP28.06■■■□□ 2.08
CUEDC1-202ENST00000407144 UQCRHLA0A096LP55 91 aa28.05■■■□□ 2.08
CUEDC1-202ENST00000407144 UQCRHP07919 91 aa28.05■■■□□ 2.08
CUEDC1-202ENST00000407144 DISP3Q9P2K9 1392 aa28.05■■■□□ 2.08
CUEDC1-202ENST00000407144 CROCC2H7BZ55 1655 aa28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 TRHP20396 242 aaPredicted RBP28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 PDE4CQ08493 712 aa28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 RAB3GAP1Q15042 981 aa28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 CSPP1Q1MSJ5 1256 aa28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 PRDM15P57071 1507 aaPredicted RBP28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 TESK2Q96S53 571 aa28.04■■■□□ 2.08
CUEDC1-202ENST00000407144 PIK3C2GO75747 1445 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms