RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 MYO5BQ9ULV0 1848 aa19.37■□□□□ 0.69
PRAME-205ENST00000405655 LAMC1P11047 1609 aa19.37■□□□□ 0.69
PRAME-205ENST00000405655 TMEM132EQ6IEE7 984 aa19.37■□□□□ 0.69
PRAME-205ENST00000405655 IQGAP1P46940 1657 aa19.37■□□□□ 0.69
PRAME-205ENST00000405655 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
PRAME-205ENST00000405655 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRAME-205ENST00000405655 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
PRAME-205ENST00000405655 PPLO60437 1756 aa19.33■□□□□ 0.68
PRAME-205ENST00000405655 ARID4BQ4LE39 1312 aaPredicted RBP19.33■□□□□ 0.68
PRAME-205ENST00000405655 PANK3Q9H999 370 aa19.32■□□□□ 0.68
PRAME-205ENST00000405655 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
PRAME-205ENST00000405655 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
PRAME-205ENST00000405655 TMF1P82094 1093 aa19.3■□□□□ 0.68
PRAME-205ENST00000405655 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
PRAME-205ENST00000405655 SCAF11Q99590 1463 aaKnown RBP19.3■□□□□ 0.68
PRAME-205ENST00000405655 CC2D1BQ5T0F9 858 aaKnown RBP19.29■□□□□ 0.68
PRAME-205ENST00000405655 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
PRAME-205ENST00000405655 MYOM2P54296 1465 aa19.29■□□□□ 0.68
PRAME-205ENST00000405655 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
PRAME-205ENST00000405655 NEURL4Q96JN8 1562 aa19.26■□□□□ 0.67
PRAME-205ENST00000405655 ZC3H13Q5T200 1668 aaKnown RBP19.26■□□□□ 0.67
PRAME-205ENST00000405655 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
PRAME-205ENST00000405655 KIAA1210Q9ULL0 1709 aa19.25■□□□□ 0.67
PRAME-205ENST00000405655 PIK3C2GO75747 1445 aa19.24■□□□□ 0.67
PRAME-205ENST00000405655 ARHGAP31Q2M1Z3 1444 aa19.24■□□□□ 0.67
PRAME-205ENST00000405655 NEXMIFQ5QGS0 1516 aa19.23■□□□□ 0.67
PRAME-205ENST00000405655 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
PRAME-205ENST00000405655 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
PRAME-205ENST00000405655 C14orf93Q9H972 538 aaKnown RBP19.23■□□□□ 0.67
PRAME-205ENST00000405655 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
PRAME-205ENST00000405655 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRAME-205ENST00000405655 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
PRAME-205ENST00000405655 ARHGEF40Q8TER5 1519 aa19.21■□□□□ 0.67
PRAME-205ENST00000405655 STK26Q9P289 416 aa19.2■□□□□ 0.66
PRAME-205ENST00000405655 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
PRAME-205ENST00000405655 ERVK-7P63135 1459 aa19.19■□□□□ 0.66
PRAME-205ENST00000405655 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
PRAME-205ENST00000405655 MYOM1P52179 1685 aa19.18■□□□□ 0.66
PRAME-205ENST00000405655 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
PRAME-205ENST00000405655 AGLP35573 1532 aa19.17■□□□□ 0.66
PRAME-205ENST00000405655 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
PRAME-205ENST00000405655 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
PRAME-205ENST00000405655 SUPT16HQ9Y5B9 1047 aaKnown RBP19.17■□□□□ 0.66
PRAME-205ENST00000405655 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
PRAME-205ENST00000405655 BCANQ96GW7 911 aa19.16■□□□□ 0.66
PRAME-205ENST00000405655 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
PRAME-205ENST00000405655 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
PRAME-205ENST00000405655 CEBPAP49715 358 aaPredicted RBP19.15■□□□□ 0.66
PRAME-205ENST00000405655 EIF3AQ14152 1382 aaKnown RBP19.14■□□□□ 0.66
PRAME-205ENST00000405655 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.66
PRAME-205ENST00000405655 MYBBP1AQ9BQG0 1328 aaKnown RBP19.14■□□□□ 0.65
PRAME-205ENST00000405655 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
PRAME-205ENST00000405655 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
PRAME-205ENST00000405655 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
PRAME-205ENST00000405655 ZMYM3Q14202 1370 aa19.12■□□□□ 0.65
PRAME-205ENST00000405655 RALBP1Q15311 655 aa19.12■□□□□ 0.65
PRAME-205ENST00000405655 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
PRAME-205ENST00000405655 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
PRAME-205ENST00000405655 IRX6P78412 446 aaPredicted RBP19.11■□□□□ 0.65
PRAME-205ENST00000405655 FKBP8Q14318 412 aa19.11■□□□□ 0.65
PRAME-205ENST00000405655 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
PRAME-205ENST00000405655 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
PRAME-205ENST00000405655 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
PRAME-205ENST00000405655 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
PRAME-205ENST00000405655 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
PRAME-205ENST00000405655 SLC12A5Q9H2X9 1139 aa19.09■□□□□ 0.65
PRAME-205ENST00000405655 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
PRAME-205ENST00000405655 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.65
PRAME-205ENST00000405655 MYO3AQ8NEV4 1616 aa19.08■□□□□ 0.64
PRAME-205ENST00000405655 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
PRAME-205ENST00000405655 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
PRAME-205ENST00000405655 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
PRAME-205ENST00000405655 BRD4O60885 1362 aaPredicted RBP19.05■□□□□ 0.64
PRAME-205ENST00000405655 CDCA8Q53HL2 280 aa19.05■□□□□ 0.64
PRAME-205ENST00000405655 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
PRAME-205ENST00000405655 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
PRAME-205ENST00000405655 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
PRAME-205ENST00000405655 ZBED9Q6R2W3 1325 aa19.03■□□□□ 0.64
PRAME-205ENST00000405655 PRAM1Q96QH2 718 aa19.02■□□□□ 0.64
PRAME-205ENST00000405655 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
PRAME-205ENST00000405655 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
PRAME-205ENST00000405655 TULP4Q9NRJ4 1543 aa19.01■□□□□ 0.63
PRAME-205ENST00000405655 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
PRAME-205ENST00000405655 WAPLQ7Z5K2 1190 aa19.01■□□□□ 0.63
PRAME-205ENST00000405655 ZFYVE9O95405 1425 aa19■□□□□ 0.63
PRAME-205ENST00000405655 PTPRMP28827 1452 aa19■□□□□ 0.63
PRAME-205ENST00000405655 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
PRAME-205ENST00000405655 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
PRAME-205ENST00000405655 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
PRAME-205ENST00000405655 PLEKHH1Q9ULM0 1364 aa18.98■□□□□ 0.63
PRAME-205ENST00000405655 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
PRAME-205ENST00000405655 TNRQ92752 1358 aa18.97■□□□□ 0.63
PRAME-205ENST00000405655 POGKQ9P215 609 aa18.96■□□□□ 0.63
PRAME-205ENST00000405655 NSD3Q9BZ95 1437 aa18.95■□□□□ 0.62
PRAME-205ENST00000405655 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
PRAME-205ENST00000405655 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
PRAME-205ENST00000405655 METP08581 1390 aa18.94■□□□□ 0.62
PRAME-205ENST00000405655 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
PRAME-205ENST00000405655 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
PRAME-205ENST00000405655 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms