RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 ZNF335Q9H4Z2 1342 aaPredicted RBP25.85■■□□□ 1.73
SMIM11A-202ENST00000399295 RIMS2Q9UQ26 1411 aa25.82■■□□□ 1.72
SMIM11A-202ENST00000399295 LTBP4Q8N2S1 1624 aa25.82■■□□□ 1.72
SMIM11A-202ENST00000399295 IQGAP1P46940 1657 aa25.82■■□□□ 1.72
SMIM11A-202ENST00000399295 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMIM11A-202ENST00000399295 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
SMIM11A-202ENST00000399295 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
SMIM11A-202ENST00000399295 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
SMIM11A-202ENST00000399295 ZNF326Q5BKZ1 582 aaKnown RBP25.79■■□□□ 1.72
SMIM11A-202ENST00000399295 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
SMIM11A-202ENST00000399295 BCANQ96GW7 911 aa25.78■■□□□ 1.72
SMIM11A-202ENST00000399295 NUTM2DQ5VT03 806 aaPredicted RBP25.76■■□□□ 1.71
SMIM11A-202ENST00000399295 CPS1P31327 1500 aa25.74■■□□□ 1.71
SMIM11A-202ENST00000399295 SLC26A8Q96RN1 970 aa25.74■■□□□ 1.71
SMIM11A-202ENST00000399295 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
SMIM11A-202ENST00000399295 CCDC144AA2RUR9 1427 aa25.73■■□□□ 1.71
SMIM11A-202ENST00000399295 PLEKHG1Q9ULL1 1385 aa25.73■■□□□ 1.71
SMIM11A-202ENST00000399295 KIF1BO60333 1816 aa25.68■■□□□ 1.7
SMIM11A-202ENST00000399295 RPGRIP1LQ68CZ1 1315 aa25.64■■□□□ 1.7
SMIM11A-202ENST00000399295 TBX22Q9Y458 520 aa25.64■■□□□ 1.7
SMIM11A-202ENST00000399295 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
SMIM11A-202ENST00000399295 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
SMIM11A-202ENST00000399295 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
SMIM11A-202ENST00000399295 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
SMIM11A-202ENST00000399295 KCNA6P17658 529 aa25.61■■□□□ 1.69
SMIM11A-202ENST00000399295 SPATA31E1Q6ZUB1 1445 aa25.61■■□□□ 1.69
SMIM11A-202ENST00000399295 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
SMIM11A-202ENST00000399295 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
SMIM11A-202ENST00000399295 LRRC7Q96NW7 1537 aa25.55■■□□□ 1.68
SMIM11A-202ENST00000399295 DIP2AQ14689 1571 aa25.54■■□□□ 1.68
SMIM11A-202ENST00000399295 SETBP1Q9Y6X0 1596 aa25.54■■□□□ 1.68
SMIM11A-202ENST00000399295 TOM1O60784 492 aa25.54■■□□□ 1.68
SMIM11A-202ENST00000399295 PIK3R4Q99570 1358 aa25.53■■□□□ 1.68
SMIM11A-202ENST00000399295 UBAP1LF5GYI3 381 aa25.51■■□□□ 1.67
SMIM11A-202ENST00000399295 PROSER2Q86WR7 435 aaPredicted RBP25.51■■□□□ 1.67
SMIM11A-202ENST00000399295 NRXN3Q9Y4C0 1643 aa25.49■■□□□ 1.67
SMIM11A-202ENST00000399295 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
SMIM11A-202ENST00000399295 ADGRF5Q8IZF2 1346 aa25.48■■□□□ 1.67
SMIM11A-202ENST00000399295 PPLO60437 1756 aa25.48■■□□□ 1.67
SMIM11A-202ENST00000399295 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
SMIM11A-202ENST00000399295 AMOTL2Q9Y2J4 779 aa25.47■■□□□ 1.67
SMIM11A-202ENST00000399295 METP08581 1390 aa25.46■■□□□ 1.67
SMIM11A-202ENST00000399295 TMEM94Q12767 1356 aa25.46■■□□□ 1.67
SMIM11A-202ENST00000399295 CHD2O14647 1828 aaKnown RBP25.45■■□□□ 1.66
SMIM11A-202ENST00000399295 RBM33Q96EV2 1170 aaKnown RBP25.45■■□□□ 1.66
SMIM11A-202ENST00000399295 PTPRUQ92729 1446 aa25.44■■□□□ 1.66
SMIM11A-202ENST00000399295 NCOA3Q9Y6Q9 1424 aa25.43■■□□□ 1.66
SMIM11A-202ENST00000399295 ALKQ9UM73 1620 aa25.41■■□□□ 1.66
SMIM11A-202ENST00000399295 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
SMIM11A-202ENST00000399295 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
SMIM11A-202ENST00000399295 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
SMIM11A-202ENST00000399295 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
SMIM11A-202ENST00000399295 PIP4K2BP78356 416 aa25.37■■□□□ 1.65
SMIM11A-202ENST00000399295 MYOM2P54296 1465 aa25.36■■□□□ 1.65
SMIM11A-202ENST00000399295 C14orf37Q86TY3 774 aa25.36■■□□□ 1.65
SMIM11A-202ENST00000399295 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
SMIM11A-202ENST00000399295 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
SMIM11A-202ENST00000399295 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
SMIM11A-202ENST00000399295 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
SMIM11A-202ENST00000399295 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
SMIM11A-202ENST00000399295 MSH6P52701 1360 aa25.33■■□□□ 1.65
SMIM11A-202ENST00000399295 XRN1Q8IZH2 1706 aaKnown RBP25.33■■□□□ 1.65
SMIM11A-202ENST00000399295 C14orf93Q9H972 538 aaKnown RBP25.33■■□□□ 1.65
SMIM11A-202ENST00000399295 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
SMIM11A-202ENST00000399295 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
SMIM11A-202ENST00000399295 CFAP70Q5T0N1 1121 aa25.3■■□□□ 1.64
SMIM11A-202ENST00000399295 TMEM132EQ6IEE7 984 aa25.3■■□□□ 1.64
SMIM11A-202ENST00000399295 C19orf44Q9H6X5 657 aa25.29■■□□□ 1.64
SMIM11A-202ENST00000399295 NEUROD1Q13562 356 aa25.28■■□□□ 1.64
SMIM11A-202ENST00000399295 STK26Q9P289 416 aa25.27■■□□□ 1.64
SMIM11A-202ENST00000399295 ROBO2Q9HCK4 1378 aa25.26■■□□□ 1.63
SMIM11A-202ENST00000399295 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
SMIM11A-202ENST00000399295 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
SMIM11A-202ENST00000399295 FAM135BQ49AJ0 1406 aa25.24■■□□□ 1.63
SMIM11A-202ENST00000399295 PRAG1Q86YV5 1406 aa25.24■■□□□ 1.63
SMIM11A-202ENST00000399295 ATF3P18847 181 aa25.24■■□□□ 1.63
SMIM11A-202ENST00000399295 CADPS2Q86UW7 1296 aa25.23■■□□□ 1.63
SMIM11A-202ENST00000399295 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
SMIM11A-202ENST00000399295 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
SMIM11A-202ENST00000399295 DISP3Q9P2K9 1392 aa25.22■■□□□ 1.63
SMIM11A-202ENST00000399295 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
SMIM11A-202ENST00000399295 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
SMIM11A-202ENST00000399295 YTHDC2Q9H6S0 1430 aaKnown RBP25.21■■□□□ 1.63
SMIM11A-202ENST00000399295 L3MBTL2Q969R5 705 aa25.21■■□□□ 1.63
SMIM11A-202ENST00000399295 LAMC1P11047 1609 aa25.2■■□□□ 1.62
SMIM11A-202ENST00000399295 TECPR2O15040 1411 aa25.2■■□□□ 1.62
SMIM11A-202ENST00000399295 ADGRL3Q9HAR2 1447 aa25.19■■□□□ 1.62
SMIM11A-202ENST00000399295 HSPA1LP34931 641 aa25.18■■□□□ 1.62
SMIM11A-202ENST00000399295 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
SMIM11A-202ENST00000399295 DCCP43146 1447 aa25.18■■□□□ 1.62
SMIM11A-202ENST00000399295 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
SMIM11A-202ENST00000399295 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
SMIM11A-202ENST00000399295 ILDR2Q71H61 639 aa25.15■■□□□ 1.62
SMIM11A-202ENST00000399295 SIRT1Q96EB6 747 aa25.15■■□□□ 1.62
SMIM11A-202ENST00000399295 ADGRB1O14514 1584 aa25.13■■□□□ 1.61
SMIM11A-202ENST00000399295 SOCS7O14512 581 aa25.12■■□□□ 1.61
SMIM11A-202ENST00000399295 PLEKHH1Q9ULM0 1364 aa25.11■■□□□ 1.61
SMIM11A-202ENST00000399295 TRAK1Q9UPV9 953 aa25.11■■□□□ 1.61
SMIM11A-202ENST00000399295 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
SMIM11A-202ENST00000399295 KNDC1Q76NI1 1749 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms