RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
SMIM11A-202ENST00000399295 CCDC180Q9P1Z9 1646 aa37.44■■■■□ 3.58
SMIM11A-202ENST00000399295 ABCC9O60706 1549 aa36.71■■■■□ 3.47
SMIM11A-202ENST00000399295 DCAF8L2P0C7V8 631 aa35.38■■■■□ 3.25
SMIM11A-202ENST00000399295 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
SMIM11A-202ENST00000399295 NACADO15069 1562 aa35.27■■■■□ 3.24
SMIM11A-202ENST00000399295 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
SMIM11A-202ENST00000399295 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
SMIM11A-202ENST00000399295 DCAF1Q9Y4B6 1507 aa34.9■■■■□ 3.18
SMIM11A-202ENST00000399295 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
SMIM11A-202ENST00000399295 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
SMIM11A-202ENST00000399295 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
SMIM11A-202ENST00000399295 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
SMIM11A-202ENST00000399295 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
SMIM11A-202ENST00000399295 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
SMIM11A-202ENST00000399295 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
SMIM11A-202ENST00000399295 CC2D2AQ9P2K1 1620 aa33.16■■■□□ 2.9
SMIM11A-202ENST00000399295 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
SMIM11A-202ENST00000399295 SMARCA4P51532 1647 aa32.71■■■□□ 2.83
SMIM11A-202ENST00000399295 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.82
SMIM11A-202ENST00000399295 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
SMIM11A-202ENST00000399295 NCAPD3P42695 1498 aa32.56■■■□□ 2.8
SMIM11A-202ENST00000399295 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
SMIM11A-202ENST00000399295 SMARCA2P51531 1590 aa32.51■■■□□ 2.79
SMIM11A-202ENST00000399295 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
SMIM11A-202ENST00000399295 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
SMIM11A-202ENST00000399295 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
SMIM11A-202ENST00000399295 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
SMIM11A-202ENST00000399295 WIZO95785 1651 aa32.15■■■□□ 2.74
SMIM11A-202ENST00000399295 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
SMIM11A-202ENST00000399295 NESP48681 1621 aa31.76■■■□□ 2.67
SMIM11A-202ENST00000399295 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
SMIM11A-202ENST00000399295 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
SMIM11A-202ENST00000399295 CADPSQ9ULU8 1353 aa31.63■■■□□ 2.65
SMIM11A-202ENST00000399295 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
SMIM11A-202ENST00000399295 CCDC88BA6NC98 1476 aa31.48■■■□□ 2.63
SMIM11A-202ENST00000399295 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
SMIM11A-202ENST00000399295 CUX2O14529 1486 aa31.46■■■□□ 2.63
SMIM11A-202ENST00000399295 CFTRP13569 1480 aa31.42■■■□□ 2.62
SMIM11A-202ENST00000399295 KIF21AQ7Z4S6 1674 aa31.31■■■□□ 2.6
SMIM11A-202ENST00000399295 FANCD2Q9BXW9 1451 aa31.25■■■□□ 2.59
SMIM11A-202ENST00000399295 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
SMIM11A-202ENST00000399295 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
SMIM11A-202ENST00000399295 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.58
SMIM11A-202ENST00000399295 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
SMIM11A-202ENST00000399295 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
SMIM11A-202ENST00000399295 WDR62O43379 1518 aa31.01■■■□□ 2.55
SMIM11A-202ENST00000399295 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
SMIM11A-202ENST00000399295 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
SMIM11A-202ENST00000399295 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
SMIM11A-202ENST00000399295 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
SMIM11A-202ENST00000399295 IFT140Q96RY7 1462 aa30.55■■■□□ 2.48
SMIM11A-202ENST00000399295 CUX1P39880 1505 aa30.51■■■□□ 2.47
SMIM11A-202ENST00000399295 POLA1P09884 1462 aaPredicted RBP30.48■■■□□ 2.47
SMIM11A-202ENST00000399295 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
SMIM11A-202ENST00000399295 ZNF608Q9ULD9 1512 aaPredicted RBP30.41■■■□□ 2.46
SMIM11A-202ENST00000399295 SOGA1O94964 1423 aa30.39■■■□□ 2.46
SMIM11A-202ENST00000399295 TARBP1Q13395 1621 aaKnown RBP30.37■■■□□ 2.45
SMIM11A-202ENST00000399295 RAD54L2Q9Y4B4 1467 aa30.37■■■□□ 2.45
SMIM11A-202ENST00000399295 WRNQ14191 1432 aaPredicted RBP eCLIP30.35■■■□□ 2.45
SMIM11A-202ENST00000399295 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
SMIM11A-202ENST00000399295 EIF4G3O43432 1585 aaKnown RBP30.24■■■□□ 2.43
SMIM11A-202ENST00000399295 TOP2BQ02880 1626 aa30.23■■■□□ 2.43
SMIM11A-202ENST00000399295 TDRD9Q8NDG6 1382 aaKnown RBP30.23■■■□□ 2.43
SMIM11A-202ENST00000399295 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
SMIM11A-202ENST00000399295 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
SMIM11A-202ENST00000399295 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.43
SMIM11A-202ENST00000399295 OSCARQ8IYS5 282 aa30.16■■■□□ 2.42
SMIM11A-202ENST00000399295 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SMIM11A-202ENST00000399295 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
SMIM11A-202ENST00000399295 GRIN2BQ13224 1484 aa30.01■■■□□ 2.4
SMIM11A-202ENST00000399295 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
SMIM11A-202ENST00000399295 FBLN2P98095 1184 aa29.96■■■□□ 2.39
SMIM11A-202ENST00000399295 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
SMIM11A-202ENST00000399295 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
SMIM11A-202ENST00000399295 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
SMIM11A-202ENST00000399295 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
SMIM11A-202ENST00000399295 CHD1O14646 1710 aa29.82■■■□□ 2.36
SMIM11A-202ENST00000399295 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
SMIM11A-202ENST00000399295 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
SMIM11A-202ENST00000399295 KIF27Q86VH2 1401 aa29.73■■■□□ 2.35
SMIM11A-202ENST00000399295 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
SMIM11A-202ENST00000399295 FHAD1B1AJZ9 1412 aa29.68■■■□□ 2.34
SMIM11A-202ENST00000399295 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
SMIM11A-202ENST00000399295 IGF1RP08069 1367 aa29.62■■■□□ 2.33
SMIM11A-202ENST00000399295 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
SMIM11A-202ENST00000399295 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
SMIM11A-202ENST00000399295 ARHGEF11O15085 1522 aa29.54■■■□□ 2.32
SMIM11A-202ENST00000399295 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
SMIM11A-202ENST00000399295 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
SMIM11A-202ENST00000399295 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
SMIM11A-202ENST00000399295 NUP160Q12769 1436 aa29.48■■■□□ 2.31
SMIM11A-202ENST00000399295 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
SMIM11A-202ENST00000399295 CUL7Q14999 1698 aa29.44■■■□□ 2.3
SMIM11A-202ENST00000399295 CEP170Q5SW79 1584 aa29.44■■■□□ 2.3
SMIM11A-202ENST00000399295 CARMIL1Q5VZK9 1371 aa29.44■■■□□ 2.3
SMIM11A-202ENST00000399295 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
SMIM11A-202ENST00000399295 CYB5RLQ6IPT4 315 aa29.31■■■□□ 2.28
SMIM11A-202ENST00000399295 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
SMIM11A-202ENST00000399295 JPH4Q96JJ6 628 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms