RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 TET3O43151 1660 aa12.67□□□□□ -0.38
BRCC3-205ENST00000399026 NPATQ14207 1427 aa12.67□□□□□ -0.38
BRCC3-205ENST00000399026 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
BRCC3-205ENST00000399026 LMTK2Q8IWU2 1503 aa12.67□□□□□ -0.38
BRCC3-205ENST00000399026 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
BRCC3-205ENST00000399026 CEP170BQ9Y4F5 1589 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-205ENST00000399026 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
BRCC3-205ENST00000399026 KANK1Q14678 1352 aa12.66□□□□□ -0.38
BRCC3-205ENST00000399026 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
BRCC3-205ENST00000399026 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
BRCC3-205ENST00000399026 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-205ENST00000399026 E9PCH4 1651 aa12.64□□□□□ -0.39
BRCC3-205ENST00000399026 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-205ENST00000399026 SYNMO15061 1565 aa12.62□□□□□ -0.39
BRCC3-205ENST00000399026 TNRQ92752 1358 aa12.62□□□□□ -0.39
BRCC3-205ENST00000399026 HSPA2P54652 639 aa12.62□□□□□ -0.39
BRCC3-205ENST00000399026 SETD1BQ9UPS6 1966 aaKnown RBP12.61□□□□□ -0.39
BRCC3-205ENST00000399026 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
BRCC3-205ENST00000399026 LHX8Q68G74 356 aa12.6□□□□□ -0.39
BRCC3-205ENST00000399026 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
BRCC3-205ENST00000399026 PIK3C2BO00750 1634 aa12.59□□□□□ -0.39
BRCC3-205ENST00000399026 STRCQ7RTU9 1775 aa12.58□□□□□ -0.39
BRCC3-205ENST00000399026 NUP155O75694 1391 aa12.58□□□□□ -0.4
BRCC3-205ENST00000399026 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
BRCC3-205ENST00000399026 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
BRCC3-205ENST00000399026 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-205ENST00000399026 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
BRCC3-205ENST00000399026 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
BRCC3-205ENST00000399026 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
BRCC3-205ENST00000399026 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
BRCC3-205ENST00000399026 NOS1P29475 1434 aa12.55□□□□□ -0.4
BRCC3-205ENST00000399026 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
BRCC3-205ENST00000399026 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
BRCC3-205ENST00000399026 MIER1Q8N108 512 aa12.54□□□□□ -0.4
BRCC3-205ENST00000399026 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
BRCC3-205ENST00000399026 RAB3GAP2Q9H2M9 1393 aa12.53□□□□□ -0.4
BRCC3-205ENST00000399026 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.4
BRCC3-205ENST00000399026 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
BRCC3-205ENST00000399026 PLA2R1Q13018 1463 aa12.52□□□□□ -0.41
BRCC3-205ENST00000399026 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
BRCC3-205ENST00000399026 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
BRCC3-205ENST00000399026 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
BRCC3-205ENST00000399026 TRPM2O94759 1503 aa12.51□□□□□ -0.41
BRCC3-205ENST00000399026 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
BRCC3-205ENST00000399026 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
BRCC3-205ENST00000399026 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
BRCC3-205ENST00000399026 CLCN6P51797 869 aa12.47□□□□□ -0.41
BRCC3-205ENST00000399026 SLIT1O75093 1534 aa12.47□□□□□ -0.41
BRCC3-205ENST00000399026 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
BRCC3-205ENST00000399026 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.42
BRCC3-205ENST00000399026 PTPRTO14522 1441 aa12.45□□□□□ -0.42
BRCC3-205ENST00000399026 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
BRCC3-205ENST00000399026 POTEIP0CG38 1075 aa12.45□□□□□ -0.42
BRCC3-205ENST00000399026 PKD2Q13563 968 aa12.45□□□□□ -0.42
BRCC3-205ENST00000399026 KIF1BO60333 1816 aa12.45□□□□□ -0.42
BRCC3-205ENST00000399026 IDI1Q13907 227 aa12.44□□□□□ -0.42
BRCC3-205ENST00000399026 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
BRCC3-205ENST00000399026 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
BRCC3-205ENST00000399026 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-205ENST00000399026 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-205ENST00000399026 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
BRCC3-205ENST00000399026 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
BRCC3-205ENST00000399026 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
BRCC3-205ENST00000399026 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
BRCC3-205ENST00000399026 MED14O60244 1454 aa12.4□□□□□ -0.42
BRCC3-205ENST00000399026 ZFYVE9O95405 1425 aa12.4□□□□□ -0.42
BRCC3-205ENST00000399026 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
BRCC3-205ENST00000399026 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
BRCC3-205ENST00000399026 NEXMIFQ5QGS0 1516 aa12.38□□□□□ -0.43
BRCC3-205ENST00000399026 LTKP29376 864 aa12.38□□□□□ -0.43
BRCC3-205ENST00000399026 ANKLE2Q86XL3 938 aa12.38□□□□□ -0.43
BRCC3-205ENST00000399026 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-205ENST00000399026 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
BRCC3-205ENST00000399026 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 STRCP1A6NGW2 1772 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 PPLO60437 1756 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
BRCC3-205ENST00000399026 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-205ENST00000399026 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-205ENST00000399026 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
BRCC3-205ENST00000399026 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
BRCC3-205ENST00000399026 ZNF335Q9H4Z2 1342 aaPredicted RBP12.35□□□□□ -0.43
BRCC3-205ENST00000399026 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
BRCC3-205ENST00000399026 ACIN1Q9UKV3 1341 aaKnown RBP12.34□□□□□ -0.43
BRCC3-205ENST00000399026 PPP1R15AO75807 674 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-205ENST00000399026 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
BRCC3-205ENST00000399026 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
BRCC3-205ENST00000399026 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
BRCC3-205ENST00000399026 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
BRCC3-205ENST00000399026 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
BRCC3-205ENST00000399026 DIP2AQ14689 1571 aa12.31□□□□□ -0.44
BRCC3-205ENST00000399026 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
BRCC3-205ENST00000399026 SETBP1Q9Y6X0 1596 aa12.31□□□□□ -0.44
BRCC3-205ENST00000399026 HRCP23327 699 aa12.31□□□□□ -0.44
BRCC3-205ENST00000399026 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
BRCC3-205ENST00000399026 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
BRCC3-205ENST00000399026 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
BRCC3-205ENST00000399026 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms