RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NOP58Q9Y2X3 529 aaKnown RBP34.06■■■■□ 3.04
COL13A1-203ENST00000398969 MAP3K4Q9Y6R4 1608 aa34.06■■■■□ 3.04
COL13A1-203ENST00000398969 TET3O43151 1660 aa34.05■■■■□ 3.04
COL13A1-203ENST00000398969 MROH1Q8NDA8 1641 aa34.04■■■■□ 3.04
COL13A1-203ENST00000398969 GLI2P10070 1586 aa34.03■■■■□ 3.04
COL13A1-203ENST00000398969 HECW2Q9P2P5 1572 aa34.03■■■■□ 3.04
COL13A1-203ENST00000398969 CDCA7LQ96GN5 454 aa34.02■■■■□ 3.04
COL13A1-203ENST00000398969 MADDQ8WXG6 1647 aa34.01■■■■□ 3.04
COL13A1-203ENST00000398969 PTPRTO14522 1441 aa34■■■■□ 3.03
COL13A1-203ENST00000398969 TRPM2O94759 1503 aa33.99■■■■□ 3.03
COL13A1-203ENST00000398969 RAPGEF3O95398 923 aa33.98■■■■□ 3.03
COL13A1-203ENST00000398969 IQGAP1P46940 1657 aa33.97■■■■□ 3.03
COL13A1-203ENST00000398969 SPHKAPQ2M3C7 1700 aa33.97■■■■□ 3.03
COL13A1-203ENST00000398969 ANP32AP39687 249 aaKnown RBP33.96■■■■□ 3.03
COL13A1-203ENST00000398969 PAK3O75914 559 aaPredicted RBP33.95■■■■□ 3.02
COL13A1-203ENST00000398969 FRMPD1Q5SYB0 1578 aa33.95■■■■□ 3.02
COL13A1-203ENST00000398969 BCL11AQ9H165 835 aa33.93■■■■□ 3.02
COL13A1-203ENST00000398969 IPO9Q96P70 1041 aaKnown RBP33.92■■■■□ 3.02
COL13A1-203ENST00000398969 ABCA6Q8N139 1617 aa33.92■■■■□ 3.02
COL13A1-203ENST00000398969 CEP152O94986 1710 aa33.91■■■■□ 3.02
COL13A1-203ENST00000398969 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
COL13A1-203ENST00000398969 DIP2BQ9P265 1576 aa33.89■■■■□ 3.02
COL13A1-203ENST00000398969 RICTORQ6R327 1708 aa33.88■■■■□ 3.01
COL13A1-203ENST00000398969 TCERG1O14776 1098 aaKnown RBP33.87■■■■□ 3.01
COL13A1-203ENST00000398969 CLTCL1P53675 1640 aa33.87■■■■□ 3.01
COL13A1-203ENST00000398969 LMTK2Q8IWU2 1503 aa33.87■■■■□ 3.01
COL13A1-203ENST00000398969 EFCAB6Q5THR3 1501 aa33.86■■■■□ 3.01
COL13A1-203ENST00000398969 SCAF11Q99590 1463 aaKnown RBP33.85■■■■□ 3.01
COL13A1-203ENST00000398969 SYNMO15061 1565 aa33.85■■■■□ 3.01
COL13A1-203ENST00000398969 KNSTRNQ9Y448 316 aa33.84■■■■□ 3.01
COL13A1-203ENST00000398969 ADAMTS8Q9UP79 889 aa33.83■■■■□ 3.01
COL13A1-203ENST00000398969 STAC3Q96MF2 364 aa33.83■■■■□ 3.01
COL13A1-203ENST00000398969 PPRC1Q5VV67 1664 aaKnown RBP33.82■■■■□ 3
COL13A1-203ENST00000398969 PLIN1O60240 522 aa33.81■■■■□ 3
COL13A1-203ENST00000398969 PPP2R1AP30153 589 aa33.81■■■■□ 3
COL13A1-203ENST00000398969 DIP2CQ9Y2E4 1556 aa33.8■■■■□ 3
COL13A1-203ENST00000398969 AMER1Q5JTC6 1135 aaPredicted RBP33.8■■■■□ 3
COL13A1-203ENST00000398969 CDCA8Q53HL2 280 aa33.79■■■■□ 3
COL13A1-203ENST00000398969 GGT6Q6P531 493 aa33.79■■■■□ 3
COL13A1-203ENST00000398969 ZBTB47Q9UFB7 747 aaPredicted RBP33.76■■■■□ 3
COL13A1-203ENST00000398969 ASXL1Q8IXJ9 1541 aa33.75■■■□□ 2.99
COL13A1-203ENST00000398969 MYOM1P52179 1685 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 MS4A1P11836 297 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 CRBNQ96SW2 442 aa33.74■■■□□ 2.99
COL13A1-203ENST00000398969 PDE4AP27815 886 aa33.73■■■□□ 2.99
COL13A1-203ENST00000398969 WDR43Q15061 677 aaKnown RBP eCLIP33.73■■■□□ 2.99
COL13A1-203ENST00000398969 NEURL4Q96JN8 1562 aa33.73■■■□□ 2.99
COL13A1-203ENST00000398969 YEATS2Q9ULM3 1422 aa33.72■■■□□ 2.99
COL13A1-203ENST00000398969 PLEKHH1Q9ULM0 1364 aa33.72■■■□□ 2.99
COL13A1-203ENST00000398969 KIAA1210Q9ULL0 1709 aa33.71■■■□□ 2.99
COL13A1-203ENST00000398969 UGGT1Q9NYU2 1555 aa33.71■■■□□ 2.99
COL13A1-203ENST00000398969 TSPOAP1O95153 1857 aa33.7■■■□□ 2.99
COL13A1-203ENST00000398969 NBR1Q14596 966 aa33.7■■■□□ 2.99
COL13A1-203ENST00000398969 EIF3AQ14152 1382 aaKnown RBP33.7■■■□□ 2.98
COL13A1-203ENST00000398969 PIK3C2GO75747 1445 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 BACH2Q9BYV9 841 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 NPATQ14207 1427 aa33.69■■■□□ 2.98
COL13A1-203ENST00000398969 ABCC3O15438 1527 aa33.68■■■□□ 2.98
COL13A1-203ENST00000398969 NPC1L1Q9UHC9 1359 aa33.68■■■□□ 2.98
COL13A1-203ENST00000398969 ZNF521Q96K83 1311 aa33.67■■■□□ 2.98
COL13A1-203ENST00000398969 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
COL13A1-203ENST00000398969 DEKP35659 375 aaKnown RBP33.65■■■□□ 2.98
COL13A1-203ENST00000398969 DUSP27Q5VZP5 1158 aa33.65■■■□□ 2.98
COL13A1-203ENST00000398969 KIF1BO60333 1816 aa33.64■■■□□ 2.98
COL13A1-203ENST00000398969 C20orf194Q5TEA3 1177 aa33.63■■■□□ 2.97
COL13A1-203ENST00000398969 NPM2Q86SE8 214 aaKnown RBP33.62■■■□□ 2.97
COL13A1-203ENST00000398969 MYOM2P54296 1465 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 GOLGA2Q08379 1002 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 CAMSAP1Q5T5Y3 1602 aa33.59■■■□□ 2.97
COL13A1-203ENST00000398969 CFAP65Q6ZU64 1925 aaKnown RBP33.59■■■□□ 2.97
COL13A1-203ENST00000398969 ERVK-7P63135 1459 aa33.55■■■□□ 2.96
COL13A1-203ENST00000398969 MROH2AA6NES4 1674 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 CFAP70Q5T0N1 1121 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 KIF13AQ9H1H9 1805 aa33.54■■■□□ 2.96
COL13A1-203ENST00000398969 KDM2BQ8NHM5 1336 aa33.53■■■□□ 2.96
COL13A1-203ENST00000398969 SKAP1Q86WV1 359 aa33.52■■■□□ 2.96
COL13A1-203ENST00000398969 ADGRB3O60242 1522 aa33.52■■■□□ 2.96
COL13A1-203ENST00000398969 SLC24A1O60721 1099 aa33.51■■■□□ 2.96
COL13A1-203ENST00000398969 SLFN5Q08AF3 891 aa33.51■■■□□ 2.96
COL13A1-203ENST00000398969 ZC3H13Q5T200 1668 aaKnown RBP33.51■■■□□ 2.96
COL13A1-203ENST00000398969 NOS1P29475 1434 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 ADGRF5Q8IZF2 1346 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 IFT172Q9UG01 1749 aa33.5■■■□□ 2.95
COL13A1-203ENST00000398969 ARHGAP31Q2M1Z3 1444 aa33.49■■■□□ 2.95
COL13A1-203ENST00000398969 SIGLEC1Q9BZZ2 1709 aa33.49■■■□□ 2.95
COL13A1-203ENST00000398969 CCDC146Q8IYE0 955 aa33.48■■■□□ 2.95
COL13A1-203ENST00000398969 TRMT2AQ8IZ69 625 aaKnown RBP33.47■■■□□ 2.95
COL13A1-203ENST00000398969 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.46■■■□□ 2.95
COL13A1-203ENST00000398969 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
COL13A1-203ENST00000398969 RTL5Q5HYW3 569 aaPredicted RBP33.45■■■□□ 2.94
COL13A1-203ENST00000398969 CENPQQ7L2Z9 268 aaPredicted RBP33.45■■■□□ 2.94
COL13A1-203ENST00000398969 NRXN1Q9ULB1 1477 aa33.44■■■□□ 2.94
COL13A1-203ENST00000398969 MYO3AQ8NEV4 1616 aa33.43■■■□□ 2.94
COL13A1-203ENST00000398969 CARD14Q9BXL6 1004 aa33.42■■■□□ 2.94
COL13A1-203ENST00000398969 REREQ9P2R6 1566 aa33.42■■■□□ 2.94
COL13A1-203ENST00000398969 APAF1O14727 1248 aa33.41■■■□□ 2.94
COL13A1-203ENST00000398969 PIK3C2BO00750 1634 aa33.4■■■□□ 2.94
COL13A1-203ENST00000398969 NKTRP30414 1462 aaKnown RBP33.39■■■□□ 2.94
COL13A1-203ENST00000398969 SPINK5Q9NQ38 1064 aaPredicted RBP33.39■■■□□ 2.94
COL13A1-203ENST00000398969 SBNO2Q9Y2G9 1366 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms