RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
CYLD-202ENST00000398568 ARHGEF12Q9NZN5 1544 aa19.25■□□□□ 0.67
CYLD-202ENST00000398568 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
CYLD-202ENST00000398568 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
CYLD-202ENST00000398568 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
CYLD-202ENST00000398568 UPF2Q9HAU5 1272 aaKnown RBP19.22■□□□□ 0.67
CYLD-202ENST00000398568 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
CYLD-202ENST00000398568 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
CYLD-202ENST00000398568 GLI2P10070 1586 aa19.21■□□□□ 0.67
CYLD-202ENST00000398568 SAMD9LQ8IVG5 1584 aa19.21■□□□□ 0.67
CYLD-202ENST00000398568 PREX2Q70Z35 1606 aa19.2■□□□□ 0.66
CYLD-202ENST00000398568 MCM4P33991 863 aa19.2■□□□□ 0.66
CYLD-202ENST00000398568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
CYLD-202ENST00000398568 GRPEL1Q9HAV7 217 aa19.18■□□□□ 0.66
CYLD-202ENST00000398568 TRAK2O60296 914 aa19.17■□□□□ 0.66
CYLD-202ENST00000398568 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
CYLD-202ENST00000398568 AAMPQ13685 434 aa19.16■□□□□ 0.66
CYLD-202ENST00000398568 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
CYLD-202ENST00000398568 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
CYLD-202ENST00000398568 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
CYLD-202ENST00000398568 USP19O94966 1318 aa19.15■□□□□ 0.66
CYLD-202ENST00000398568 GCC2Q8IWJ2 1684 aa19.15■□□□□ 0.66
CYLD-202ENST00000398568 ABCC5O15440 1437 aa19.15■□□□□ 0.66
CYLD-202ENST00000398568 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.66
CYLD-202ENST00000398568 PRDM4Q9UKN5 801 aa19.14■□□□□ 0.65
CYLD-202ENST00000398568 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
CYLD-202ENST00000398568 GGT6Q6P531 493 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 MAP7D2Q96T17 732 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 NEO1Q92859 1461 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
CYLD-202ENST00000398568 SPRYD3Q8NCJ5 442 aa19.12■□□□□ 0.65
CYLD-202ENST00000398568 ERBB4Q15303 1308 aa19.12■□□□□ 0.65
CYLD-202ENST00000398568 DAPK1P53355 1430 aa19.12■□□□□ 0.65
CYLD-202ENST00000398568 KDM6BO15054 1643 aa19.11■□□□□ 0.65
CYLD-202ENST00000398568 MAPK8IP3Q9UPT6 1336 aa19.1■□□□□ 0.65
CYLD-202ENST00000398568 ABCC1P33527 1531 aa19.1■□□□□ 0.65
CYLD-202ENST00000398568 KIF3BO15066 747 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 SEC24BO95487 1268 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 CHMP5Q9NZZ3 219 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 FGD1P98174 961 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
CYLD-202ENST00000398568 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.65
CYLD-202ENST00000398568 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.64
CYLD-202ENST00000398568 PLEKHH2Q8IVE3 1493 aa19.07■□□□□ 0.64
CYLD-202ENST00000398568 ZNF518AQ6AHZ1 1483 aa19.06■□□□□ 0.64
CYLD-202ENST00000398568 ANP32BQ92688 251 aaKnown RBP19.06■□□□□ 0.64
CYLD-202ENST00000398568 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
CYLD-202ENST00000398568 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
CYLD-202ENST00000398568 ST20-MTHFSA0A0A6YYL1 179 aa19.05■□□□□ 0.64
CYLD-202ENST00000398568 RSPH4AQ5TD94 716 aa19.05■□□□□ 0.64
CYLD-202ENST00000398568 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.05■□□□□ 0.64
CYLD-202ENST00000398568 MSNP26038 577 aaKnown RBP19.04■□□□□ 0.64
CYLD-202ENST00000398568 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
CYLD-202ENST00000398568 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
CYLD-202ENST00000398568 INSRP06213 1382 aa19.02■□□□□ 0.64
CYLD-202ENST00000398568 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.64
CYLD-202ENST00000398568 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
CYLD-202ENST00000398568 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.63
CYLD-202ENST00000398568 KDM5CP41229 1560 aa19.01■□□□□ 0.63
CYLD-202ENST00000398568 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
CYLD-202ENST00000398568 TBC1D32Q96NH3 1257 aa19.01■□□□□ 0.63
CYLD-202ENST00000398568 BLMP54132 1417 aaPredicted RBP19.01■□□□□ 0.63
CYLD-202ENST00000398568 OFD1O75665 1012 aa19■□□□□ 0.63
CYLD-202ENST00000398568 DUSP27Q5VZP5 1158 aa19■□□□□ 0.63
CYLD-202ENST00000398568 EIF3AQ14152 1382 aaKnown RBP19■□□□□ 0.63
CYLD-202ENST00000398568 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
CYLD-202ENST00000398568 TERF1P54274 439 aa18.99■□□□□ 0.63
CYLD-202ENST00000398568 PDE4CQ08493 712 aa18.99■□□□□ 0.63
CYLD-202ENST00000398568 ZSCAN30Q86W11 494 aa18.99■□□□□ 0.63
CYLD-202ENST00000398568 IGHDP01880 384 aa18.99■□□□□ 0.63
CYLD-202ENST00000398568 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
CYLD-202ENST00000398568 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
CYLD-202ENST00000398568 CCDC173Q0VFZ6 552 aa18.98■□□□□ 0.63
CYLD-202ENST00000398568 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
CYLD-202ENST00000398568 MTERF4Q7Z6M4 381 aaKnown RBP18.97■□□□□ 0.63
CYLD-202ENST00000398568 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
CYLD-202ENST00000398568 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
CYLD-202ENST00000398568 R3HCC1Q9Y3T6 440 aaKnown RBP18.96■□□□□ 0.63
CYLD-202ENST00000398568 ATP7AQ04656 1500 aa18.96■□□□□ 0.63
CYLD-202ENST00000398568 KDM2AQ9Y2K7 1162 aa18.96■□□□□ 0.63
CYLD-202ENST00000398568 RIPK4P57078 832 aa18.95■□□□□ 0.62
CYLD-202ENST00000398568 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
CYLD-202ENST00000398568 NCLP19338 710 aaKnown RBP18.94■□□□□ 0.62
CYLD-202ENST00000398568 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
CYLD-202ENST00000398568 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
CYLD-202ENST00000398568 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
CYLD-202ENST00000398568 CGNL1Q0VF96 1302 aa18.94■□□□□ 0.62
CYLD-202ENST00000398568 ARID3AQ99856 593 aa18.94■□□□□ 0.62
CYLD-202ENST00000398568 HSCBQ8IWL3 235 aa18.94■□□□□ 0.62
CYLD-202ENST00000398568 SKOR2Q2VWA4 1001 aaPredicted RBP18.93■□□□□ 0.62
CYLD-202ENST00000398568 ROCK1Q13464 1354 aa18.93■□□□□ 0.62
CYLD-202ENST00000398568 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
CYLD-202ENST00000398568 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
CYLD-202ENST00000398568 ZFYVE16Q7Z3T8 1539 aa18.92■□□□□ 0.62
CYLD-202ENST00000398568 GBP4Q96PP9 640 aa18.92■□□□□ 0.62
CYLD-202ENST00000398568 RALGAPBQ86X10 1494 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms