RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
PDE1C-205ENST00000396191 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
PDE1C-205ENST00000396191 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
PDE1C-205ENST00000396191 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
PDE1C-205ENST00000396191 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
PDE1C-205ENST00000396191 NLRP1Q9C000 1473 aa17.6■□□□□ 0.41
PDE1C-205ENST00000396191 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
PDE1C-205ENST00000396191 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
PDE1C-205ENST00000396191 WDR62O43379 1518 aa17.6■□□□□ 0.41
PDE1C-205ENST00000396191 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
PDE1C-205ENST00000396191 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
PDE1C-205ENST00000396191 FAM13BQ9NYF5 915 aa17.59■□□□□ 0.41
PDE1C-205ENST00000396191 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
PDE1C-205ENST00000396191 CHMP5Q9NZZ3 219 aa17.58■□□□□ 0.41
PDE1C-205ENST00000396191 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
PDE1C-205ENST00000396191 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
PDE1C-205ENST00000396191 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
PDE1C-205ENST00000396191 CUL7Q14999 1698 aa17.57■□□□□ 0.4
PDE1C-205ENST00000396191 TESK2Q96S53 571 aa17.57■□□□□ 0.4
PDE1C-205ENST00000396191 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
PDE1C-205ENST00000396191 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
PDE1C-205ENST00000396191 E9PCH4 1651 aa17.56■□□□□ 0.4
PDE1C-205ENST00000396191 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
PDE1C-205ENST00000396191 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
PDE1C-205ENST00000396191 C22orf23Q9BZE7 217 aa17.55■□□□□ 0.4
PDE1C-205ENST00000396191 RLBP1P12271 317 aa17.55■□□□□ 0.4
PDE1C-205ENST00000396191 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
PDE1C-205ENST00000396191 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
PDE1C-205ENST00000396191 ANKRD50Q9ULJ7 1429 aa17.53■□□□□ 0.4
PDE1C-205ENST00000396191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDE1C-205ENST00000396191 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
PDE1C-205ENST00000396191 CENPJQ9HC77 1338 aaPredicted RBP17.53■□□□□ 0.4
PDE1C-205ENST00000396191 PLEKHH2Q8IVE3 1493 aa17.53■□□□□ 0.4
PDE1C-205ENST00000396191 TPM2P07951 284 aa17.52■□□□□ 0.4
PDE1C-205ENST00000396191 TMF1P82094 1093 aa17.52■□□□□ 0.4
PDE1C-205ENST00000396191 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.39
PDE1C-205ENST00000396191 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
PDE1C-205ENST00000396191 PRDM4Q9UKN5 801 aa17.51■□□□□ 0.39
PDE1C-205ENST00000396191 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
PDE1C-205ENST00000396191 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
PDE1C-205ENST00000396191 RIPK4P57078 832 aa17.5■□□□□ 0.39
PDE1C-205ENST00000396191 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
PDE1C-205ENST00000396191 HSCBQ8IWL3 235 aa17.49■□□□□ 0.39
PDE1C-205ENST00000396191 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
PDE1C-205ENST00000396191 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
PDE1C-205ENST00000396191 DDX11L8A8MPP1 907 aa17.48■□□□□ 0.39
PDE1C-205ENST00000396191 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
PDE1C-205ENST00000396191 E9PSI1 815 aa17.48■□□□□ 0.39
PDE1C-205ENST00000396191 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
PDE1C-205ENST00000396191 PDE3AQ14432 1141 aa17.47■□□□□ 0.39
PDE1C-205ENST00000396191 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
PDE1C-205ENST00000396191 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
PDE1C-205ENST00000396191 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
PDE1C-205ENST00000396191 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.38
PDE1C-205ENST00000396191 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
PDE1C-205ENST00000396191 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
PDE1C-205ENST00000396191 MSNP26038 577 aaKnown RBP17.45■□□□□ 0.38
PDE1C-205ENST00000396191 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
PDE1C-205ENST00000396191 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
PDE1C-205ENST00000396191 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
PDE1C-205ENST00000396191 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
PDE1C-205ENST00000396191 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
PDE1C-205ENST00000396191 COL17A1Q9UMD9 1497 aaPredicted RBP17.44■□□□□ 0.38
PDE1C-205ENST00000396191 PRAG1Q86YV5 1406 aa17.43■□□□□ 0.38
PDE1C-205ENST00000396191 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
PDE1C-205ENST00000396191 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
PDE1C-205ENST00000396191 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
PDE1C-205ENST00000396191 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
PDE1C-205ENST00000396191 ZSCAN30Q86W11 494 aa17.42■□□□□ 0.38
PDE1C-205ENST00000396191 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
PDE1C-205ENST00000396191 RWDD1Q9H446 243 aaPredicted RBP17.41■□□□□ 0.38
PDE1C-205ENST00000396191 INSRP06213 1382 aa17.41■□□□□ 0.38
PDE1C-205ENST00000396191 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
PDE1C-205ENST00000396191 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
PDE1C-205ENST00000396191 OFD1O75665 1012 aa17.4■□□□□ 0.38
PDE1C-205ENST00000396191 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
PDE1C-205ENST00000396191 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
PDE1C-205ENST00000396191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.4■□□□□ 0.38
PDE1C-205ENST00000396191 CD2BP2O95400 341 aaKnown RBP17.39■□□□□ 0.37
PDE1C-205ENST00000396191 ANP32BQ92688 251 aaKnown RBP17.38■□□□□ 0.37
PDE1C-205ENST00000396191 UQCRHLA0A096LP55 91 aa17.38■□□□□ 0.37
PDE1C-205ENST00000396191 UQCRHP07919 91 aa17.38■□□□□ 0.37
PDE1C-205ENST00000396191 SSFA2P28290 1259 aa17.38■□□□□ 0.37
PDE1C-205ENST00000396191 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
PDE1C-205ENST00000396191 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
PDE1C-205ENST00000396191 GBP4Q96PP9 640 aa17.37■□□□□ 0.37
PDE1C-205ENST00000396191 CCDC173Q0VFZ6 552 aa17.37■□□□□ 0.37
PDE1C-205ENST00000396191 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
PDE1C-205ENST00000396191 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
PDE1C-205ENST00000396191 RTEL1-TNFRSF6BF6WH68 1400 aa17.36■□□□□ 0.37
PDE1C-205ENST00000396191 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
PDE1C-205ENST00000396191 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.35■□□□□ 0.37
PDE1C-205ENST00000396191 CDK11BP21127 795 aaKnown RBP17.34■□□□□ 0.37
PDE1C-205ENST00000396191 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
PDE1C-205ENST00000396191 NUP153P49790 1475 aaKnown RBP17.34■□□□□ 0.37
PDE1C-205ENST00000396191 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
PDE1C-205ENST00000396191 MPNDQ8N594 471 aa17.34■□□□□ 0.37
PDE1C-205ENST00000396191 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
PDE1C-205ENST00000396191 ISY1Q9ULR0 285 aaKnown RBP17.33■□□□□ 0.36
PDE1C-205ENST00000396191 TSC1Q92574 1164 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms