RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
PDE1C-205ENST00000396191 HRCP23327 699 aa23.53■■□□□ 1.36
PDE1C-205ENST00000396191 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
PDE1C-205ENST00000396191 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
PDE1C-205ENST00000396191 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
PDE1C-205ENST00000396191 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
PDE1C-205ENST00000396191 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
PDE1C-205ENST00000396191 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
PDE1C-205ENST00000396191 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
PDE1C-205ENST00000396191 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
PDE1C-205ENST00000396191 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
PDE1C-205ENST00000396191 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
PDE1C-205ENST00000396191 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
PDE1C-205ENST00000396191 MYT1Q01538 1121 aa22.14■■□□□ 1.13
PDE1C-205ENST00000396191 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
PDE1C-205ENST00000396191 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
PDE1C-205ENST00000396191 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
PDE1C-205ENST00000396191 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
PDE1C-205ENST00000396191 PRKCSHP14314 528 aaPredicted RBP21.8■■□□□ 1.08
PDE1C-205ENST00000396191 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
PDE1C-205ENST00000396191 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
PDE1C-205ENST00000396191 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
PDE1C-205ENST00000396191 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PDE1C-205ENST00000396191 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
PDE1C-205ENST00000396191 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
PDE1C-205ENST00000396191 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
PDE1C-205ENST00000396191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
PDE1C-205ENST00000396191 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
PDE1C-205ENST00000396191 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
PDE1C-205ENST00000396191 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
PDE1C-205ENST00000396191 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
PDE1C-205ENST00000396191 TRIM41Q8WV44 630 aa21.28■■□□□ 1
PDE1C-205ENST00000396191 APLP2Q06481 763 aa21.16■□□□□ 0.98
PDE1C-205ENST00000396191 ERICH6Q7L0X2 663 aa21.02■□□□□ 0.96
PDE1C-205ENST00000396191 ABCC9O60706 1549 aa20.93■□□□□ 0.94
PDE1C-205ENST00000396191 MIER1Q8N108 512 aa20.91■□□□□ 0.94
PDE1C-205ENST00000396191 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
PDE1C-205ENST00000396191 DAXXQ9UER7 740 aaPredicted RBP20.76■□□□□ 0.91
PDE1C-205ENST00000396191 BCL11AQ9H165 835 aa20.73■□□□□ 0.91
PDE1C-205ENST00000396191 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
PDE1C-205ENST00000396191 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
PDE1C-205ENST00000396191 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.88
PDE1C-205ENST00000396191 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
PDE1C-205ENST00000396191 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
PDE1C-205ENST00000396191 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
PDE1C-205ENST00000396191 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
PDE1C-205ENST00000396191 BCANQ96GW7 911 aa20.42■□□□□ 0.86
PDE1C-205ENST00000396191 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
PDE1C-205ENST00000396191 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
PDE1C-205ENST00000396191 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
PDE1C-205ENST00000396191 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
PDE1C-205ENST00000396191 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
PDE1C-205ENST00000396191 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
PDE1C-205ENST00000396191 FKBP8Q14318 412 aa20.11■□□□□ 0.81
PDE1C-205ENST00000396191 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
PDE1C-205ENST00000396191 ITGAEP38570 1179 aa20.08■□□□□ 0.81
PDE1C-205ENST00000396191 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.8
PDE1C-205ENST00000396191 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
PDE1C-205ENST00000396191 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
PDE1C-205ENST00000396191 SOGA1O94964 1423 aa20.05■□□□□ 0.8
PDE1C-205ENST00000396191 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
PDE1C-205ENST00000396191 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
PDE1C-205ENST00000396191 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
PDE1C-205ENST00000396191 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
PDE1C-205ENST00000396191 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
PDE1C-205ENST00000396191 WIZO95785 1651 aa19.95■□□□□ 0.78
PDE1C-205ENST00000396191 NACADO15069 1562 aa19.94■□□□□ 0.78
PDE1C-205ENST00000396191 MSH5O43196 834 aa19.93■□□□□ 0.78
PDE1C-205ENST00000396191 PLEKHG5O94827 1062 aa19.91■□□□□ 0.78
PDE1C-205ENST00000396191 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
PDE1C-205ENST00000396191 NEFLP07196 543 aa19.81■□□□□ 0.76
PDE1C-205ENST00000396191 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
PDE1C-205ENST00000396191 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
PDE1C-205ENST00000396191 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
PDE1C-205ENST00000396191 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
PDE1C-205ENST00000396191 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
PDE1C-205ENST00000396191 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
PDE1C-205ENST00000396191 CLIP1P30622 1438 aa19.68■□□□□ 0.74
PDE1C-205ENST00000396191 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDE1C-205ENST00000396191 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
PDE1C-205ENST00000396191 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
PDE1C-205ENST00000396191 ANO8Q9HCE9 1232 aaPredicted RBP19.58■□□□□ 0.73
PDE1C-205ENST00000396191 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
PDE1C-205ENST00000396191 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
PDE1C-205ENST00000396191 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
PDE1C-205ENST00000396191 NBR1Q14596 966 aa19.53■□□□□ 0.72
PDE1C-205ENST00000396191 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
PDE1C-205ENST00000396191 EEA1Q15075 1411 aa19.51■□□□□ 0.71
PDE1C-205ENST00000396191 SIN3AQ96ST3 1273 aa19.5■□□□□ 0.71
PDE1C-205ENST00000396191 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
PDE1C-205ENST00000396191 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
PDE1C-205ENST00000396191 FANCIQ9NVI1 1328 aa19.47■□□□□ 0.71
PDE1C-205ENST00000396191 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
PDE1C-205ENST00000396191 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
PDE1C-205ENST00000396191 ANP32CO43423 234 aa19.43■□□□□ 0.7
PDE1C-205ENST00000396191 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
PDE1C-205ENST00000396191 PPP1R15AO75807 674 aaPredicted RBP19.4■□□□□ 0.7
PDE1C-205ENST00000396191 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.7
PDE1C-205ENST00000396191 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.7
PDE1C-205ENST00000396191 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms