RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 A2MP01023 1474 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 APAF1O14727 1248 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
NFKB1-202ENST00000394820 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
NFKB1-202ENST00000394820 ARID3AQ99856 593 aa17.05■□□□□ 0.32
NFKB1-202ENST00000394820 PLCH2O75038 1416 aa17.04■□□□□ 0.32
NFKB1-202ENST00000394820 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
NFKB1-202ENST00000394820 KDM5CP41229 1560 aa17.03■□□□□ 0.32
NFKB1-202ENST00000394820 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
NFKB1-202ENST00000394820 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
NFKB1-202ENST00000394820 BECN1Q14457 450 aa17.03■□□□□ 0.32
NFKB1-202ENST00000394820 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
NFKB1-202ENST00000394820 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
NFKB1-202ENST00000394820 WASHC2CQ9Y4E1 1318 aa17.01■□□□□ 0.31
NFKB1-202ENST00000394820 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
NFKB1-202ENST00000394820 ABCC2Q92887 1545 aa17■□□□□ 0.31
NFKB1-202ENST00000394820 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
NFKB1-202ENST00000394820 CROCC2H7BZ55 1655 aa17■□□□□ 0.31
NFKB1-202ENST00000394820 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
NFKB1-202ENST00000394820 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
NFKB1-202ENST00000394820 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
NFKB1-202ENST00000394820 BCAR3O75815 825 aa16.99■□□□□ 0.31
NFKB1-202ENST00000394820 MLECQ14165 292 aa16.98■□□□□ 0.31
NFKB1-202ENST00000394820 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
NFKB1-202ENST00000394820 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
NFKB1-202ENST00000394820 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
NFKB1-202ENST00000394820 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
NFKB1-202ENST00000394820 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
NFKB1-202ENST00000394820 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
NFKB1-202ENST00000394820 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
NFKB1-202ENST00000394820 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
NFKB1-202ENST00000394820 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
NFKB1-202ENST00000394820 FANCAO15360 1455 aa16.95■□□□□ 0.3
NFKB1-202ENST00000394820 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
NFKB1-202ENST00000394820 PREX2Q70Z35 1606 aa16.95■□□□□ 0.3
NFKB1-202ENST00000394820 DUOX2Q9NRD8 1548 aa16.93■□□□□ 0.3
NFKB1-202ENST00000394820 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
NFKB1-202ENST00000394820 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
NFKB1-202ENST00000394820 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
NFKB1-202ENST00000394820 APBB1O00213 710 aa16.91■□□□□ 0.3
NFKB1-202ENST00000394820 PDE3BQ13370 1112 aa16.91■□□□□ 0.3
NFKB1-202ENST00000394820 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
NFKB1-202ENST00000394820 TRIM44Q96DX7 344 aaPredicted RBP16.91■□□□□ 0.3
NFKB1-202ENST00000394820 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
NFKB1-202ENST00000394820 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
NFKB1-202ENST00000394820 POGKQ9P215 609 aa16.9■□□□□ 0.3
NFKB1-202ENST00000394820 MS4A1P11836 297 aa16.89■□□□□ 0.29
NFKB1-202ENST00000394820 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
NFKB1-202ENST00000394820 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
NFKB1-202ENST00000394820 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
NFKB1-202ENST00000394820 CFAP65Q6ZU64 1925 aaKnown RBP16.88■□□□□ 0.29
NFKB1-202ENST00000394820 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
NFKB1-202ENST00000394820 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
NFKB1-202ENST00000394820 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
NFKB1-202ENST00000394820 MYO5CQ9NQX4 1742 aa16.87■□□□□ 0.29
NFKB1-202ENST00000394820 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
NFKB1-202ENST00000394820 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
NFKB1-202ENST00000394820 U2AF1L5P0DN76 240 aaPredicted RBP16.86■□□□□ 0.29
NFKB1-202ENST00000394820 U2AF1Q01081 240 aaKnown RBP eCLIP16.86■□□□□ 0.29
NFKB1-202ENST00000394820 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
NFKB1-202ENST00000394820 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
NFKB1-202ENST00000394820 ZCCHC11Q5TAX3 1644 aaKnown RBP16.84■□□□□ 0.29
NFKB1-202ENST00000394820 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
NFKB1-202ENST00000394820 GPRASP1Q5JY77 1395 aa16.84■□□□□ 0.29
NFKB1-202ENST00000394820 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
NFKB1-202ENST00000394820 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
NFKB1-202ENST00000394820 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.29
NFKB1-202ENST00000394820 ANP32BQ92688 251 aaKnown RBP16.83■□□□□ 0.28
NFKB1-202ENST00000394820 PNNQ9H307 717 aaKnown RBP16.83■□□□□ 0.28
NFKB1-202ENST00000394820 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
NFKB1-202ENST00000394820 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
NFKB1-202ENST00000394820 NOS1P29475 1434 aa16.82■□□□□ 0.28
NFKB1-202ENST00000394820 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
NFKB1-202ENST00000394820 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
NFKB1-202ENST00000394820 MAST1Q9Y2H9 1570 aa16.81■□□□□ 0.28
NFKB1-202ENST00000394820 ATP10AO60312 1499 aa16.81■□□□□ 0.28
NFKB1-202ENST00000394820 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
NFKB1-202ENST00000394820 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
NFKB1-202ENST00000394820 MTHFSP49914 203 aa16.8■□□□□ 0.28
NFKB1-202ENST00000394820 FOXD4L5Q5VV16 416 aaPredicted RBP16.8■□□□□ 0.28
NFKB1-202ENST00000394820 FOXD4L4Q8WXT5 416 aaPredicted RBP16.8■□□□□ 0.28
NFKB1-202ENST00000394820 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
NFKB1-202ENST00000394820 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
NFKB1-202ENST00000394820 ABCC1P33527 1531 aa16.79■□□□□ 0.28
NFKB1-202ENST00000394820 GOLGA6L3A6NEY3 463 aa16.79■□□□□ 0.28
NFKB1-202ENST00000394820 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
NFKB1-202ENST00000394820 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
NFKB1-202ENST00000394820 GLIPR1L2Q4G1C9 344 aa16.78■□□□□ 0.28
NFKB1-202ENST00000394820 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
NFKB1-202ENST00000394820 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
NFKB1-202ENST00000394820 SOX12O15370 315 aa16.77■□□□□ 0.28
NFKB1-202ENST00000394820 CFAP53Q96M91 514 aa16.77■□□□□ 0.28
NFKB1-202ENST00000394820 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.27
NFKB1-202ENST00000394820 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
NFKB1-202ENST00000394820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
NFKB1-202ENST00000394820 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
NFKB1-202ENST00000394820 IDI1Q13907 227 aa16.75■□□□□ 0.27
NFKB1-202ENST00000394820 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms