RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 MYOM2P54296 1465 aa25.32■■□□□ 1.64
SIL1-202ENST00000394817 MROH2AA6NES4 1674 aa25.32■■□□□ 1.64
SIL1-202ENST00000394817 CAMSAP1Q5T5Y3 1602 aa25.31■■□□□ 1.64
SIL1-202ENST00000394817 PARD3Q8TEW0 1356 aa25.3■■□□□ 1.64
SIL1-202ENST00000394817 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
SIL1-202ENST00000394817 SCAF11Q99590 1463 aaKnown RBP25.3■■□□□ 1.64
SIL1-202ENST00000394817 NPATQ14207 1427 aa25.29■■□□□ 1.64
SIL1-202ENST00000394817 TMF1P82094 1093 aa25.29■■□□□ 1.64
SIL1-202ENST00000394817 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
SIL1-202ENST00000394817 PNISRQ8TF01 805 aaKnown RBP25.28■■□□□ 1.64
SIL1-202ENST00000394817 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
SIL1-202ENST00000394817 PER1O15534 1290 aaPredicted RBP25.27■■□□□ 1.64
SIL1-202ENST00000394817 TMC1Q8TDI8 760 aa25.27■■□□□ 1.64
SIL1-202ENST00000394817 SIGLEC1Q9BZZ2 1709 aa25.26■■□□□ 1.63
SIL1-202ENST00000394817 ADGRB3O60242 1522 aa25.25■■□□□ 1.63
SIL1-202ENST00000394817 ZC3H13Q5T200 1668 aaKnown RBP25.24■■□□□ 1.63
SIL1-202ENST00000394817 SYNMO15061 1565 aa25.23■■□□□ 1.63
SIL1-202ENST00000394817 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
SIL1-202ENST00000394817 REREQ9P2R6 1566 aa25.21■■□□□ 1.63
SIL1-202ENST00000394817 SMG6Q86US8 1419 aaKnown RBP25.21■■□□□ 1.63
SIL1-202ENST00000394817 EIF3AQ14152 1382 aaKnown RBP25.2■■□□□ 1.62
SIL1-202ENST00000394817 MYOM1P52179 1685 aa25.2■■□□□ 1.62
SIL1-202ENST00000394817 NLRP13Q86W25 1043 aa25.2■■□□□ 1.62
SIL1-202ENST00000394817 PPLO60437 1756 aa25.19■■□□□ 1.62
SIL1-202ENST00000394817 ERICH6BQ5W0A0 696 aa25.19■■□□□ 1.62
SIL1-202ENST00000394817 ARHGEF40Q8TER5 1519 aa25.18■■□□□ 1.62
SIL1-202ENST00000394817 KDM5AP29375 1690 aaKnown RBP25.17■■□□□ 1.62
SIL1-202ENST00000394817 MYO3AQ8NEV4 1616 aa25.16■■□□□ 1.62
SIL1-202ENST00000394817 PANK3Q9H999 370 aa25.16■■□□□ 1.62
SIL1-202ENST00000394817 TSHZ2Q9NRE2 1034 aa25.16■■□□□ 1.62
SIL1-202ENST00000394817 AGLP35573 1532 aa25.15■■□□□ 1.62
SIL1-202ENST00000394817 NOS1P29475 1434 aa25.14■■□□□ 1.61
SIL1-202ENST00000394817 SETBP1Q9Y6X0 1596 aa25.14■■□□□ 1.61
SIL1-202ENST00000394817 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
SIL1-202ENST00000394817 ARHGAP31Q2M1Z3 1444 aa25.13■■□□□ 1.61
SIL1-202ENST00000394817 PIK3C2BO00750 1634 aa25.12■■□□□ 1.61
SIL1-202ENST00000394817 ADGRF5Q8IZF2 1346 aa25.11■■□□□ 1.61
SIL1-202ENST00000394817 NUDCQ9Y266 331 aa25.1■■□□□ 1.61
SIL1-202ENST00000394817 PREX1Q8TCU6 1659 aa25.1■■□□□ 1.61
SIL1-202ENST00000394817 IRX6P78412 446 aaPredicted RBP25.1■■□□□ 1.61
SIL1-202ENST00000394817 INSRP06213 1382 aa25.09■■□□□ 1.61
SIL1-202ENST00000394817 CHGAP10645 457 aaKnown RBP25.08■■□□□ 1.61
SIL1-202ENST00000394817 CLTCQ00610 1675 aaKnown RBP25.08■■□□□ 1.61
SIL1-202ENST00000394817 CFAP70Q5T0N1 1121 aa25.07■■□□□ 1.6
SIL1-202ENST00000394817 CC2D1BQ5T0F9 858 aaKnown RBP25.06■■□□□ 1.6
SIL1-202ENST00000394817 PIK3C2GO75747 1445 aa25.06■■□□□ 1.6
SIL1-202ENST00000394817 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
SIL1-202ENST00000394817 ERVK-7P63135 1459 aa25.04■■□□□ 1.6
SIL1-202ENST00000394817 ASXL1Q8IXJ9 1541 aa25.04■■□□□ 1.6
SIL1-202ENST00000394817 SBNO2Q9Y2G9 1366 aa25.03■■□□□ 1.6
SIL1-202ENST00000394817 MLECQ14165 292 aa25.03■■□□□ 1.6
SIL1-202ENST00000394817 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
SIL1-202ENST00000394817 PPP4R2Q9NY27 417 aa25.01■■□□□ 1.59
SIL1-202ENST00000394817 RNF123Q5XPI4 1314 aa25.01■■□□□ 1.59
SIL1-202ENST00000394817 ADGRB1O14514 1584 aa25■■□□□ 1.59
SIL1-202ENST00000394817 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
SIL1-202ENST00000394817 RPGRIP1LQ68CZ1 1315 aa25■■□□□ 1.59
SIL1-202ENST00000394817 NPC1L1Q9UHC9 1359 aa25■■□□□ 1.59
SIL1-202ENST00000394817 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
SIL1-202ENST00000394817 KNSTRNQ9Y448 316 aa25■■□□□ 1.59
SIL1-202ENST00000394817 QRICH2Q9H0J4 1663 aa24.98■■□□□ 1.59
SIL1-202ENST00000394817 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
SIL1-202ENST00000394817 AMER1Q5JTC6 1135 aaPredicted RBP24.98■■□□□ 1.59
SIL1-202ENST00000394817 IDI1Q13907 227 aa24.97■■□□□ 1.59
SIL1-202ENST00000394817 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
SIL1-202ENST00000394817 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
SIL1-202ENST00000394817 C14orf93Q9H972 538 aaKnown RBP24.94■■□□□ 1.58
SIL1-202ENST00000394817 TMEM131LA2VDJ0 1609 aa24.93■■□□□ 1.58
SIL1-202ENST00000394817 SLC52A1Q9NWF4 448 aa24.92■■□□□ 1.58
SIL1-202ENST00000394817 SENP3-EIF4A1A0A087X0R7 540 aa24.9■■□□□ 1.58
SIL1-202ENST00000394817 PDE3BQ13370 1112 aa24.9■■□□□ 1.58
SIL1-202ENST00000394817 CENPJQ9HC77 1338 aaPredicted RBP24.9■■□□□ 1.58
SIL1-202ENST00000394817 ARHGEF28Q8N1W1 1705 aaKnown RBP24.9■■□□□ 1.58
SIL1-202ENST00000394817 NUTM2DQ5VT03 806 aaPredicted RBP24.9■■□□□ 1.58
SIL1-202ENST00000394817 PPP2R1AP30153 589 aa24.89■■□□□ 1.58
SIL1-202ENST00000394817 SPATA31D1Q6ZQQ2 1576 aa24.89■■□□□ 1.57
SIL1-202ENST00000394817 ZFYVE9O95405 1425 aa24.85■■□□□ 1.57
SIL1-202ENST00000394817 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
SIL1-202ENST00000394817 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
SIL1-202ENST00000394817 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
SIL1-202ENST00000394817 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
SIL1-202ENST00000394817 USP32Q8NFA0 1604 aa24.81■■□□□ 1.56
SIL1-202ENST00000394817 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
SIL1-202ENST00000394817 B4GALNT3Q6L9W6 998 aa24.79■■□□□ 1.56
SIL1-202ENST00000394817 CARD14Q9BXL6 1004 aa24.78■■□□□ 1.56
SIL1-202ENST00000394817 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
SIL1-202ENST00000394817 ADAMTS8Q9UP79 889 aa24.78■■□□□ 1.56
SIL1-202ENST00000394817 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
SIL1-202ENST00000394817 SALL2Q9Y467 1007 aaPredicted RBP24.77■■□□□ 1.56
SIL1-202ENST00000394817 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SIL1-202ENST00000394817 RBM19Q9Y4C8 960 aaKnown RBP24.76■■□□□ 1.55
SIL1-202ENST00000394817 A2ML1A8K2U0 1454 aa24.75■■□□□ 1.55
SIL1-202ENST00000394817 TULP4Q9NRJ4 1543 aa24.75■■□□□ 1.55
SIL1-202ENST00000394817 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
SIL1-202ENST00000394817 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
SIL1-202ENST00000394817 RRP1P56182 461 aaKnown RBP24.73■■□□□ 1.55
SIL1-202ENST00000394817 PUS7Q96PZ0 661 aaKnown RBP24.72■■□□□ 1.55
SIL1-202ENST00000394817 CDCA7LQ96GN5 454 aa24.71■■□□□ 1.55
SIL1-202ENST00000394817 NSD3Q9BZ95 1437 aa24.71■■□□□ 1.55
SIL1-202ENST00000394817 FER1L4A9Z1Z3 1794 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms