RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 AAMPQ13685 434 aa10.93□□□□□ -0.66
CHD2-201ENST00000394196 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
CHD2-201ENST00000394196 FAM184BQ9ULE4 1060 aa10.93□□□□□ -0.66
CHD2-201ENST00000394196 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
CHD2-201ENST00000394196 H3BQV1 296 aa10.92□□□□□ -0.66
CHD2-201ENST00000394196 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
CHD2-201ENST00000394196 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
CHD2-201ENST00000394196 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
CHD2-201ENST00000394196 KIF3CO14782 793 aa10.92□□□□□ -0.66
CHD2-201ENST00000394196 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
CHD2-201ENST00000394196 PDE4AP27815 886 aa10.91□□□□□ -0.66
CHD2-201ENST00000394196 LRRFIP1Q32MZ4 808 aaKnown RBP10.91□□□□□ -0.66
CHD2-201ENST00000394196 NASPP49321 788 aaPredicted RBP10.91□□□□□ -0.66
CHD2-201ENST00000394196 REC8O95072 547 aa10.9□□□□□ -0.66
CHD2-201ENST00000394196 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 EZRP15311 586 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 PRPF40AO75400 957 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 AKAP17AQ02040 695 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
CHD2-201ENST00000394196 NGEFQ8N5V2 710 aa10.9□□□□□ -0.66
CHD2-201ENST00000394196 ZMAT2Q96NC0 199 aaKnown RBP10.9□□□□□ -0.66
CHD2-201ENST00000394196 CEP164Q9UPV0 1460 aa10.9□□□□□ -0.67
CHD2-201ENST00000394196 SASS6Q6UVJ0 657 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 ITPRIPQ8IWB1 547 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 FAM184AQ8NB25 1140 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 SH2D4BQ5SQS7 431 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
CHD2-201ENST00000394196 IFT57Q9NWB7 429 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 SLC26A8Q96RN1 970 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 IQCEQ6IPM2 695 aa10.89□□□□□ -0.67
CHD2-201ENST00000394196 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
CHD2-201ENST00000394196 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
CHD2-201ENST00000394196 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
CHD2-201ENST00000394196 FEZ1Q99689 392 aa10.88□□□□□ -0.67
CHD2-201ENST00000394196 FHAD1B1AJZ9 1412 aa10.88□□□□□ -0.67
CHD2-201ENST00000394196 IVLP07476 585 aa10.88□□□□□ -0.67
CHD2-201ENST00000394196 CT47B1P0C2W7 299 aaPredicted RBP10.88□□□□□ -0.67
CHD2-201ENST00000394196 MBD3O95983 291 aa10.87□□□□□ -0.67
CHD2-201ENST00000394196 R3HCC1Q9Y3T6 440 aaKnown RBP10.87□□□□□ -0.67
CHD2-201ENST00000394196 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
CHD2-201ENST00000394196 KIF2AO00139 706 aaPredicted RBP10.87□□□□□ -0.67
CHD2-201ENST00000394196 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
CHD2-201ENST00000394196 KIF3BO15066 747 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 NPHP1O15259 732 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 CGNL1Q0VF96 1302 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD2-201ENST00000394196 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
CHD2-201ENST00000394196 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 TXLNBQ8N3L3 684 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 RRP7BPQ9NSQ0 103 aa10.86□□□□□ -0.67
CHD2-201ENST00000394196 ERLIN2O94905 339 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 A0A1B0GUA9 196 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 CENPJQ9HC77 1338 aaPredicted RBP10.85□□□□□ -0.67
CHD2-201ENST00000394196 MCM3P25205 808 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 DNAAF4Q8WXU2 420 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
CHD2-201ENST00000394196 DAAM2Q86T65 1068 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
CHD2-201ENST00000394196 KIF20AO95235 890 aa10.84□□□□□ -0.67
CHD2-201ENST00000394196 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
CHD2-201ENST00000394196 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
CHD2-201ENST00000394196 MORC1Q86VD1 984 aa10.84□□□□□ -0.67
CHD2-201ENST00000394196 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
CHD2-201ENST00000394196 DNAJC21Q5F1R6 531 aaKnown RBP10.84□□□□□ -0.67
CHD2-201ENST00000394196 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
CHD2-201ENST00000394196 GBP3Q9H0R5 595 aa10.84□□□□□ -0.67
CHD2-201ENST00000394196 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
CHD2-201ENST00000394196 MNAT1P51948 309 aa10.83□□□□□ -0.68
CHD2-201ENST00000394196 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
CHD2-201ENST00000394196 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
CHD2-201ENST00000394196 UQCRHLA0A096LP55 91 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 UQCRHP07919 91 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 SMC4Q9NTJ3 1288 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 NLRP13Q86W25 1043 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 SMARCE1Q969G3 411 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 FMNL3Q8IVF7 1028 aa10.82□□□□□ -0.68
CHD2-201ENST00000394196 IPO4Q8TEX9 1081 aaKnown RBP10.82□□□□□ -0.68
CHD2-201ENST00000394196 NFKBIBQ15653 356 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 POGKQ9P215 609 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 ROCK1Q13464 1354 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 MCM2P49736 904 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 TRIM29Q14134 588 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 ZKSCAN1P17029 563 aaPredicted RBP10.81□□□□□ -0.68
CHD2-201ENST00000394196 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
CHD2-201ENST00000394196 A0A0G2JS52 829 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
CHD2-201ENST00000394196 PPFIBP2Q8ND30 876 aa10.8□□□□□ -0.68
CHD2-201ENST00000394196 OLFM4Q6UX06 510 aa10.8□□□□□ -0.68
CHD2-201ENST00000394196 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
CHD2-201ENST00000394196 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms