RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
TRAPPC9-201ENST00000389328 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-201ENST00000389328 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
TRAPPC9-201ENST00000389328 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
TRAPPC9-201ENST00000389328 DRC7Q8IY82 874 aa16.3■□□□□ 0.2
TRAPPC9-201ENST00000389328 MTHFSP49914 203 aa16.3■□□□□ 0.2
TRAPPC9-201ENST00000389328 ABCC5O15440 1437 aa16.3■□□□□ 0.2
TRAPPC9-201ENST00000389328 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
TRAPPC9-201ENST00000389328 NESP48681 1621 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 SLC4A10Q6U841 1118 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 TRIM6-TRIM34B2RNG4 842 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 RIPK4P57078 832 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
TRAPPC9-201ENST00000389328 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
TRAPPC9-201ENST00000389328 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
TRAPPC9-201ENST00000389328 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
TRAPPC9-201ENST00000389328 ERBINQ96RT1 1412 aa16.27■□□□□ 0.2
TRAPPC9-201ENST00000389328 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
TRAPPC9-201ENST00000389328 TERF2IPQ9NYB0 399 aa16.27■□□□□ 0.2
TRAPPC9-201ENST00000389328 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
TRAPPC9-201ENST00000389328 AAMPQ13685 434 aa16.27■□□□□ 0.19
TRAPPC9-201ENST00000389328 PKNOX2Q96KN3 472 aa16.27■□□□□ 0.19
TRAPPC9-201ENST00000389328 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC9-201ENST00000389328 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
TRAPPC9-201ENST00000389328 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
TRAPPC9-201ENST00000389328 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
TRAPPC9-201ENST00000389328 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
TRAPPC9-201ENST00000389328 IGHDP01880 384 aa16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 EXOSC9Q06265 439 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 ESPNB1AK53 854 aa16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 HAP1P54257 671 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
TRAPPC9-201ENST00000389328 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
TRAPPC9-201ENST00000389328 PTPRGP23470 1445 aa16.24■□□□□ 0.19
TRAPPC9-201ENST00000389328 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 FGD1P98174 961 aa16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 KIAA1211Q6ZU35 1233 aa16.23■□□□□ 0.19
TRAPPC9-201ENST00000389328 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 GGNBP2Q9H3C7 697 aa16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-201ENST00000389328 HMMRO75330 724 aa16.21■□□□□ 0.19
TRAPPC9-201ENST00000389328 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
TRAPPC9-201ENST00000389328 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.18
TRAPPC9-201ENST00000389328 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.18
TRAPPC9-201ENST00000389328 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
TRAPPC9-201ENST00000389328 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-201ENST00000389328 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-201ENST00000389328 NUCB2P80303 420 aa16.19■□□□□ 0.18
TRAPPC9-201ENST00000389328 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-201ENST00000389328 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-201ENST00000389328 UBE2Q2Q8WVN8 375 aa16.17■□□□□ 0.18
TRAPPC9-201ENST00000389328 PHF14O94880 888 aa16.17■□□□□ 0.18
TRAPPC9-201ENST00000389328 RARSP54136 660 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-201ENST00000389328 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-201ENST00000389328 HMOX1P09601 288 aa16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 PANK2Q9BZ23 570 aa16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 PRPF40AO75400 957 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 REC8O95072 547 aa16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
TRAPPC9-201ENST00000389328 CDC45O75419 566 aa16.15■□□□□ 0.18
TRAPPC9-201ENST00000389328 TPM2P07951 284 aa16.15■□□□□ 0.18
TRAPPC9-201ENST00000389328 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
TRAPPC9-201ENST00000389328 CCDC173Q0VFZ6 552 aa16.15■□□□□ 0.18
TRAPPC9-201ENST00000389328 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
TRAPPC9-201ENST00000389328 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 SEC24BO95487 1268 aa16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 NKTRP30414 1462 aaKnown RBP16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 XRCC6P12956 609 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
TRAPPC9-201ENST00000389328 MPNDQ8N594 471 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 MLECQ14165 292 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 CSPP1Q1MSJ5 1256 aa16.13■□□□□ 0.17
TRAPPC9-201ENST00000389328 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms