RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ADGRF5Q8IZF2 1346 aa26.89■■□□□ 1.89
HDAC1-201ENST00000373548 NRXN1Q9ULB1 1477 aa26.89■■□□□ 1.89
HDAC1-201ENST00000373548 ARHGAP31Q2M1Z3 1444 aa26.89■■□□□ 1.89
HDAC1-201ENST00000373548 PIK3C2BO00750 1634 aa26.88■■□□□ 1.89
HDAC1-201ENST00000373548 SYNMO15061 1565 aa26.87■■□□□ 1.89
HDAC1-201ENST00000373548 PPLO60437 1756 aa26.87■■□□□ 1.89
HDAC1-201ENST00000373548 TMF1P82094 1093 aa26.86■■□□□ 1.89
HDAC1-201ENST00000373548 CHGAP10645 457 aaKnown RBP26.84■■□□□ 1.89
HDAC1-201ENST00000373548 HNRNPUQ00839 825 aaKnown RBP eCLIP26.84■■□□□ 1.898e-6■□□□□ 9.8
HDAC1-201ENST00000373548 CNGB1Q14028 1251 aaPredicted RBP26.84■■□□□ 1.89
HDAC1-201ENST00000373548 REREQ9P2R6 1566 aa26.84■■□□□ 1.89
HDAC1-201ENST00000373548 CFAP70Q5T0N1 1121 aa26.83■■□□□ 1.89
HDAC1-201ENST00000373548 FAM9BQ8IZU0 186 aa26.8■■□□□ 1.88
HDAC1-201ENST00000373548 EIF3AQ14152 1382 aaKnown RBP26.78■■□□□ 1.88
HDAC1-201ENST00000373548 KTN1Q86UP2 1357 aaKnown RBP26.78■■□□□ 1.88
HDAC1-201ENST00000373548 AGLP35573 1532 aa26.78■■□□□ 1.88
HDAC1-201ENST00000373548 PREX1Q8TCU6 1659 aa26.77■■□□□ 1.88
HDAC1-201ENST00000373548 RPGRIP1LQ68CZ1 1315 aa26.77■■□□□ 1.88
HDAC1-201ENST00000373548 PER1O15534 1290 aaPredicted RBP26.76■■□□□ 1.87
HDAC1-201ENST00000373548 PIK3C2GO75747 1445 aa26.76■■□□□ 1.87
HDAC1-201ENST00000373548 SETBP1Q9Y6X0 1596 aa26.75■■□□□ 1.87
HDAC1-201ENST00000373548 RALBP1Q15311 655 aa26.74■■□□□ 1.87
HDAC1-201ENST00000373548 NEXMIFQ5QGS0 1516 aa26.71■■□□□ 1.87
HDAC1-201ENST00000373548 PANK3Q9H999 370 aa26.71■■□□□ 1.87
HDAC1-201ENST00000373548 IDI1Q13907 227 aa26.7■■□□□ 1.86
HDAC1-201ENST00000373548 MYO3AQ8NEV4 1616 aa26.7■■□□□ 1.86
HDAC1-201ENST00000373548 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
HDAC1-201ENST00000373548 MYBBP1AQ9BQG0 1328 aaKnown RBP26.7■■□□□ 1.86
HDAC1-201ENST00000373548 PARD3Q8TEW0 1356 aa26.69■■□□□ 1.86
HDAC1-201ENST00000373548 SLC52A1Q9NWF4 448 aa26.69■■□□□ 1.86
HDAC1-201ENST00000373548 SUPT16HQ9Y5B9 1047 aaKnown RBP26.69■■□□□ 1.86
HDAC1-201ENST00000373548 MYO5BQ9ULV0 1848 aa26.68■■□□□ 1.86
HDAC1-201ENST00000373548 C14orf93Q9H972 538 aaKnown RBP26.68■■□□□ 1.86
HDAC1-201ENST00000373548 CDCA8Q53HL2 280 aa26.68■■□□□ 1.86
HDAC1-201ENST00000373548 ADGRB1O14514 1584 aa26.68■■□□□ 1.86
HDAC1-201ENST00000373548 MYOM1P52179 1685 aa26.66■■□□□ 1.86
HDAC1-201ENST00000373548 KDM5AP29375 1690 aaKnown RBP26.66■■□□□ 1.86
HDAC1-201ENST00000373548 BRD4O60885 1362 aaPredicted RBP26.66■■□□□ 1.86
HDAC1-201ENST00000373548 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
HDAC1-201ENST00000373548 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
HDAC1-201ENST00000373548 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
HDAC1-201ENST00000373548 TMC1Q8TDI8 760 aa26.65■■□□□ 1.86
HDAC1-201ENST00000373548 ERVK-7P63135 1459 aa26.64■■□□□ 1.86
HDAC1-201ENST00000373548 PNISRQ8TF01 805 aaKnown RBP26.63■■□□□ 1.85
HDAC1-201ENST00000373548 FBXO31Q5XUX0 539 aaPredicted RBP26.62■■□□□ 1.85
HDAC1-201ENST00000373548 ZBED9Q6R2W3 1325 aa26.62■■□□□ 1.85
HDAC1-201ENST00000373548 VGFO15240 615 aaPredicted RBP26.62■■□□□ 1.85
HDAC1-201ENST00000373548 SBNO2Q9Y2G9 1366 aa26.61■■□□□ 1.85
HDAC1-201ENST00000373548 SLC24A1O60721 1099 aa26.6■■□□□ 1.85
HDAC1-201ENST00000373548 NUTM2DQ5VT03 806 aaPredicted RBP26.6■■□□□ 1.85
HDAC1-201ENST00000373548 ZFYVE9O95405 1425 aa26.59■■□□□ 1.85
HDAC1-201ENST00000373548 CC2D1BQ5T0F9 858 aaKnown RBP26.58■■□□□ 1.85
HDAC1-201ENST00000373548 NLRP13Q86W25 1043 aa26.57■■□□□ 1.84
HDAC1-201ENST00000373548 TMEM132EQ6IEE7 984 aa26.57■■□□□ 1.84
HDAC1-201ENST00000373548 QRICH2Q9H0J4 1663 aa26.57■■□□□ 1.84
HDAC1-201ENST00000373548 CENPJQ9HC77 1338 aaPredicted RBP26.56■■□□□ 1.84
HDAC1-201ENST00000373548 LRPPRCP42704 1394 aaKnown RBP26.56■■□□□ 1.84
HDAC1-201ENST00000373548 TRAK1Q9UPV9 953 aa26.56■■□□□ 1.84
HDAC1-201ENST00000373548 SPATA31D1Q6ZQQ2 1576 aa26.54■■□□□ 1.84
HDAC1-201ENST00000373548 MLECQ14165 292 aa26.54■■□□□ 1.84
HDAC1-201ENST00000373548 ARHGEF28Q8N1W1 1705 aaKnown RBP26.52■■□□□ 1.84
HDAC1-201ENST00000373548 KNSTRNQ9Y448 316 aa26.51■■□□□ 1.84
HDAC1-201ENST00000373548 FKBP8Q14318 412 aa26.51■■□□□ 1.83
HDAC1-201ENST00000373548 ASXL1Q8IXJ9 1541 aa26.5■■□□□ 1.83
HDAC1-201ENST00000373548 AMER1Q5JTC6 1135 aaPredicted RBP26.49■■□□□ 1.83
HDAC1-201ENST00000373548 NEFLP07196 543 aa26.47■■□□□ 1.83
HDAC1-201ENST00000373548 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
HDAC1-201ENST00000373548 NPC1L1Q9UHC9 1359 aa26.44■■□□□ 1.82
HDAC1-201ENST00000373548 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
HDAC1-201ENST00000373548 STAG3Q9UJ98 1225 aa26.42■■□□□ 1.82
HDAC1-201ENST00000373548 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
HDAC1-201ENST00000373548 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.81
HDAC1-201ENST00000373548 ESF1Q9H501 851 aaKnown RBP26.38■■□□□ 1.81
HDAC1-201ENST00000373548 ALKQ9UM73 1620 aa26.38■■□□□ 1.81
HDAC1-201ENST00000373548 CARD14Q9BXL6 1004 aa26.38■■□□□ 1.81
HDAC1-201ENST00000373548 TULP4Q9NRJ4 1543 aa26.37■■□□□ 1.81
HDAC1-201ENST00000373548 PPP2R1AP30153 589 aa26.37■■□□□ 1.81
HDAC1-201ENST00000373548 SMG6Q86US8 1419 aaKnown RBP26.35■■□□□ 1.81
HDAC1-201ENST00000373548 BCANQ96GW7 911 aa26.35■■□□□ 1.81
HDAC1-201ENST00000373548 SENP3-EIF4A1A0A087X0R7 540 aa26.35■■□□□ 1.81
HDAC1-201ENST00000373548 RIMS2Q9UQ26 1411 aa26.34■■□□□ 1.81
HDAC1-201ENST00000373548 PTPRMP28827 1452 aa26.34■■□□□ 1.81
HDAC1-201ENST00000373548 INSRP06213 1382 aa26.33■■□□□ 1.81
HDAC1-201ENST00000373548 YTHDC2Q9H6S0 1430 aaKnown RBP26.33■■□□□ 1.81
HDAC1-201ENST00000373548 STK26Q9P289 416 aa26.33■■□□□ 1.81
HDAC1-201ENST00000373548 EVC2Q86UK5 1308 aa26.32■■□□□ 1.8
HDAC1-201ENST00000373548 PUS7Q96PZ0 661 aaKnown RBP26.32■■□□□ 1.8
HDAC1-201ENST00000373548 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
HDAC1-201ENST00000373548 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
HDAC1-201ENST00000373548 SETD1AO15047 1707 aaKnown RBP26.29■■□□□ 1.8
HDAC1-201ENST00000373548 NUDCQ9Y266 331 aa26.29■■□□□ 1.8
HDAC1-201ENST00000373548 SAFB2Q14151 953 aaKnown RBP eCLIP26.27■■□□□ 1.8
HDAC1-201ENST00000373548 NSD3Q9BZ95 1437 aa26.27■■□□□ 1.8
HDAC1-201ENST00000373548 TNRQ92752 1358 aa26.27■■□□□ 1.8
HDAC1-201ENST00000373548 USP32Q8NFA0 1604 aa26.25■■□□□ 1.79
HDAC1-201ENST00000373548 PRAM1Q96QH2 718 aa26.24■■□□□ 1.79
HDAC1-201ENST00000373548 NRXN3Q9Y4C0 1643 aa26.24■■□□□ 1.79
HDAC1-201ENST00000373548 IRX6P78412 446 aaPredicted RBP26.23■■□□□ 1.79
HDAC1-201ENST00000373548 CABP2Q9NPB3 220 aa26.22■■□□□ 1.79
HDAC1-201ENST00000373548 UBR1Q8IWV7 1749 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms