RNA–Protein interactions for RNA: ENST00000373184.5

PTPRT-202, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-202ENST00000373184 DDX58O95786 925 aaKnown RBP7.37□□□□□ -1.23
PTPRT-202ENST00000373184 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
PTPRT-202ENST00000373184 HMGXB3Q12766 1538 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 HMGB2P26583 209 aaKnown RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 SPRYD3Q8NCJ5 442 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 FRAT2O75474 233 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 TCEAL9Q9UHQ7 104 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 CUL7Q14999 1698 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 SYNJ2O15056 1496 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 ARHGAP5Q13017 1502 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 JPH4Q96JJ6 628 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 DHX8Q14562 1220 aaKnown RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 DHX57Q6P158 1386 aaKnown RBP7.35□□□□□ -1.23
PTPRT-202ENST00000373184 ERC2O15083 957 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 HFM1A2PYH4 1435 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 FOXD1Q16676 465 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 CCDC7Q96M83 1385 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 MARCH6O60337 910 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 FAM184AQ8NB25 1140 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TEFQ10587 303 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
PTPRT-202ENST00000373184 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 BECN2A8MW95 431 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TRIM29Q14134 588 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 PKNOX2Q96KN3 472 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
PTPRT-202ENST00000373184 SLC4A10Q6U841 1118 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 DAPK1P53355 1430 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 GNAI1P63096 354 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 LRRC9Q6ZRR7 1453 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 RRP1P56182 461 aaKnown RBP7.34□□□□□ -1.24
PTPRT-202ENST00000373184 C9orf78Q9NZ63 289 aaPredicted RBP7.34□□□□□ -1.24
PTPRT-202ENST00000373184 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 HNRNPMP52272 730 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CPLX1O14810 134 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 TRDNQ13061 729 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 ST20-MTHFSA0A0A6YYL1 179 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CDR1P51861 262 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 ARID3AQ99856 593 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NAT10Q9H0A0 1025 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 PANK3Q9H999 370 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NUCB2P80303 420 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 PRKRIP1Q9H875 184 aaPredicted RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 IFIT2P09913 472 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 NCOA2Q15596 1464 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 PDE4CQ08493 712 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 ERICH2A1L162 156 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 SAFBQ15424 915 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 HIP1O00291 1037 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 FBXO3Q9UK99 471 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 MTERF4Q7Z6M4 381 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 PDIA4P13667 645 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 CCP110O43303 1012 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 RUNDC1Q96C34 613 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 GZF1Q9H116 711 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 OSCARQ8IYS5 282 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 XBP1P17861 261 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 CTDP1Q9Y5B0 961 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 MYO6Q9UM54 1294 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 MCM2P49736 904 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DDX49Q9Y6V7 483 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 PDCP20941 246 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DHX16O60231 1041 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 CLUAP1Q96AJ1 413 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC43Q96MW1 224 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms