RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 PZPP20742 1482 aa12.98□□□□□ -0.33
KDM4A-201ENST00000372396 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
KDM4A-201ENST00000372396 FGD1P98174 961 aa12.98□□□□□ -0.33
KDM4A-201ENST00000372396 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
KDM4A-201ENST00000372396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
KDM4A-201ENST00000372396 ADCY10Q96PN6 1610 aa12.97□□□□□ -0.33
KDM4A-201ENST00000372396 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
KDM4A-201ENST00000372396 PDE3BQ13370 1112 aa12.96□□□□□ -0.34
KDM4A-201ENST00000372396 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
KDM4A-201ENST00000372396 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
KDM4A-201ENST00000372396 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
KDM4A-201ENST00000372396 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
KDM4A-201ENST00000372396 A2MP01023 1474 aa12.94□□□□□ -0.34
KDM4A-201ENST00000372396 MBD5Q9P267 1494 aa12.94□□□□□ -0.34
KDM4A-201ENST00000372396 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
KDM4A-201ENST00000372396 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
KDM4A-201ENST00000372396 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
KDM4A-201ENST00000372396 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
KDM4A-201ENST00000372396 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
KDM4A-201ENST00000372396 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
KDM4A-201ENST00000372396 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
KDM4A-201ENST00000372396 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
KDM4A-201ENST00000372396 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
KDM4A-201ENST00000372396 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
KDM4A-201ENST00000372396 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
KDM4A-201ENST00000372396 SAMD9LQ8IVG5 1584 aa12.9□□□□□ -0.34
KDM4A-201ENST00000372396 ZCCHC11Q5TAX3 1644 aaKnown RBP12.9□□□□□ -0.34
KDM4A-201ENST00000372396 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
KDM4A-201ENST00000372396 AAMPQ13685 434 aa12.9□□□□□ -0.35
KDM4A-201ENST00000372396 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
KDM4A-201ENST00000372396 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
KDM4A-201ENST00000372396 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
KDM4A-201ENST00000372396 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
KDM4A-201ENST00000372396 TMEM132EQ6IEE7 984 aa12.88□□□□□ -0.35
KDM4A-201ENST00000372396 CLASP1Q7Z460 1538 aa12.87□□□□□ -0.35
KDM4A-201ENST00000372396 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
KDM4A-201ENST00000372396 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
KDM4A-201ENST00000372396 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
KDM4A-201ENST00000372396 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
KDM4A-201ENST00000372396 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
KDM4A-201ENST00000372396 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
KDM4A-201ENST00000372396 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
KDM4A-201ENST00000372396 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
KDM4A-201ENST00000372396 NEO1Q92859 1461 aa12.86□□□□□ -0.35
KDM4A-201ENST00000372396 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 MS4A1P11836 297 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 ARXQ96QS3 562 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
KDM4A-201ENST00000372396 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
KDM4A-201ENST00000372396 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 ABCC1P33527 1531 aa12.85□□□□□ -0.35
KDM4A-201ENST00000372396 KDM6BO15054 1643 aa12.84□□□□□ -0.35
KDM4A-201ENST00000372396 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
KDM4A-201ENST00000372396 L1TD1Q5T7N2 865 aaKnown RBP12.84□□□□□ -0.35
KDM4A-201ENST00000372396 SHROOM2Q13796 1616 aa12.83□□□□□ -0.36
KDM4A-201ENST00000372396 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
KDM4A-201ENST00000372396 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
KDM4A-201ENST00000372396 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
KDM4A-201ENST00000372396 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
KDM4A-201ENST00000372396 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
KDM4A-201ENST00000372396 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
KDM4A-201ENST00000372396 NOS1P29475 1434 aa12.8□□□□□ -0.36
KDM4A-201ENST00000372396 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
KDM4A-201ENST00000372396 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
KDM4A-201ENST00000372396 IDI1Q13907 227 aa12.8□□□□□ -0.36
KDM4A-201ENST00000372396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.365e-6■■■□□ 14.7
KDM4A-201ENST00000372396 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
KDM4A-201ENST00000372396 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
KDM4A-201ENST00000372396 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
KDM4A-201ENST00000372396 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
KDM4A-201ENST00000372396 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
KDM4A-201ENST00000372396 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
KDM4A-201ENST00000372396 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
KDM4A-201ENST00000372396 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
KDM4A-201ENST00000372396 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
KDM4A-201ENST00000372396 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
KDM4A-201ENST00000372396 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
KDM4A-201ENST00000372396 COG3Q96JB2 828 aa12.78□□□□□ -0.36
KDM4A-201ENST00000372396 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.36
KDM4A-201ENST00000372396 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
KDM4A-201ENST00000372396 CROCC2H7BZ55 1655 aa12.77□□□□□ -0.37
KDM4A-201ENST00000372396 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.37
KDM4A-201ENST00000372396 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
KDM4A-201ENST00000372396 TXNDC2Q86VQ3 553 aa12.76□□□□□ -0.37
KDM4A-201ENST00000372396 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
KDM4A-201ENST00000372396 E9PSI1 815 aa12.75□□□□□ -0.37
KDM4A-201ENST00000372396 SOX12O15370 315 aa12.75□□□□□ -0.37
KDM4A-201ENST00000372396 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
KDM4A-201ENST00000372396 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
KDM4A-201ENST00000372396 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
KDM4A-201ENST00000372396 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 ATP10AO60312 1499 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 APAF1O14727 1248 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
KDM4A-201ENST00000372396 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms