RNA–Protein interactions for RNA: ENST00000366661.8

TTC13-201, Transcript of tetratricopeptide repeat domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC13, Length 3,253 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-201ENST00000366661 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
TTC13-201ENST00000366661 RAPGEF3O95398 923 aa20.1■□□□□ 0.81
TTC13-201ENST00000366661 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
TTC13-201ENST00000366661 MLH3Q9UHC1 1453 aa20.09■□□□□ 0.81
TTC13-201ENST00000366661 ZMYM4Q5VZL5 1548 aa20.09■□□□□ 0.81
TTC13-201ENST00000366661 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.8
TTC13-201ENST00000366661 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.8
TTC13-201ENST00000366661 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
TTC13-201ENST00000366661 HECW2Q9P2P5 1572 aa20.07■□□□□ 0.8
TTC13-201ENST00000366661 RCAN3Q9UKA8 241 aa20.07■□□□□ 0.8
TTC13-201ENST00000366661 GGT6Q6P531 493 aa20.06■□□□□ 0.8
TTC13-201ENST00000366661 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
TTC13-201ENST00000366661 MAGI2Q86UL8 1455 aa20.04■□□□□ 0.8
TTC13-201ENST00000366661 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
TTC13-201ENST00000366661 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
TTC13-201ENST00000366661 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
TTC13-201ENST00000366661 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
TTC13-201ENST00000366661 CRBNQ96SW2 442 aa20.02■□□□□ 0.8
TTC13-201ENST00000366661 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
TTC13-201ENST00000366661 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
TTC13-201ENST00000366661 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
TTC13-201ENST00000366661 ERBINQ96RT1 1412 aa19.99■□□□□ 0.79
TTC13-201ENST00000366661 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
TTC13-201ENST00000366661 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
TTC13-201ENST00000366661 EIF2AK4Q9P2K8 1649 aaKnown RBP19.98■□□□□ 0.79
TTC13-201ENST00000366661 CCDC144AA2RUR9 1427 aa19.97■□□□□ 0.79
TTC13-201ENST00000366661 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
TTC13-201ENST00000366661 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
TTC13-201ENST00000366661 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
TTC13-201ENST00000366661 CCDC7Q96M83 1385 aa19.96■□□□□ 0.79
TTC13-201ENST00000366661 BCORL1Q5H9F3 1711 aa19.95■□□□□ 0.78
TTC13-201ENST00000366661 ABCA6Q8N139 1617 aa19.95■□□□□ 0.78
TTC13-201ENST00000366661 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
TTC13-201ENST00000366661 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
TTC13-201ENST00000366661 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
TTC13-201ENST00000366661 C20orf194Q5TEA3 1177 aa19.93■□□□□ 0.78
TTC13-201ENST00000366661 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
TTC13-201ENST00000366661 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
TTC13-201ENST00000366661 UNC13BO14795 1591 aa19.91■□□□□ 0.78
TTC13-201ENST00000366661 MS4A1P11836 297 aa19.91■□□□□ 0.78
TTC13-201ENST00000366661 A2MP01023 1474 aa19.91■□□□□ 0.78
TTC13-201ENST00000366661 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
TTC13-201ENST00000366661 KDM5DQ9BY66 1539 aa19.9■□□□□ 0.78
TTC13-201ENST00000366661 USP47Q96K76 1375 aa19.9■□□□□ 0.78
TTC13-201ENST00000366661 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
TTC13-201ENST00000366661 DEPDC5O75140 1603 aa19.89■□□□□ 0.77
TTC13-201ENST00000366661 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
TTC13-201ENST00000366661 NUTM2DQ5VT03 806 aaPredicted RBP19.87■□□□□ 0.77
TTC13-201ENST00000366661 ATP10AO60312 1499 aa19.87■□□□□ 0.77
TTC13-201ENST00000366661 ROCK2O75116 1388 aaKnown RBP19.87■□□□□ 0.77
TTC13-201ENST00000366661 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
TTC13-201ENST00000366661 MLECQ14165 292 aa19.86■□□□□ 0.77
TTC13-201ENST00000366661 RNF17Q9BXT8 1623 aaKnown RBP19.86■□□□□ 0.77
TTC13-201ENST00000366661 AGLP35573 1532 aa19.85■□□□□ 0.77
TTC13-201ENST00000366661 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
TTC13-201ENST00000366661 PNISRQ8TF01 805 aaKnown RBP19.84■□□□□ 0.77
TTC13-201ENST00000366661 KANK1Q14678 1352 aa19.83■□□□□ 0.77
TTC13-201ENST00000366661 GOLGA6L3A6NEY3 463 aa19.83■□□□□ 0.77
TTC13-201ENST00000366661 RRP9O43818 475 aaKnown RBP19.83■□□□□ 0.77
TTC13-201ENST00000366661 IQGAP3Q86VI3 1631 aa19.82■□□□□ 0.76
TTC13-201ENST00000366661 RNF123Q5XPI4 1314 aa19.82■□□□□ 0.76
TTC13-201ENST00000366661 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
TTC13-201ENST00000366661 L1TD1Q5T7N2 865 aaKnown RBP19.82■□□□□ 0.76
TTC13-201ENST00000366661 PRDM15P57071 1507 aaPredicted RBP19.82■□□□□ 0.76
TTC13-201ENST00000366661 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
TTC13-201ENST00000366661 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
TTC13-201ENST00000366661 VWDEQ8N2E2 1590 aa19.8■□□□□ 0.76
TTC13-201ENST00000366661 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
TTC13-201ENST00000366661 MROH1Q8NDA8 1641 aa19.78■□□□□ 0.76
TTC13-201ENST00000366661 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
TTC13-201ENST00000366661 TRIM44Q96DX7 344 aaPredicted RBP19.77■□□□□ 0.76
TTC13-201ENST00000366661 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
TTC13-201ENST00000366661 LMTK2Q8IWU2 1503 aa19.74■□□□□ 0.75
TTC13-201ENST00000366661 CC2D1BQ5T0F9 858 aaKnown RBP19.74■□□□□ 0.75
TTC13-201ENST00000366661 PRDM10Q9NQV6 1147 aa19.74■□□□□ 0.75
TTC13-201ENST00000366661 FAM13BQ9NYF5 915 aa19.74■□□□□ 0.75
TTC13-201ENST00000366661 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
TTC13-201ENST00000366661 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
TTC13-201ENST00000366661 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
TTC13-201ENST00000366661 TET3O43151 1660 aa19.72■□□□□ 0.75
TTC13-201ENST00000366661 SEC24BO95487 1268 aa19.72■□□□□ 0.75
TTC13-201ENST00000366661 UGGT1Q9NYU2 1555 aa19.71■□□□□ 0.75
TTC13-201ENST00000366661 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
TTC13-201ENST00000366661 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
TTC13-201ENST00000366661 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
TTC13-201ENST00000366661 SIGLEC1Q9BZZ2 1709 aa19.69■□□□□ 0.74
TTC13-201ENST00000366661 BECN1Q14457 450 aa19.68■□□□□ 0.74
TTC13-201ENST00000366661 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
TTC13-201ENST00000366661 CLCN1P35523 988 aa19.66■□□□□ 0.74
TTC13-201ENST00000366661 ADGRF5Q8IZF2 1346 aa19.66■□□□□ 0.74
TTC13-201ENST00000366661 ESPNB1AK53 854 aa19.65■□□□□ 0.74
TTC13-201ENST00000366661 ABCC3O15438 1527 aa19.65■□□□□ 0.74
TTC13-201ENST00000366661 FBXO31Q5XUX0 539 aaPredicted RBP19.65■□□□□ 0.74
TTC13-201ENST00000366661 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
TTC13-201ENST00000366661 CEP152O94986 1710 aa19.64■□□□□ 0.74
TTC13-201ENST00000366661 RALGAPBQ86X10 1494 aa19.64■□□□□ 0.74
TTC13-201ENST00000366661 TMEM132EQ6IEE7 984 aa19.64■□□□□ 0.73
TTC13-201ENST00000366661 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
TTC13-201ENST00000366661 ERBB4Q15303 1308 aa19.63■□□□□ 0.73
TTC13-201ENST00000366661 KIAA1211Q6ZU35 1233 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms