RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 BCCIPQ9P287 314 aaKnown RBP eCLIP14.47□□□□□ -0.09
CNOT4-203ENST00000361528 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
CNOT4-203ENST00000361528 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
CNOT4-203ENST00000361528 CCDC66A2RUB6 948 aa14.46□□□□□ -0.09
CNOT4-203ENST00000361528 ZNF445P59923 1031 aa14.46□□□□□ -0.1
CNOT4-203ENST00000361528 ARHGAP31Q2M1Z3 1444 aa14.45□□□□□ -0.1
CNOT4-203ENST00000361528 GABPB1Q06547 395 aaPredicted RBP14.45□□□□□ -0.1
CNOT4-203ENST00000361528 MMP14P50281 582 aa14.45□□□□□ -0.1
CNOT4-203ENST00000361528 FEZ1Q99689 392 aa14.45□□□□□ -0.1
CNOT4-203ENST00000361528 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 USP47Q96K76 1375 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 ATP2B3Q16720 1220 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 ZNF710Q8N1W2 664 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
CNOT4-203ENST00000361528 PARD3Q8TEW0 1356 aa14.44□□□□□ -0.1
CNOT4-203ENST00000361528 KLHL40Q2TBA0 621 aa14.43□□□□□ -0.1
CNOT4-203ENST00000361528 E9PCH4 1651 aa14.43□□□□□ -0.1
CNOT4-203ENST00000361528 KDM5CP41229 1560 aa14.43□□□□□ -0.1
CNOT4-203ENST00000361528 GOLGA6L22H0YM25 854 aa14.43□□□□□ -0.1
CNOT4-203ENST00000361528 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
CNOT4-203ENST00000361528 TNPO1Q92973 898 aaKnown RBP14.43□□□□□ -0.1
CNOT4-203ENST00000361528 ZNF771Q7L3S4 317 aaPredicted RBP14.42□□□□□ -0.1
CNOT4-203ENST00000361528 YY1AP1Q9H869 796 aa14.42□□□□□ -0.1
CNOT4-203ENST00000361528 CLEC17AQ6ZS10 378 aa14.42□□□□□ -0.1
CNOT4-203ENST00000361528 SMC5Q8IY18 1101 aa14.42□□□□□ -0.1
CNOT4-203ENST00000361528 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
CNOT4-203ENST00000361528 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
CNOT4-203ENST00000361528 PANK3Q9H999 370 aa14.41□□□□□ -0.1
CNOT4-203ENST00000361528 MPHOSPH9Q99550 1183 aa14.41□□□□□ -0.1
CNOT4-203ENST00000361528 CGNL1Q0VF96 1302 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 RTEL1-TNFRSF6BF6WH68 1400 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 KIAA2012Q0VF49 1180 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 SNX21Q969T3 373 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 KIF14Q15058 1648 aa14.4□□□□□ -0.1
CNOT4-203ENST00000361528 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 TIGD1Q96MW7 591 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 KIF3AQ9Y496 699 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 CLGNO14967 610 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 KCNJ4P48050 445 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 CHMP4AQ9BY43 222 aa14.39□□□□□ -0.11
CNOT4-203ENST00000361528 ZBTB22O15209 634 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 FAM193AP78312 1265 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 AXDND1Q5T1B0 1012 aaPredicted RBP14.38□□□□□ -0.11
CNOT4-203ENST00000361528 DUSP27Q5VZP5 1158 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 C22orf23Q9BZE7 217 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 OGFRQ9NZT2 677 aa14.38□□□□□ -0.11
CNOT4-203ENST00000361528 TULP2O00295 520 aa14.37□□□□□ -0.11
CNOT4-203ENST00000361528 IGHDP01880 384 aa14.37□□□□□ -0.11
CNOT4-203ENST00000361528 GEMIN8Q9NWZ8 242 aaKnown RBP14.36□□□□□ -0.11
CNOT4-203ENST00000361528 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
CNOT4-203ENST00000361528 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
CNOT4-203ENST00000361528 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
CNOT4-203ENST00000361528 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
CNOT4-203ENST00000361528 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
CNOT4-203ENST00000361528 PMFBP1Q8TBY8 1022 aa14.34□□□□□ -0.11
CNOT4-203ENST00000361528 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
CNOT4-203ENST00000361528 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
CNOT4-203ENST00000361528 ANKRD7Q92527 254 aa14.33□□□□□ -0.12
CNOT4-203ENST00000361528 EFCC1Q9HA90 598 aa14.33□□□□□ -0.12
CNOT4-203ENST00000361528 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
CNOT4-203ENST00000361528 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
CNOT4-203ENST00000361528 CLUAP1Q96AJ1 413 aa14.33□□□□□ -0.12
CNOT4-203ENST00000361528 TCOF1Q13428 1488 aaKnown RBP14.32□□□□□ -0.12
CNOT4-203ENST00000361528 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
CNOT4-203ENST00000361528 ZNF521Q96K83 1311 aa14.31□□□□□ -0.12
CNOT4-203ENST00000361528 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
CNOT4-203ENST00000361528 EPRSP07814 1512 aaKnown RBP14.31□□□□□ -0.12
CNOT4-203ENST00000361528 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
CNOT4-203ENST00000361528 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
CNOT4-203ENST00000361528 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
CNOT4-203ENST00000361528 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 ZNF622Q969S3 477 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■□□□□ 10.1
CNOT4-203ENST00000361528 RBSNQ9H1K0 784 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 MTUS2Q5JR59 1369 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 E9PSI1 815 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
CNOT4-203ENST00000361528 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
CNOT4-203ENST00000361528 SLFN14P0C7P3 912 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 ZSCAN23Q3MJ62 389 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 UHRF1BP1Q6BDS2 1440 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 PSEN1P49768 467 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 SYCP1Q15431 976 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
CNOT4-203ENST00000361528 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
CNOT4-203ENST00000361528 NKTRP30414 1462 aaKnown RBP14.28□□□□□ -0.12
CNOT4-203ENST00000361528 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
CNOT4-203ENST00000361528 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
CNOT4-203ENST00000361528 SUPT6HQ7KZ85 1726 aaKnown RBP14.27□□□□□ -0.13
CNOT4-203ENST00000361528 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
CNOT4-203ENST00000361528 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
CNOT4-203ENST00000361528 KDM6BO15054 1643 aa14.26□□□□□ -0.13
CNOT4-203ENST00000361528 CTIFO43310 598 aaKnown RBP14.26□□□□□ -0.13
CNOT4-203ENST00000361528 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■■■■■ 54.6
CNOT4-203ENST00000361528 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms