RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 VIRMAQ69YN4 1812 aaKnown RBP24.23■■□□□ 1.47
PRPF39-201ENST00000355765 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
PRPF39-201ENST00000355765 TBC1D2Q9BYX2 928 aa24.23■■□□□ 1.47
PRPF39-201ENST00000355765 COG6Q9Y2V7 657 aa24.23■■□□□ 1.47
PRPF39-201ENST00000355765 PANK1Q8TE04 598 aa24.22■■□□□ 1.47
PRPF39-201ENST00000355765 HSP90AA1P07900 732 aaKnown RBP24.22■■□□□ 1.47
PRPF39-201ENST00000355765 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
PRPF39-201ENST00000355765 APAF1O14727 1248 aa24.21■■□□□ 1.47
PRPF39-201ENST00000355765 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
PRPF39-201ENST00000355765 CLCN1P35523 988 aa24.2■■□□□ 1.46
PRPF39-201ENST00000355765 MAPK8IP3Q9UPT6 1336 aa24.2■■□□□ 1.46
PRPF39-201ENST00000355765 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
PRPF39-201ENST00000355765 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
PRPF39-201ENST00000355765 CANXP27824 592 aaKnown RBP24.2■■□□□ 1.46
PRPF39-201ENST00000355765 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
PRPF39-201ENST00000355765 CCDC144AA2RUR9 1427 aa24.19■■□□□ 1.46
PRPF39-201ENST00000355765 FSD2A1L4K1 749 aa24.18■■□□□ 1.46
PRPF39-201ENST00000355765 CLUAP1Q96AJ1 413 aa24.18■■□□□ 1.46
PRPF39-201ENST00000355765 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
PRPF39-201ENST00000355765 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
PRPF39-201ENST00000355765 UPF2Q9HAU5 1272 aaKnown RBP24.17■■□□□ 1.46
PRPF39-201ENST00000355765 MCM4P33991 863 aa24.17■■□□□ 1.46
PRPF39-201ENST00000355765 HNRNPMP52272 730 aaKnown RBP eCLIP24.16■■□□□ 1.46
PRPF39-201ENST00000355765 GPRASP1Q5JY77 1395 aa24.16■■□□□ 1.46
PRPF39-201ENST00000355765 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
PRPF39-201ENST00000355765 TBC1D32Q96NH3 1257 aa24.15■■□□□ 1.46
PRPF39-201ENST00000355765 CGNL1Q0VF96 1302 aa24.14■■□□□ 1.45
PRPF39-201ENST00000355765 A2MP01023 1474 aa24.14■■□□□ 1.45
PRPF39-201ENST00000355765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.452e-6■■□□□ 11.5
PRPF39-201ENST00000355765 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
PRPF39-201ENST00000355765 AMER1Q5JTC6 1135 aaPredicted RBP24.13■■□□□ 1.45
PRPF39-201ENST00000355765 PTPRGP23470 1445 aa24.12■■□□□ 1.45
PRPF39-201ENST00000355765 RRP9O43818 475 aaKnown RBP24.11■■□□□ 1.45
PRPF39-201ENST00000355765 TRAK2O60296 914 aa24.1■■□□□ 1.45
PRPF39-201ENST00000355765 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
PRPF39-201ENST00000355765 E9PSI1 815 aa24.09■■□□□ 1.45
PRPF39-201ENST00000355765 FAM135AQ9P2D6 1515 aa24.09■■□□□ 1.45
PRPF39-201ENST00000355765 CENPJQ9HC77 1338 aaPredicted RBP24.09■■□□□ 1.45
PRPF39-201ENST00000355765 PDE3AQ14432 1141 aa24.08■■□□□ 1.44
PRPF39-201ENST00000355765 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
PRPF39-201ENST00000355765 TNNQ9UQP3 1299 aa24.07■■□□□ 1.44
PRPF39-201ENST00000355765 ERBB4Q15303 1308 aa24.07■■□□□ 1.44
PRPF39-201ENST00000355765 PDZRN3Q9UPQ7 1066 aa24.07■■□□□ 1.44
PRPF39-201ENST00000355765 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
PRPF39-201ENST00000355765 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
PRPF39-201ENST00000355765 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 SHANK2Q9UPX8 1470 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 ABCA8O94911 1581 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 MRE11P49959 708 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 MYH16Q9H6N6 1097 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 PLA2R1Q13018 1463 aa24.04■■□□□ 1.44
PRPF39-201ENST00000355765 PLEKHD1A6NEE1 506 aa24.03■■□□□ 1.44
PRPF39-201ENST00000355765 ESPNB1AK53 854 aa24.03■■□□□ 1.44
PRPF39-201ENST00000355765 GRPEL1Q9HAV7 217 aa24.03■■□□□ 1.44
PRPF39-201ENST00000355765 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
PRPF39-201ENST00000355765 ATP10BO94823 1461 aa24.02■■□□□ 1.44
PRPF39-201ENST00000355765 BCL2L13Q9BXK5 485 aa24.02■■□□□ 1.44
PRPF39-201ENST00000355765 NEUROD2Q15784 382 aa24.01■■□□□ 1.43
PRPF39-201ENST00000355765 CHMP5Q9NZZ3 219 aa24.01■■□□□ 1.43
PRPF39-201ENST00000355765 MFAP1P55081 439 aaKnown RBP24.01■■□□□ 1.43
PRPF39-201ENST00000355765 RLBP1P12271 317 aa24.01■■□□□ 1.43
PRPF39-201ENST00000355765 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
PRPF39-201ENST00000355765 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
PRPF39-201ENST00000355765 LAMC1P11047 1609 aa23.98■■□□□ 1.43
PRPF39-201ENST00000355765 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
PRPF39-201ENST00000355765 C22orf23Q9BZE7 217 aa23.97■■□□□ 1.43
PRPF39-201ENST00000355765 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
PRPF39-201ENST00000355765 SHROOM2Q13796 1616 aa23.96■■□□□ 1.43
PRPF39-201ENST00000355765 MYO5CQ9NQX4 1742 aa23.95■■□□□ 1.43
PRPF39-201ENST00000355765 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.42
PRPF39-201ENST00000355765 TRIM44Q96DX7 344 aaPredicted RBP23.95■■□□□ 1.42
PRPF39-201ENST00000355765 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
PRPF39-201ENST00000355765 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
PRPF39-201ENST00000355765 RARSP54136 660 aaKnown RBP23.92■■□□□ 1.42
PRPF39-201ENST00000355765 NINLQ9Y2I6 1382 aa23.92■■□□□ 1.42
PRPF39-201ENST00000355765 CCDC141Q6ZP82 1450 aa23.91■■□□□ 1.42
PRPF39-201ENST00000355765 GAS2L3Q86XJ1 694 aa23.91■■□□□ 1.42
PRPF39-201ENST00000355765 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
PRPF39-201ENST00000355765 RWDD1Q9H446 243 aaPredicted RBP23.89■■□□□ 1.42
PRPF39-201ENST00000355765 DDX11L8A8MPP1 907 aa23.89■■□□□ 1.41
PRPF39-201ENST00000355765 HSCBQ8IWL3 235 aa23.89■■□□□ 1.41
PRPF39-201ENST00000355765 RTEL1-TNFRSF6BF6WH68 1400 aa23.88■■□□□ 1.41
PRPF39-201ENST00000355765 ZNF692Q9BU19 519 aaPredicted RBP23.87■■□□□ 1.41
PRPF39-201ENST00000355765 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
PRPF39-201ENST00000355765 SYNMO15061 1565 aa23.84■■□□□ 1.41
PRPF39-201ENST00000355765 TNPO1Q92973 898 aaKnown RBP23.83■■□□□ 1.41
PRPF39-201ENST00000355765 TNNT2P45379 298 aaPredicted RBP23.82■■□□□ 1.4
PRPF39-201ENST00000355765 KIAA1211Q6ZU35 1233 aa23.82■■□□□ 1.4
PRPF39-201ENST00000355765 FOXD4L1Q9NU39 408 aa23.81■■□□□ 1.4
PRPF39-201ENST00000355765 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
PRPF39-201ENST00000355765 TPM2P07951 284 aa23.81■■□□□ 1.4
PRPF39-201ENST00000355765 PLXNC1O60486 1568 aa23.81■■□□□ 1.4
PRPF39-201ENST00000355765 ZMYM3Q14202 1370 aa23.8■■□□□ 1.4
PRPF39-201ENST00000355765 ARHGEF5Q12774 1597 aa23.79■■□□□ 1.4
PRPF39-201ENST00000355765 CARD14Q9BXL6 1004 aa23.78■■□□□ 1.4
PRPF39-201ENST00000355765 ISY1Q9ULR0 285 aaKnown RBP23.77■■□□□ 1.4
PRPF39-201ENST00000355765 TCP11L2Q8N4U5 519 aa23.77■■□□□ 1.4
PRPF39-201ENST00000355765 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
PRPF39-201ENST00000355765 NGEFQ8N5V2 710 aa23.77■■□□□ 1.4
PRPF39-201ENST00000355765 MYOM1P52179 1685 aa23.77■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms