RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
SHTN1-202ENST00000355371 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
SHTN1-202ENST00000355371 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
SHTN1-202ENST00000355371 NEXNQ0ZGT2 675 aa20.18■□□□□ 0.82
SHTN1-202ENST00000355371 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
SHTN1-202ENST00000355371 ATP6V1DQ9Y5K8 247 aa20.16■□□□□ 0.82
SHTN1-202ENST00000355371 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
SHTN1-202ENST00000355371 GNAI1P63096 354 aa20.16■□□□□ 0.82
SHTN1-202ENST00000355371 CLSTN1O94985 981 aa20.16■□□□□ 0.82
SHTN1-202ENST00000355371 SKOR2Q2VWA4 1001 aaPredicted RBP20.16■□□□□ 0.82
SHTN1-202ENST00000355371 REC8O95072 547 aa20.15■□□□□ 0.82
SHTN1-202ENST00000355371 TTC5Q8N0Z6 440 aa20.15■□□□□ 0.82
SHTN1-202ENST00000355371 LRRFIP1Q32MZ4 808 aaKnown RBP20.15■□□□□ 0.82
SHTN1-202ENST00000355371 HFM1A2PYH4 1435 aa20.15■□□□□ 0.82
SHTN1-202ENST00000355371 RUFY2Q8WXA3 655 aa20.14■□□□□ 0.82
SHTN1-202ENST00000355371 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
SHTN1-202ENST00000355371 PRXQ9BXM0 1461 aa20.14■□□□□ 0.81
SHTN1-202ENST00000355371 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
SHTN1-202ENST00000355371 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
SHTN1-202ENST00000355371 FAM69CQ0P6D2 419 aa20.12■□□□□ 0.81
SHTN1-202ENST00000355371 DIAPH3Q9NSV4 1193 aa20.12■□□□□ 0.81
SHTN1-202ENST00000355371 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
SHTN1-202ENST00000355371 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
SHTN1-202ENST00000355371 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
SHTN1-202ENST00000355371 TOMM22Q9NS69 142 aa20.11■□□□□ 0.81
SHTN1-202ENST00000355371 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
SHTN1-202ENST00000355371 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
SHTN1-202ENST00000355371 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
SHTN1-202ENST00000355371 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
SHTN1-202ENST00000355371 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
SHTN1-202ENST00000355371 EVA1CP58658 441 aa20.1■□□□□ 0.81
SHTN1-202ENST00000355371 PSME1Q06323 249 aa20.1■□□□□ 0.81
SHTN1-202ENST00000355371 H3BQV1 296 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
SHTN1-202ENST00000355371 IFFO2Q5TF58 517 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 G3V3G9 751 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 DCAF8Q5TAQ9 597 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 RASSF8Q8NHQ8 419 aa20.09■□□□□ 0.81
SHTN1-202ENST00000355371 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.81
SHTN1-202ENST00000355371 FAM184AQ8NB25 1140 aa20.08■□□□□ 0.8
SHTN1-202ENST00000355371 DDX49Q9Y6V7 483 aaKnown RBP20.07■□□□□ 0.8
SHTN1-202ENST00000355371 ZKSCAN1P17029 563 aaPredicted RBP20.07■□□□□ 0.8
SHTN1-202ENST00000355371 KIAA1107Q9UPP5 1409 aa20.07■□□□□ 0.8
SHTN1-202ENST00000355371 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
SHTN1-202ENST00000355371 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
SHTN1-202ENST00000355371 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
SHTN1-202ENST00000355371 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
SHTN1-202ENST00000355371 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
SHTN1-202ENST00000355371 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
SHTN1-202ENST00000355371 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
SHTN1-202ENST00000355371 GGNBP2Q9H3C7 697 aa20.05■□□□□ 0.8
SHTN1-202ENST00000355371 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
SHTN1-202ENST00000355371 CABP2Q9NPB3 220 aa20.05■□□□□ 0.8
SHTN1-202ENST00000355371 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
SHTN1-202ENST00000355371 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
SHTN1-202ENST00000355371 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
SHTN1-202ENST00000355371 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
SHTN1-202ENST00000355371 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
SHTN1-202ENST00000355371 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
SHTN1-202ENST00000355371 GSE1Q14687 1217 aa20.03■□□□□ 0.8
SHTN1-202ENST00000355371 INTS3Q68E01 1043 aaKnown RBP20.02■□□□□ 0.8
SHTN1-202ENST00000355371 CPLX2Q6PUV4 134 aaKnown RBP20.02■□□□□ 0.8
SHTN1-202ENST00000355371 TIAM1Q13009 1591 aa20.02■□□□□ 0.79
SHTN1-202ENST00000355371 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.79
SHTN1-202ENST00000355371 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
SHTN1-202ENST00000355371 SYNE3Q6ZMZ3 975 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 HMOX1P09601 288 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 CHMP5Q9NZZ3 219 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 RNF20Q5VTR2 975 aa20.01■□□□□ 0.79
SHTN1-202ENST00000355371 MTHFSP49914 203 aa20■□□□□ 0.79
SHTN1-202ENST00000355371 AKAP17AQ02040 695 aaKnown RBP20■□□□□ 0.79
SHTN1-202ENST00000355371 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
SHTN1-202ENST00000355371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
SHTN1-202ENST00000355371 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
SHTN1-202ENST00000355371 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
SHTN1-202ENST00000355371 ERC2O15083 957 aa19.98■□□□□ 0.79
SHTN1-202ENST00000355371 ANO2Q9NQ90 1003 aa19.98■□□□□ 0.79
SHTN1-202ENST00000355371 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
SHTN1-202ENST00000355371 NESP48681 1621 aa19.96■□□□□ 0.79
SHTN1-202ENST00000355371 GOLGA6L19H0YKK7 550 aa19.96■□□□□ 0.79
SHTN1-202ENST00000355371 MARCH6O60337 910 aa19.96■□□□□ 0.79
SHTN1-202ENST00000355371 PANK1Q8TE04 598 aa19.96■□□□□ 0.79
SHTN1-202ENST00000355371 TPM3P06753 285 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 NOC3LQ8WTT2 800 aaKnown RBP19.94■□□□□ 0.78
SHTN1-202ENST00000355371 LNPKQ9C0E8 428 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 DAPK1P53355 1430 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 NUCB2P80303 420 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 AMOTL1Q8IY63 956 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 BECN2A8MW95 431 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 ATF3P18847 181 aa19.94■□□□□ 0.78
SHTN1-202ENST00000355371 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SHTN1-202ENST00000355371 C22orf23Q9BZE7 217 aa19.93■□□□□ 0.78
SHTN1-202ENST00000355371 TRIM29Q14134 588 aa19.93■□□□□ 0.78
SHTN1-202ENST00000355371 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
SHTN1-202ENST00000355371 NOL10Q9BSC4 688 aaKnown RBP19.93■□□□□ 0.78
SHTN1-202ENST00000355371 CDC45O75419 566 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms