RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FAM184AQ8NB25 1140 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 CNTLNQ9NXG0 1405 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 ZBTB22O15209 634 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 GNL2Q13823 731 aaKnown RBP6.13□□□□□ -1.43
SKP1-202ENST00000353411 PLCD3Q8N3E9 789 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 ERICH4A6NGS2 130 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 PES1O00541 588 aaKnown RBP6.13□□□□□ -1.43
SKP1-202ENST00000353411 OFD1O75665 1012 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 CCP110O43303 1012 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 TSPY26PQ9H489 355 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 FHAD1B1AJZ9 1412 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 NEUROD2Q15784 382 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 MCTP1Q6DN14 999 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 KCTD17Q8N5Z5 321 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 RBM28Q9NW13 759 aaKnown RBP6.12□□□□□ -1.43
SKP1-202ENST00000353411 FEZ1Q99689 392 aa6.12□□□□□ -1.43
SKP1-202ENST00000353411 FANCD2Q9BXW9 1451 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 CDR1P51861 262 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 GPATCH11Q8N954 259 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 CHIC2Q9UKJ5 165 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 LMOD3Q0VAK6 560 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 TPD52L1Q16890 204 aaPredicted RBP6.11□□□□□ -1.43
SKP1-202ENST00000353411 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
SKP1-202ENST00000353411 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
SKP1-202ENST00000353411 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 TPM1P09493 284 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 CLSTN1O94985 981 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 XRCC6P12956 609 aaKnown RBP eCLIP6.11□□□□□ -1.43
SKP1-202ENST00000353411 HOMER1Q86YM7 354 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 TXLNBQ8N3L3 684 aa6.11□□□□□ -1.43
SKP1-202ENST00000353411 AKNAQ7Z591 1439 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 BECN2A8MW95 431 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 EIF3JO75822 258 aaKnown RBP6.1□□□□□ -1.43
SKP1-202ENST00000353411 P3H3Q8IVL6 736 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 ARHGAP35Q9NRY4 1499 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 NPM3O75607 178 aaKnown RBP6.1□□□□□ -1.43
SKP1-202ENST00000353411 SAMD1Q6SPF0 538 aaPredicted RBP6.1□□□□□ -1.43
SKP1-202ENST00000353411 CNKSR2Q8WXI2 1034 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 KIF2AO00139 706 aaPredicted RBP6.1□□□□□ -1.43
SKP1-202ENST00000353411 CCDC91Q7Z6B0 441 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 CREBRFQ8IUR6 639 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 KRT222Q8N1A0 295 aa6.1□□□□□ -1.43
SKP1-202ENST00000353411 ZNF622Q969S3 477 aaKnown RBP eCLIP6.1□□□□□ -1.432e-20■□□□□ 9.4
SKP1-202ENST00000353411 RRP7BPQ9NSQ0 103 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 TDO2P48775 406 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 DMTNQ08495 405 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 NINLQ9Y2I6 1382 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 TMF1P82094 1093 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 HSP90AB3PQ58FF7 597 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 RRAGDQ9NQL2 400 aaPredicted RBP6.09□□□□□ -1.43
SKP1-202ENST00000353411 ANKRD30AQ9BXX3 1397 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 KIAA0754O94854 1291 aa6.09□□□□□ -1.43
SKP1-202ENST00000353411 CCAR2Q8N163 923 aaKnown RBP6.09□□□□□ -1.43
SKP1-202ENST00000353411 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
SKP1-202ENST00000353411 GABPB1Q06547 395 aaPredicted RBP6.09□□□□□ -1.44
SKP1-202ENST00000353411 DCTN1Q14203 1278 aa6.09□□□□□ -1.44
SKP1-202ENST00000353411 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.09□□□□□ -1.44
SKP1-202ENST00000353411 PLIN1O60240 522 aa6.09□□□□□ -1.44
SKP1-202ENST00000353411 CCDC34Q96HJ3 373 aa6.09□□□□□ -1.44
SKP1-202ENST00000353411 ITPRIPQ8IWB1 547 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 WDR97A6NE52 1622 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 XPCQ01831 940 aaPredicted RBP6.08□□□□□ -1.44
SKP1-202ENST00000353411 REC8O95072 547 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 WWC1Q8IX03 1113 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 NOL10Q9BSC4 688 aaKnown RBP6.08□□□□□ -1.44
SKP1-202ENST00000353411 FAM193AP78312 1265 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 SLC26A8Q96RN1 970 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 RASSF4Q9H2L5 321 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 OGFRQ9NZT2 677 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 IVLP07476 585 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 FOXD1Q16676 465 aa6.08□□□□□ -1.44
SKP1-202ENST00000353411 RUFY1Q96T51 708 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 HDAC5Q9UQL6 1122 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 RNF214Q8ND24 703 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 PAIP2Q9BPZ3 127 aaKnown RBP6.07□□□□□ -1.44
SKP1-202ENST00000353411 BRD4O60885 1362 aaPredicted RBP6.07□□□□□ -1.44
SKP1-202ENST00000353411 TTLL5Q6EMB2 1281 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 TRIM6-TRIM34B2RNG4 842 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 TRIM34Q9BYJ4 488 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 IGSF3O75054 1194 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 ERLIN1O75477 346 aa6.07□□□□□ -1.44
SKP1-202ENST00000353411 TMCO3Q6UWJ1 677 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 PPP1R1BQ9UD71 204 aaPredicted RBP6.06□□□□□ -1.44
SKP1-202ENST00000353411 NEFHP12036 1026 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 MYCBPQ99417 103 aaPredicted RBP6.06□□□□□ -1.44
SKP1-202ENST00000353411 PAXBP1Q9Y5B6 917 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
SKP1-202ENST00000353411 SOGA1O94964 1423 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 VGLL3A8MV65 326 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 CLUAP1Q96AJ1 413 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 APBB1O00213 710 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 RABEP1Q15276 862 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 NAT10Q9H0A0 1025 aaKnown RBP6.06□□□□□ -1.44
SKP1-202ENST00000353411 HMMRO75330 724 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 TRHP20396 242 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms