RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 ARXQ96QS3 562 aa8.69□□□□□ -1.02
MSR1-202ENST00000350896 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
MSR1-202ENST00000350896 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
MSR1-202ENST00000350896 KDM5DQ9BY66 1539 aa8.69□□□□□ -1.02
MSR1-202ENST00000350896 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
MSR1-202ENST00000350896 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 ZSCAN20P17040 1043 aaPredicted RBP8.68□□□□□ -1.02
MSR1-202ENST00000350896 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
MSR1-202ENST00000350896 NBPF8Q3BBV2 869 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 NCBP3Q53F19 620 aaKnown RBP8.68□□□□□ -1.02
MSR1-202ENST00000350896 TRMT2AQ8IZ69 625 aaKnown RBP8.68□□□□□ -1.02
MSR1-202ENST00000350896 ZNF521Q96K83 1311 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
MSR1-202ENST00000350896 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
MSR1-202ENST00000350896 ZNF445P59923 1031 aa8.67□□□□□ -1.02
MSR1-202ENST00000350896 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
MSR1-202ENST00000350896 BBXQ8WY36 941 aaPredicted RBP8.67□□□□□ -1.02
MSR1-202ENST00000350896 NAP1L2Q9ULW6 460 aaPredicted RBP8.67□□□□□ -1.02
MSR1-202ENST00000350896 ADGRL2O95490 1459 aa8.67□□□□□ -1.02
MSR1-202ENST00000350896 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
MSR1-202ENST00000350896 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
MSR1-202ENST00000350896 SMC5Q8IY18 1101 aa8.66□□□□□ -1.02
MSR1-202ENST00000350896 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
MSR1-202ENST00000350896 PANK2Q9BZ23 570 aa8.66□□□□□ -1.02
MSR1-202ENST00000350896 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
MSR1-202ENST00000350896 NPC1L1Q9UHC9 1359 aa8.65□□□□□ -1.02
MSR1-202ENST00000350896 NKTRP30414 1462 aaKnown RBP8.65□□□□□ -1.02
MSR1-202ENST00000350896 KDM6BO15054 1643 aa8.65□□□□□ -1.02
MSR1-202ENST00000350896 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.03
MSR1-202ENST00000350896 ZNF692Q9BU19 519 aaPredicted RBP8.65□□□□□ -1.03
MSR1-202ENST00000350896 FEZ1Q99689 392 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 SLKQ9H2G2 1235 aaPredicted RBP8.64□□□□□ -1.03
MSR1-202ENST00000350896 RTEL1-TNFRSF6BF6WH68 1400 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 ITSN2Q9NZM3 1697 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 GPRASP1Q5JY77 1395 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 CHRM1P11229 460 aaPredicted RBP8.64□□□□□ -1.03
MSR1-202ENST00000350896 SYCP1Q15431 976 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 KLHL40Q2TBA0 621 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 EIF2AK4Q9P2K8 1649 aaKnown RBP8.64□□□□□ -1.03
MSR1-202ENST00000350896 PZPP20742 1482 aa8.64□□□□□ -1.03
MSR1-202ENST00000350896 MYRIPQ8NFW9 859 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 ZKSCAN5Q9Y2L8 839 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 PIK3C2GO75747 1445 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 PTPRGP23470 1445 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 NASPP49321 788 aaPredicted RBP8.63□□□□□ -1.03
MSR1-202ENST00000350896 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 UQCRHLA0A096LP55 91 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 UQCRHP07919 91 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 GABPB1Q06547 395 aaPredicted RBP8.63□□□□□ -1.03
MSR1-202ENST00000350896 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
MSR1-202ENST00000350896 COL17A1Q9UMD9 1497 aaPredicted RBP8.63□□□□□ -1.03
MSR1-202ENST00000350896 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
MSR1-202ENST00000350896 RAB3GAP1Q15042 981 aa8.62□□□□□ -1.03
MSR1-202ENST00000350896 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
MSR1-202ENST00000350896 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
MSR1-202ENST00000350896 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
MSR1-202ENST00000350896 DAPK1P53355 1430 aa8.62□□□□□ -1.03
MSR1-202ENST00000350896 SCAF11Q99590 1463 aaKnown RBP8.62□□□□□ -1.03
MSR1-202ENST00000350896 FTSJ3Q8IY81 847 aaKnown RBP8.62□□□□□ -1.03
MSR1-202ENST00000350896 TMEM51Q9NW97 253 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 SYNMO15061 1565 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 EIF4G3O43432 1585 aaKnown RBP8.61□□□□□ -1.03
MSR1-202ENST00000350896 NUP160Q12769 1436 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 DNAJC2Q99543 621 aaKnown RBP8.61□□□□□ -1.03
MSR1-202ENST00000350896 TRPM1Q7Z4N2 1603 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 TEX2Q8IWB9 1127 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 HSCBQ8IWL3 235 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
MSR1-202ENST00000350896 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 CCDC66A2RUB6 948 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 YY1AP1Q9H869 796 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 FAM13BQ9NYF5 915 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 ABCC10Q5T3U5 1492 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
MSR1-202ENST00000350896 PRDM15P57071 1507 aaPredicted RBP8.6□□□□□ -1.03
MSR1-202ENST00000350896 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
MSR1-202ENST00000350896 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
MSR1-202ENST00000350896 GRIN2AQ12879 1464 aa8.59□□□□□ -1.03
MSR1-202ENST00000350896 SLFN5Q08AF3 891 aa8.59□□□□□ -1.03
MSR1-202ENST00000350896 P3H3Q8IVL6 736 aa8.59□□□□□ -1.03
MSR1-202ENST00000350896 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
MSR1-202ENST00000350896 KANK1Q14678 1352 aa8.59□□□□□ -1.04
MSR1-202ENST00000350896 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
MSR1-202ENST00000350896 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
MSR1-202ENST00000350896 E9PSI1 815 aa8.58□□□□□ -1.04
MSR1-202ENST00000350896 SHANK2Q9UPX8 1470 aa8.58□□□□□ -1.04
MSR1-202ENST00000350896 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
MSR1-202ENST00000350896 TPM3P06753 285 aa8.56□□□□□ -1.04
MSR1-202ENST00000350896 ATAD2Q6PL18 1390 aa8.56□□□□□ -1.04
MSR1-202ENST00000350896 PLEKHH1Q9ULM0 1364 aa8.56□□□□□ -1.04
MSR1-202ENST00000350896 C22orf23Q9BZE7 217 aa8.56□□□□□ -1.04
MSR1-202ENST00000350896 RWDD1Q9H446 243 aaPredicted RBP8.56□□□□□ -1.04
MSR1-202ENST00000350896 ABCC5O15440 1437 aa8.56□□□□□ -1.04
MSR1-202ENST00000350896 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
MSR1-202ENST00000350896 CDCA7LQ96GN5 454 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms