RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
MBD1-203ENST00000339998 IRX6P78412 446 aaPredicted RBP21.09■□□□□ 0.97
MBD1-203ENST00000339998 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
MBD1-203ENST00000339998 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
MBD1-203ENST00000339998 SIGLEC1Q9BZZ2 1709 aa21.08■□□□□ 0.97
MBD1-203ENST00000339998 IDI1Q13907 227 aa21.06■□□□□ 0.96
MBD1-203ENST00000339998 GLI2P10070 1586 aa21.06■□□□□ 0.96
MBD1-203ENST00000339998 LAMC1P11047 1609 aa21.06■□□□□ 0.96
MBD1-203ENST00000339998 TRAK1Q9UPV9 953 aa21.05■□□□□ 0.96
MBD1-203ENST00000339998 SCAF11Q99590 1463 aaKnown RBP21.04■□□□□ 0.96
MBD1-203ENST00000339998 PNISRQ8TF01 805 aaKnown RBP21.03■□□□□ 0.96
MBD1-203ENST00000339998 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
MBD1-203ENST00000339998 IQGAP1P46940 1657 aa21.03■□□□□ 0.96
MBD1-203ENST00000339998 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
MBD1-203ENST00000339998 ADGRB3O60242 1522 aa21■□□□□ 0.95
MBD1-203ENST00000339998 MYBBP1AQ9BQG0 1328 aaKnown RBP21■□□□□ 0.95
MBD1-203ENST00000339998 STAC3Q96MF2 364 aa20.99■□□□□ 0.95
MBD1-203ENST00000339998 KTN1Q86UP2 1357 aaKnown RBP20.99■□□□□ 0.95
MBD1-203ENST00000339998 SYNMO15061 1565 aa20.99■□□□□ 0.95
MBD1-203ENST00000339998 RALBP1Q15311 655 aa20.97■□□□□ 0.95
MBD1-203ENST00000339998 MYOM2P54296 1465 aa20.97■□□□□ 0.95
MBD1-203ENST00000339998 IFT172Q9UG01 1749 aa20.97■□□□□ 0.95
MBD1-203ENST00000339998 SAFB2Q14151 953 aaKnown RBP eCLIP20.96■□□□□ 0.95
MBD1-203ENST00000339998 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
MBD1-203ENST00000339998 PARD3Q8TEW0 1356 aa20.95■□□□□ 0.94
MBD1-203ENST00000339998 NEFLP07196 543 aa20.94■□□□□ 0.94
MBD1-203ENST00000339998 C14orf93Q9H972 538 aaKnown RBP20.94■□□□□ 0.94
MBD1-203ENST00000339998 STK26Q9P289 416 aa20.92■□□□□ 0.94
MBD1-203ENST00000339998 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
MBD1-203ENST00000339998 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
MBD1-203ENST00000339998 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
MBD1-203ENST00000339998 PPLO60437 1756 aa20.92■□□□□ 0.94
MBD1-203ENST00000339998 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
MBD1-203ENST00000339998 KIF13AQ9H1H9 1805 aa20.91■□□□□ 0.94
MBD1-203ENST00000339998 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
MBD1-203ENST00000339998 NEURL4Q96JN8 1562 aa20.9■□□□□ 0.94
MBD1-203ENST00000339998 MYO5BQ9ULV0 1848 aa20.9■□□□□ 0.94
MBD1-203ENST00000339998 BRD4O60885 1362 aaPredicted RBP20.89■□□□□ 0.93
MBD1-203ENST00000339998 ERVK-7P63135 1459 aa20.89■□□□□ 0.93
MBD1-203ENST00000339998 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.93
MBD1-203ENST00000339998 CENPJQ9HC77 1338 aaPredicted RBP20.89■□□□□ 0.93
MBD1-203ENST00000339998 KIAA1210Q9ULL0 1709 aa20.88■□□□□ 0.93
MBD1-203ENST00000339998 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
MBD1-203ENST00000339998 STAG3Q9UJ98 1225 aa20.87■□□□□ 0.93
MBD1-203ENST00000339998 ARHGAP31Q2M1Z3 1444 aa20.86■□□□□ 0.93
MBD1-203ENST00000339998 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
MBD1-203ENST00000339998 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
MBD1-203ENST00000339998 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
MBD1-203ENST00000339998 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
MBD1-203ENST00000339998 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
MBD1-203ENST00000339998 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
MBD1-203ENST00000339998 RPGRIP1LQ68CZ1 1315 aa20.85■□□□□ 0.93
MBD1-203ENST00000339998 NEXMIFQ5QGS0 1516 aa20.85■□□□□ 0.93
MBD1-203ENST00000339998 PREX1Q8TCU6 1659 aa20.84■□□□□ 0.93
MBD1-203ENST00000339998 ADGRB1O14514 1584 aa20.84■□□□□ 0.93
MBD1-203ENST00000339998 LRPPRCP42704 1394 aaKnown RBP20.84■□□□□ 0.93
MBD1-203ENST00000339998 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
MBD1-203ENST00000339998 MYOM1P52179 1685 aa20.83■□□□□ 0.93
MBD1-203ENST00000339998 PPP2R1AP30153 589 aa20.81■□□□□ 0.92
MBD1-203ENST00000339998 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
MBD1-203ENST00000339998 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
MBD1-203ENST00000339998 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
MBD1-203ENST00000339998 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
MBD1-203ENST00000339998 CABP2Q9NPB3 220 aa20.79■□□□□ 0.92
MBD1-203ENST00000339998 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
MBD1-203ENST00000339998 ADAMTS8Q9UP79 889 aa20.77■□□□□ 0.92
MBD1-203ENST00000339998 SETBP1Q9Y6X0 1596 aa20.76■□□□□ 0.91
MBD1-203ENST00000339998 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
MBD1-203ENST00000339998 ESF1Q9H501 851 aaKnown RBP20.75■□□□□ 0.91
MBD1-203ENST00000339998 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
MBD1-203ENST00000339998 QRICH2Q9H0J4 1663 aa20.74■□□□□ 0.91
MBD1-203ENST00000339998 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
MBD1-203ENST00000339998 ASXL1Q8IXJ9 1541 aa20.74■□□□□ 0.91
MBD1-203ENST00000339998 CEBPAP49715 358 aaPredicted RBP20.72■□□□□ 0.91
MBD1-203ENST00000339998 PRAM1Q96QH2 718 aa20.72■□□□□ 0.91
MBD1-203ENST00000339998 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
MBD1-203ENST00000339998 AGLP35573 1532 aa20.71■□□□□ 0.91
MBD1-203ENST00000339998 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
MBD1-203ENST00000339998 MYO3AQ8NEV4 1616 aa20.7■□□□□ 0.9
MBD1-203ENST00000339998 ARHGEF40Q8TER5 1519 aa20.7■□□□□ 0.9
MBD1-203ENST00000339998 SBNO2Q9Y2G9 1366 aa20.7■□□□□ 0.9
MBD1-203ENST00000339998 SMG6Q86US8 1419 aaKnown RBP20.69■□□□□ 0.9
MBD1-203ENST00000339998 CCDC146Q8IYE0 955 aa20.69■□□□□ 0.9
MBD1-203ENST00000339998 NSD3Q9BZ95 1437 aa20.69■□□□□ 0.9
MBD1-203ENST00000339998 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
MBD1-203ENST00000339998 WAPLQ7Z5K2 1190 aa20.68■□□□□ 0.9
MBD1-203ENST00000339998 POGKQ9P215 609 aa20.68■□□□□ 0.9
MBD1-203ENST00000339998 ARHGEF28Q8N1W1 1705 aaKnown RBP20.68■□□□□ 0.9
MBD1-203ENST00000339998 REREQ9P2R6 1566 aa20.67■□□□□ 0.9
MBD1-203ENST00000339998 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
MBD1-203ENST00000339998 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
MBD1-203ENST00000339998 WDR43Q15061 677 aaKnown RBP eCLIP20.66■□□□□ 0.9
MBD1-203ENST00000339998 EVC2Q86UK5 1308 aa20.66■□□□□ 0.9
MBD1-203ENST00000339998 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
MBD1-203ENST00000339998 SLC24A1O60721 1099 aa20.64■□□□□ 0.9
MBD1-203ENST00000339998 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.9
MBD1-203ENST00000339998 ZFYVE9O95405 1425 aa20.64■□□□□ 0.89
MBD1-203ENST00000339998 YTHDC2Q9H6S0 1430 aaKnown RBP20.64■□□□□ 0.89
MBD1-203ENST00000339998 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
MBD1-203ENST00000339998 TSHZ2Q9NRE2 1034 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms