RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
SLC28A1-202ENST00000338602 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.27
SLC28A1-202ENST00000338602 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
SLC28A1-202ENST00000338602 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
SLC28A1-202ENST00000338602 HRCP23327 699 aa16.76■□□□□ 0.27
SLC28A1-202ENST00000338602 ZNF326Q5BKZ1 582 aaKnown RBP16.75■□□□□ 0.27
SLC28A1-202ENST00000338602 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
SLC28A1-202ENST00000338602 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
SLC28A1-202ENST00000338602 TRPM2O94759 1503 aa16.74■□□□□ 0.27
SLC28A1-202ENST00000338602 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
SLC28A1-202ENST00000338602 FOXD1Q16676 465 aa16.71■□□□□ 0.27
SLC28A1-202ENST00000338602 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
SLC28A1-202ENST00000338602 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
SLC28A1-202ENST00000338602 CPS1P31327 1500 aa16.69■□□□□ 0.26
SLC28A1-202ENST00000338602 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
SLC28A1-202ENST00000338602 HSPA1LP34931 641 aa16.68■□□□□ 0.26
SLC28A1-202ENST00000338602 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
SLC28A1-202ENST00000338602 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
SLC28A1-202ENST00000338602 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
SLC28A1-202ENST00000338602 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
SLC28A1-202ENST00000338602 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
SLC28A1-202ENST00000338602 KIF1BO60333 1816 aa16.66■□□□□ 0.26
SLC28A1-202ENST00000338602 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
SLC28A1-202ENST00000338602 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
SLC28A1-202ENST00000338602 TBX22Q9Y458 520 aa16.64■□□□□ 0.26
SLC28A1-202ENST00000338602 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
SLC28A1-202ENST00000338602 KCNA6P17658 529 aa16.64■□□□□ 0.25
SLC28A1-202ENST00000338602 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
SLC28A1-202ENST00000338602 PIP4K2BP78356 416 aa16.63■□□□□ 0.25
SLC28A1-202ENST00000338602 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
SLC28A1-202ENST00000338602 TOM1O60784 492 aa16.59■□□□□ 0.25
SLC28A1-202ENST00000338602 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
SLC28A1-202ENST00000338602 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
SLC28A1-202ENST00000338602 DIP2AQ14689 1571 aa16.58■□□□□ 0.25
SLC28A1-202ENST00000338602 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.24
SLC28A1-202ENST00000338602 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
SLC28A1-202ENST00000338602 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
SLC28A1-202ENST00000338602 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
SLC28A1-202ENST00000338602 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
SLC28A1-202ENST00000338602 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
SLC28A1-202ENST00000338602 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
SLC28A1-202ENST00000338602 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
SLC28A1-202ENST00000338602 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
SLC28A1-202ENST00000338602 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.24
SLC28A1-202ENST00000338602 TMEM94Q12767 1356 aa16.52■□□□□ 0.23
SLC28A1-202ENST00000338602 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
SLC28A1-202ENST00000338602 CHD2O14647 1828 aaKnown RBP16.51■□□□□ 0.23
SLC28A1-202ENST00000338602 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
SLC28A1-202ENST00000338602 PPLO60437 1756 aa16.49■□□□□ 0.23
SLC28A1-202ENST00000338602 MSH6P52701 1360 aa16.48■□□□□ 0.23
SLC28A1-202ENST00000338602 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
SLC28A1-202ENST00000338602 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
SLC28A1-202ENST00000338602 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
SLC28A1-202ENST00000338602 METP08581 1390 aa16.47■□□□□ 0.23
SLC28A1-202ENST00000338602 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
SLC28A1-202ENST00000338602 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
SLC28A1-202ENST00000338602 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
SLC28A1-202ENST00000338602 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
SLC28A1-202ENST00000338602 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
SLC28A1-202ENST00000338602 C19orf44Q9H6X5 657 aa16.43■□□□□ 0.22
SLC28A1-202ENST00000338602 MYOM2P54296 1465 aa16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 ATF3P18847 181 aa16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 RGS17Q9UGC6 210 aaPredicted RBP16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
SLC28A1-202ENST00000338602 CADPS2Q86UW7 1296 aa16.41■□□□□ 0.22
SLC28A1-202ENST00000338602 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
SLC28A1-202ENST00000338602 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
SLC28A1-202ENST00000338602 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
SLC28A1-202ENST00000338602 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
SLC28A1-202ENST00000338602 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
SLC28A1-202ENST00000338602 STK26Q9P289 416 aa16.38■□□□□ 0.21
SLC28A1-202ENST00000338602 NRXN1Q9ULB1 1477 aa16.38■□□□□ 0.21
SLC28A1-202ENST00000338602 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
SLC28A1-202ENST00000338602 SETD1AO15047 1707 aaKnown RBP16.37■□□□□ 0.21
SLC28A1-202ENST00000338602 CFAP70Q5T0N1 1121 aa16.37■□□□□ 0.21
SLC28A1-202ENST00000338602 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
SLC28A1-202ENST00000338602 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
SLC28A1-202ENST00000338602 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
SLC28A1-202ENST00000338602 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
SLC28A1-202ENST00000338602 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
SLC28A1-202ENST00000338602 LAMC1P11047 1609 aa16.35■□□□□ 0.21
SLC28A1-202ENST00000338602 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
SLC28A1-202ENST00000338602 ROBO2Q9HCK4 1378 aa16.35■□□□□ 0.21
SLC28A1-202ENST00000338602 DCCP43146 1447 aa16.34■□□□□ 0.21
SLC28A1-202ENST00000338602 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
SLC28A1-202ENST00000338602 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
SLC28A1-202ENST00000338602 SIRT1Q96EB6 747 aa16.32■□□□□ 0.2
SLC28A1-202ENST00000338602 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
SLC28A1-202ENST00000338602 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
SLC28A1-202ENST00000338602 TECPR2O15040 1411 aa16.32■□□□□ 0.2
SLC28A1-202ENST00000338602 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
SLC28A1-202ENST00000338602 POTEAQ6S8J7 498 aa16.3■□□□□ 0.2
SLC28A1-202ENST00000338602 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
SLC28A1-202ENST00000338602 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
SLC28A1-202ENST00000338602 POGKQ9P215 609 aa16.28■□□□□ 0.2
SLC28A1-202ENST00000338602 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
SLC28A1-202ENST00000338602 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.2
SLC28A1-202ENST00000338602 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms