RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 TMEM131LA2VDJ0 1609 aa18.5■□□□□ 0.55
PRIM1-201ENST00000338193 UHRF1BP1Q6BDS2 1440 aa18.5■□□□□ 0.55
PRIM1-201ENST00000338193 A2ML1A8K2U0 1454 aa18.5■□□□□ 0.55
PRIM1-201ENST00000338193 NLRP1Q9C000 1473 aa18.5■□□□□ 0.55
PRIM1-201ENST00000338193 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
PRIM1-201ENST00000338193 KCNA4P22459 653 aa18.49■□□□□ 0.55
PRIM1-201ENST00000338193 HSPA2P54652 639 aa18.48■□□□□ 0.55
PRIM1-201ENST00000338193 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
PRIM1-201ENST00000338193 KIF1BO60333 1816 aa18.45■□□□□ 0.54
PRIM1-201ENST00000338193 CCDC144AA2RUR9 1427 aa18.44■□□□□ 0.54
PRIM1-201ENST00000338193 SLC52A1Q9NWF4 448 aa18.44■□□□□ 0.54
PRIM1-201ENST00000338193 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
PRIM1-201ENST00000338193 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
PRIM1-201ENST00000338193 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
PRIM1-201ENST00000338193 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
PRIM1-201ENST00000338193 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
PRIM1-201ENST00000338193 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
PRIM1-201ENST00000338193 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
PRIM1-201ENST00000338193 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
PRIM1-201ENST00000338193 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
PRIM1-201ENST00000338193 SLIT1O75093 1534 aa18.37■□□□□ 0.53
PRIM1-201ENST00000338193 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
PRIM1-201ENST00000338193 ZFYVE9O95405 1425 aa18.37■□□□□ 0.53
PRIM1-201ENST00000338193 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
PRIM1-201ENST00000338193 LTKP29376 864 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 PPLO60437 1756 aa18.36■□□□□ 0.53
PRIM1-201ENST00000338193 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
PRIM1-201ENST00000338193 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
PRIM1-201ENST00000338193 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
PRIM1-201ENST00000338193 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
PRIM1-201ENST00000338193 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.53
PRIM1-201ENST00000338193 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
PRIM1-201ENST00000338193 SCAF11Q99590 1463 aaKnown RBP18.3■□□□□ 0.52
PRIM1-201ENST00000338193 TXNDC2Q86VQ3 553 aa18.29■□□□□ 0.52
PRIM1-201ENST00000338193 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
PRIM1-201ENST00000338193 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
PRIM1-201ENST00000338193 ADGRF5Q8IZF2 1346 aa18.27■□□□□ 0.51
PRIM1-201ENST00000338193 CHRDL2Q6WN34 429 aa18.26■□□□□ 0.51
PRIM1-201ENST00000338193 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
PRIM1-201ENST00000338193 ANKLE2Q86XL3 938 aa18.25■□□□□ 0.51
PRIM1-201ENST00000338193 MED14O60244 1454 aa18.24■□□□□ 0.51
PRIM1-201ENST00000338193 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
PRIM1-201ENST00000338193 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
PRIM1-201ENST00000338193 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
PRIM1-201ENST00000338193 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
PRIM1-201ENST00000338193 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
PRIM1-201ENST00000338193 MYOM2P54296 1465 aa18.22■□□□□ 0.51
PRIM1-201ENST00000338193 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
PRIM1-201ENST00000338193 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
PRIM1-201ENST00000338193 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.51
PRIM1-201ENST00000338193 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
PRIM1-201ENST00000338193 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
PRIM1-201ENST00000338193 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
PRIM1-201ENST00000338193 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
PRIM1-201ENST00000338193 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
PRIM1-201ENST00000338193 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
PRIM1-201ENST00000338193 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRIM1-201ENST00000338193 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
PRIM1-201ENST00000338193 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
PRIM1-201ENST00000338193 STRCP1A6NGW2 1772 aa18.17■□□□□ 0.5
PRIM1-201ENST00000338193 ALKQ9UM73 1620 aa18.17■□□□□ 0.5
PRIM1-201ENST00000338193 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
PRIM1-201ENST00000338193 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
PRIM1-201ENST00000338193 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
PRIM1-201ENST00000338193 BCANQ96GW7 911 aa18.14■□□□□ 0.49
PRIM1-201ENST00000338193 METP08581 1390 aa18.13■□□□□ 0.49
PRIM1-201ENST00000338193 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
PRIM1-201ENST00000338193 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
PRIM1-201ENST00000338193 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
PRIM1-201ENST00000338193 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
PRIM1-201ENST00000338193 DIP2AQ14689 1571 aa18.11■□□□□ 0.49
PRIM1-201ENST00000338193 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
PRIM1-201ENST00000338193 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
PRIM1-201ENST00000338193 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
PRIM1-201ENST00000338193 POLA2Q14181 598 aa18.09■□□□□ 0.49
PRIM1-201ENST00000338193 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
PRIM1-201ENST00000338193 LAMC1P11047 1609 aa18.09■□□□□ 0.49
PRIM1-201ENST00000338193 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.49
PRIM1-201ENST00000338193 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.49
PRIM1-201ENST00000338193 TBX22Q9Y458 520 aa18.08■□□□□ 0.49
PRIM1-201ENST00000338193 XRN1Q8IZH2 1706 aaKnown RBP18.07■□□□□ 0.48
PRIM1-201ENST00000338193 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
PRIM1-201ENST00000338193 NWD1Q149M9 1564 aa18.06■□□□□ 0.48
PRIM1-201ENST00000338193 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
PRIM1-201ENST00000338193 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
PRIM1-201ENST00000338193 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
PRIM1-201ENST00000338193 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.47
PRIM1-201ENST00000338193 KCNA6P17658 529 aa18.02■□□□□ 0.47
PRIM1-201ENST00000338193 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.47
PRIM1-201ENST00000338193 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.47
PRIM1-201ENST00000338193 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.47
PRIM1-201ENST00000338193 STK26Q9P289 416 aa18.01■□□□□ 0.47
PRIM1-201ENST00000338193 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
PRIM1-201ENST00000338193 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
PRIM1-201ENST00000338193 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
PRIM1-201ENST00000338193 LRPPRCP42704 1394 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms