RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
HIF1A-202ENST00000337138 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
HIF1A-202ENST00000337138 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
HIF1A-202ENST00000337138 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
HIF1A-202ENST00000337138 TRAPPC8Q9Y2L5 1435 aa13.54□□□□□ -0.24
HIF1A-202ENST00000337138 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
HIF1A-202ENST00000337138 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
HIF1A-202ENST00000337138 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
HIF1A-202ENST00000337138 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.24
HIF1A-202ENST00000337138 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.24
HIF1A-202ENST00000337138 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.24
HIF1A-202ENST00000337138 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
HIF1A-202ENST00000337138 FRMPD1Q5SYB0 1578 aa13.52□□□□□ -0.25
HIF1A-202ENST00000337138 PIK3C2BO00750 1634 aa13.52□□□□□ -0.25
HIF1A-202ENST00000337138 KIF1BO60333 1816 aa13.51□□□□□ -0.25
HIF1A-202ENST00000337138 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
HIF1A-202ENST00000337138 MYOM2P54296 1465 aa13.5□□□□□ -0.25
HIF1A-202ENST00000337138 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
HIF1A-202ENST00000337138 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
HIF1A-202ENST00000337138 SETBP1Q9Y6X0 1596 aa13.5□□□□□ -0.25
HIF1A-202ENST00000337138 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
HIF1A-202ENST00000337138 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
HIF1A-202ENST00000337138 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 RALBP1Q15311 655 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 SKAP1Q86WV1 359 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 PLIN1O60240 522 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
HIF1A-202ENST00000337138 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
HIF1A-202ENST00000337138 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
HIF1A-202ENST00000337138 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
HIF1A-202ENST00000337138 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
HIF1A-202ENST00000337138 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
HIF1A-202ENST00000337138 ERVK-7P63135 1459 aa13.45□□□□□ -0.26
HIF1A-202ENST00000337138 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
HIF1A-202ENST00000337138 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
HIF1A-202ENST00000337138 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
HIF1A-202ENST00000337138 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
HIF1A-202ENST00000337138 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
HIF1A-202ENST00000337138 PIK3C2GO75747 1445 aa13.43□□□□□ -0.26
HIF1A-202ENST00000337138 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
HIF1A-202ENST00000337138 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
HIF1A-202ENST00000337138 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
HIF1A-202ENST00000337138 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
HIF1A-202ENST00000337138 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
HIF1A-202ENST00000337138 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
HIF1A-202ENST00000337138 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
HIF1A-202ENST00000337138 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
HIF1A-202ENST00000337138 HECW2Q9P2P5 1572 aa13.4□□□□□ -0.26
HIF1A-202ENST00000337138 IPO9Q96P70 1041 aaKnown RBP13.4□□□□□ -0.26
HIF1A-202ENST00000337138 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.27
HIF1A-202ENST00000337138 NEFMP07197 916 aa13.39□□□□□ -0.27
HIF1A-202ENST00000337138 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
HIF1A-202ENST00000337138 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
HIF1A-202ENST00000337138 ARXQ96QS3 562 aa13.38□□□□□ -0.27
HIF1A-202ENST00000337138 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
HIF1A-202ENST00000337138 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
HIF1A-202ENST00000337138 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
HIF1A-202ENST00000337138 CAMSAP1Q5T5Y3 1602 aa13.37□□□□□ -0.27
HIF1A-202ENST00000337138 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
HIF1A-202ENST00000337138 PDE3BQ13370 1112 aa13.36□□□□□ -0.27
HIF1A-202ENST00000337138 FANCAO15360 1455 aa13.36□□□□□ -0.27
HIF1A-202ENST00000337138 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
HIF1A-202ENST00000337138 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
HIF1A-202ENST00000337138 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
HIF1A-202ENST00000337138 SENP3Q9H4L4 574 aaPredicted RBP13.34□□□□□ -0.27
HIF1A-202ENST00000337138 RICTORQ6R327 1708 aa13.34□□□□□ -0.27
HIF1A-202ENST00000337138 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
HIF1A-202ENST00000337138 RGS3P49796 1198 aa13.33□□□□□ -0.28
HIF1A-202ENST00000337138 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
HIF1A-202ENST00000337138 PDE4AP27815 886 aa13.32□□□□□ -0.28
HIF1A-202ENST00000337138 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
HIF1A-202ENST00000337138 NEXMIFQ5QGS0 1516 aa13.31□□□□□ -0.28
HIF1A-202ENST00000337138 PANK3Q9H999 370 aa13.31□□□□□ -0.28
HIF1A-202ENST00000337138 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
HIF1A-202ENST00000337138 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
HIF1A-202ENST00000337138 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
HIF1A-202ENST00000337138 C20orf194Q5TEA3 1177 aa13.29□□□□□ -0.28
HIF1A-202ENST00000337138 GLI2P10070 1586 aa13.29□□□□□ -0.28
HIF1A-202ENST00000337138 ABCC3O15438 1527 aa13.28□□□□□ -0.28
HIF1A-202ENST00000337138 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
HIF1A-202ENST00000337138 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.28
HIF1A-202ENST00000337138 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.28
HIF1A-202ENST00000337138 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
HIF1A-202ENST00000337138 CFAP74Q9C0B2 1584 aa13.26□□□□□ -0.29
HIF1A-202ENST00000337138 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
HIF1A-202ENST00000337138 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
HIF1A-202ENST00000337138 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
HIF1A-202ENST00000337138 MS4A1P11836 297 aa13.25□□□□□ -0.29
HIF1A-202ENST00000337138 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
HIF1A-202ENST00000337138 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
HIF1A-202ENST00000337138 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
HIF1A-202ENST00000337138 MLH3Q9UHC1 1453 aa13.25□□□□□ -0.29
HIF1A-202ENST00000337138 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
HIF1A-202ENST00000337138 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
HIF1A-202ENST00000337138 TCERG1O14776 1098 aaKnown RBP13.23□□□□□ -0.29
HIF1A-202ENST00000337138 NOS1P29475 1434 aa13.23□□□□□ -0.29
HIF1A-202ENST00000337138 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
HIF1A-202ENST00000337138 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
HIF1A-202ENST00000337138 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 320.5 ms