RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
SPNS1-203ENST00000334536 DDRGK1Q96HY6 314 aa27.09■■□□□ 1.93
SPNS1-203ENST00000334536 CEP152O94986 1710 aa27.09■■□□□ 1.93
SPNS1-203ENST00000334536 TET3O43151 1660 aa27.07■■□□□ 1.92
SPNS1-203ENST00000334536 IQGAP1P46940 1657 aa27.07■■□□□ 1.92
SPNS1-203ENST00000334536 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
SPNS1-203ENST00000334536 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
SPNS1-203ENST00000334536 LAS1LQ9Y4W2 734 aaKnown RBP27.06■■□□□ 1.92
SPNS1-203ENST00000334536 NEURL4Q96JN8 1562 aa27.06■■□□□ 1.92
SPNS1-203ENST00000334536 BLMP54132 1417 aaPredicted RBP27.06■■□□□ 1.92
SPNS1-203ENST00000334536 MS4A1P11836 297 aa27.06■■□□□ 1.92
SPNS1-203ENST00000334536 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
SPNS1-203ENST00000334536 KANK1Q14678 1352 aa27.05■■□□□ 1.92
SPNS1-203ENST00000334536 ABCA9Q8IUA7 1624 aa27.05■■□□□ 1.92
SPNS1-203ENST00000334536 AFAP1Q8N556 730 aa27.04■■□□□ 1.92
SPNS1-203ENST00000334536 INO80Q9ULG1 1556 aaPredicted RBP27.04■■□□□ 1.92
SPNS1-203ENST00000334536 CDCA8Q53HL2 280 aa27.04■■□□□ 1.92
SPNS1-203ENST00000334536 RRP1P56182 461 aaKnown RBP27.03■■□□□ 1.92
SPNS1-203ENST00000334536 DAXXQ9UER7 740 aaPredicted RBP27.03■■□□□ 1.92
SPNS1-203ENST00000334536 ATP7AQ04656 1500 aa27.03■■□□□ 1.92
SPNS1-203ENST00000334536 SCAF11Q99590 1463 aaKnown RBP27.02■■□□□ 1.92
SPNS1-203ENST00000334536 CC2D1BQ5T0F9 858 aaKnown RBP27.02■■□□□ 1.92
SPNS1-203ENST00000334536 RCAN3Q9UKA8 241 aa27.02■■□□□ 1.92
SPNS1-203ENST00000334536 CLTCL1P53675 1640 aa27.01■■□□□ 1.91
SPNS1-203ENST00000334536 ASXL2Q76L83 1435 aa27.01■■□□□ 1.91
SPNS1-203ENST00000334536 FANCAO15360 1455 aa27■■□□□ 1.91
SPNS1-203ENST00000334536 NPM1P06748 294 aaKnown RBP eCLIP26.99■■□□□ 1.91
SPNS1-203ENST00000334536 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
SPNS1-203ENST00000334536 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
SPNS1-203ENST00000334536 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
SPNS1-203ENST00000334536 SLC24A1O60721 1099 aa26.99■■□□□ 1.91
SPNS1-203ENST00000334536 ZMYND15Q9H091 742 aa26.99■■□□□ 1.91
SPNS1-203ENST00000334536 KIAA1210Q9ULL0 1709 aa26.98■■□□□ 1.91
SPNS1-203ENST00000334536 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
SPNS1-203ENST00000334536 SYNMO15061 1565 aa26.96■■□□□ 1.91
SPNS1-203ENST00000334536 EIF3AQ14152 1382 aaKnown RBP26.94■■□□□ 1.9
SPNS1-203ENST00000334536 BACH2Q9BYV9 841 aa26.94■■□□□ 1.9
SPNS1-203ENST00000334536 FRAT1Q92837 279 aaPredicted RBP26.93■■□□□ 1.9
SPNS1-203ENST00000334536 KNSTRNQ9Y448 316 aa26.93■■□□□ 1.9
SPNS1-203ENST00000334536 PODXL2Q9NZ53 605 aa26.92■■□□□ 1.9
SPNS1-203ENST00000334536 ADGRL1O94910 1474 aa26.91■■□□□ 1.9
SPNS1-203ENST00000334536 PDE4AP27815 886 aa26.91■■□□□ 1.9
SPNS1-203ENST00000334536 NPC1L1Q9UHC9 1359 aa26.91■■□□□ 1.9
SPNS1-203ENST00000334536 NFKBIBQ15653 356 aa26.9■■□□□ 1.9
SPNS1-203ENST00000334536 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
SPNS1-203ENST00000334536 MYOM2P54296 1465 aa26.89■■□□□ 1.9
SPNS1-203ENST00000334536 RRP9O43818 475 aaKnown RBP26.89■■□□□ 1.89
SPNS1-203ENST00000334536 KIF3BO15066 747 aa26.88■■□□□ 1.89
SPNS1-203ENST00000334536 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
SPNS1-203ENST00000334536 AMER1Q5JTC6 1135 aaPredicted RBP26.87■■□□□ 1.89
SPNS1-203ENST00000334536 VSIG10Q8N0Z9 540 aa26.87■■□□□ 1.89
SPNS1-203ENST00000334536 ASXL1Q8IXJ9 1541 aa26.87■■□□□ 1.89
SPNS1-203ENST00000334536 NPM2Q86SE8 214 aaKnown RBP26.87■■□□□ 1.89
SPNS1-203ENST00000334536 PPP2R1AP30153 589 aa26.86■■□□□ 1.89
SPNS1-203ENST00000334536 EXOC6Q8TAG9 804 aa26.85■■□□□ 1.89
SPNS1-203ENST00000334536 CDCA7LQ96GN5 454 aa26.84■■□□□ 1.89
SPNS1-203ENST00000334536 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
SPNS1-203ENST00000334536 MAP3K4Q9Y6R4 1608 aa26.84■■□□□ 1.89
SPNS1-203ENST00000334536 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.88
SPNS1-203ENST00000334536 EFCAB6Q5THR3 1501 aa26.82■■□□□ 1.88
SPNS1-203ENST00000334536 KDM5AP29375 1690 aaKnown RBP26.81■■□□□ 1.88
SPNS1-203ENST00000334536 MYOM1P52179 1685 aa26.81■■□□□ 1.88
SPNS1-203ENST00000334536 ADAMTS8Q9UP79 889 aa26.8■■□□□ 1.88
SPNS1-203ENST00000334536 WDR43Q15061 677 aaKnown RBP eCLIP26.79■■□□□ 1.88
SPNS1-203ENST00000334536 KIF1BO60333 1816 aa26.79■■□□□ 1.88
SPNS1-203ENST00000334536 ABCA6Q8N139 1617 aa26.77■■□□□ 1.88
SPNS1-203ENST00000334536 KIDINS220Q9ULH0 1771 aa26.77■■□□□ 1.88
SPNS1-203ENST00000334536 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
SPNS1-203ENST00000334536 IFT172Q9UG01 1749 aa26.76■■□□□ 1.87
SPNS1-203ENST00000334536 ZNF518AQ6AHZ1 1483 aa26.76■■□□□ 1.87
SPNS1-203ENST00000334536 HSP90AA2PQ14568 343 aaPredicted RBP26.73■■□□□ 1.87
SPNS1-203ENST00000334536 PPRC1Q5VV67 1664 aaKnown RBP26.72■■□□□ 1.87
SPNS1-203ENST00000334536 ERVK-7P63135 1459 aa26.72■■□□□ 1.87
SPNS1-203ENST00000334536 SBNO2Q9Y2G9 1366 aa26.72■■□□□ 1.87
SPNS1-203ENST00000334536 CFAP70Q5T0N1 1121 aa26.72■■□□□ 1.87
SPNS1-203ENST00000334536 MYO3AQ8NEV4 1616 aa26.71■■□□□ 1.87
SPNS1-203ENST00000334536 ADGRF5Q8IZF2 1346 aa26.71■■□□□ 1.87
SPNS1-203ENST00000334536 ZNF521Q96K83 1311 aa26.71■■□□□ 1.87
SPNS1-203ENST00000334536 CFAP74Q9C0B2 1584 aa26.7■■□□□ 1.87
SPNS1-203ENST00000334536 UGGT1Q9NYU2 1555 aa26.7■■□□□ 1.87
SPNS1-203ENST00000334536 CD109Q6YHK3 1445 aa26.69■■□□□ 1.86
SPNS1-203ENST00000334536 SETBP1Q9Y6X0 1596 aa26.68■■□□□ 1.86
SPNS1-203ENST00000334536 ADGRB3O60242 1522 aa26.68■■□□□ 1.86
SPNS1-203ENST00000334536 PLEKHH1Q9ULM0 1364 aa26.68■■□□□ 1.86
SPNS1-203ENST00000334536 GOLGA2Q08379 1002 aa26.66■■□□□ 1.86
SPNS1-203ENST00000334536 L1TD1Q5T7N2 865 aaKnown RBP26.66■■□□□ 1.86
SPNS1-203ENST00000334536 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
SPNS1-203ENST00000334536 HSP90AA1P07900 732 aaKnown RBP26.65■■□□□ 1.86
SPNS1-203ENST00000334536 DUSP27Q5VZP5 1158 aa26.65■■□□□ 1.86
SPNS1-203ENST00000334536 MLH3Q9UHC1 1453 aa26.64■■□□□ 1.86
SPNS1-203ENST00000334536 NGEFQ8N5V2 710 aa26.64■■□□□ 1.86
SPNS1-203ENST00000334536 CRBNQ96SW2 442 aa26.64■■□□□ 1.86
SPNS1-203ENST00000334536 PLIN1O60240 522 aa26.63■■□□□ 1.85
SPNS1-203ENST00000334536 POGZQ7Z3K3 1410 aa26.62■■□□□ 1.85
SPNS1-203ENST00000334536 PLEKHG5O94827 1062 aa26.6■■□□□ 1.85
SPNS1-203ENST00000334536 NOS1P29475 1434 aa26.6■■□□□ 1.85
SPNS1-203ENST00000334536 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.6■■□□□ 1.85
SPNS1-203ENST00000334536 RRAGDQ9NQL2 400 aaPredicted RBP26.6■■□□□ 1.85
SPNS1-203ENST00000334536 RPGRIP1LQ68CZ1 1315 aa26.59■■□□□ 1.85
SPNS1-203ENST00000334536 SLFN5Q08AF3 891 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms