RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.94□□□□□ -0.82
USP16-201ENST00000334352 SHPRHQ149N8 1683 aa9.94□□□□□ -0.82
USP16-201ENST00000334352 KIF1BO60333 1816 aa9.94□□□□□ -0.82
USP16-201ENST00000334352 IFT172Q9UG01 1749 aa9.94□□□□□ -0.82
USP16-201ENST00000334352 TOM1O60784 492 aa9.94□□□□□ -0.82
USP16-201ENST00000334352 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
USP16-201ENST00000334352 KCNA6P17658 529 aa9.93□□□□□ -0.82
USP16-201ENST00000334352 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
USP16-201ENST00000334352 NEXMIFQ5QGS0 1516 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 HFM1A2PYH4 1435 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 EID1Q9Y6B2 187 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 ADAMTS13Q76LX8 1427 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 RIMS2Q9UQ26 1411 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 TBX22Q9Y458 520 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 PPLO60437 1756 aa9.92□□□□□ -0.82
USP16-201ENST00000334352 CLTCL1P53675 1640 aa9.91□□□□□ -0.82
USP16-201ENST00000334352 NHSL1Q5SYE7 1610 aa9.91□□□□□ -0.82
USP16-201ENST00000334352 LTKP29376 864 aa9.9□□□□□ -0.82
USP16-201ENST00000334352 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.82
USP16-201ENST00000334352 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.82
USP16-201ENST00000334352 IDI1Q13907 227 aa9.9□□□□□ -0.83
USP16-201ENST00000334352 NAIPQ13075 1403 aa9.89□□□□□ -0.83
USP16-201ENST00000334352 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
USP16-201ENST00000334352 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.88□□□□□ -0.83
USP16-201ENST00000334352 TXNDC2Q86VQ3 553 aa9.88□□□□□ -0.83
USP16-201ENST00000334352 PTCH1Q13635 1447 aa9.87□□□□□ -0.83
USP16-201ENST00000334352 RPGRIP1LQ68CZ1 1315 aa9.87□□□□□ -0.83
USP16-201ENST00000334352 CFAP65Q6ZU64 1925 aaKnown RBP9.87□□□□□ -0.83
USP16-201ENST00000334352 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
USP16-201ENST00000334352 PHLPP1O60346 1717 aa9.86□□□□□ -0.83
USP16-201ENST00000334352 COL22A1Q8NFW1 1626 aaPredicted RBP9.86□□□□□ -0.83
USP16-201ENST00000334352 SOCS7O14512 581 aa9.85□□□□□ -0.83
USP16-201ENST00000334352 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
USP16-201ENST00000334352 NRXN1Q9ULB1 1477 aa9.84□□□□□ -0.83
USP16-201ENST00000334352 TECPR2O15040 1411 aa9.84□□□□□ -0.83
USP16-201ENST00000334352 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
USP16-201ENST00000334352 CDC42BPGQ6DT37 1551 aa9.82□□□□□ -0.84
USP16-201ENST00000334352 NALCNQ8IZF0 1738 aa9.82□□□□□ -0.84
USP16-201ENST00000334352 TMEM94Q12767 1356 aa9.81□□□□□ -0.84
USP16-201ENST00000334352 HRCP23327 699 aa9.81□□□□□ -0.84
USP16-201ENST00000334352 NUP155O75694 1391 aa9.81□□□□□ -0.84
USP16-201ENST00000334352 PTPRUQ92729 1446 aa9.81□□□□□ -0.84
USP16-201ENST00000334352 SETD5Q9C0A6 1442 aa9.81□□□□□ -0.84
USP16-201ENST00000334352 MYOM2P54296 1465 aa9.8□□□□□ -0.84
USP16-201ENST00000334352 MSH6P52701 1360 aa9.8□□□□□ -0.84
USP16-201ENST00000334352 DLC1Q96QB1 1528 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 HSPA1LP34931 641 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 DISP3Q9P2K9 1392 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 SPATA31E1Q6ZUB1 1445 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 ADGRL3Q9HAR2 1447 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 KIF1AQ12756 1690 aa9.79□□□□□ -0.84
USP16-201ENST00000334352 ADGRB2O60241 1585 aa9.78□□□□□ -0.84
USP16-201ENST00000334352 ASXL1Q8IXJ9 1541 aa9.78□□□□□ -0.84
USP16-201ENST00000334352 SPATA31A6Q5VVP1 1343 aa9.77□□□□□ -0.85
USP16-201ENST00000334352 MST1RQ04912 1400 aa9.77□□□□□ -0.85
USP16-201ENST00000334352 JCADQ9P266 1359 aa9.77□□□□□ -0.85
USP16-201ENST00000334352 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.77□□□□□ -0.85
USP16-201ENST00000334352 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
USP16-201ENST00000334352 MARF1Q9Y4F3 1742 aaKnown RBP9.77□□□□□ -0.85
USP16-201ENST00000334352 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
USP16-201ENST00000334352 CHIC2Q9UKJ5 165 aa9.76□□□□□ -0.85
USP16-201ENST00000334352 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
USP16-201ENST00000334352 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
USP16-201ENST00000334352 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
USP16-201ENST00000334352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.853e-8■□□□□ 10.7
USP16-201ENST00000334352 C19orf44Q9H6X5 657 aa9.74□□□□□ -0.85
USP16-201ENST00000334352 CADPS2Q86UW7 1296 aa9.74□□□□□ -0.85
USP16-201ENST00000334352 STAG3Q9UJ98 1225 aa9.74□□□□□ -0.85
USP16-201ENST00000334352 ILDR2Q71H61 639 aa9.73□□□□□ -0.85
USP16-201ENST00000334352 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
USP16-201ENST00000334352 PROSER2Q86WR7 435 aaPredicted RBP9.72□□□□□ -0.85
USP16-201ENST00000334352 SLAIN2Q9P270 581 aa9.71□□□□□ -0.85
USP16-201ENST00000334352 ABCC11Q96J66 1382 aa9.71□□□□□ -0.86
USP16-201ENST00000334352 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.86
USP16-201ENST00000334352 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
USP16-201ENST00000334352 METP08581 1390 aa9.69□□□□□ -0.86
USP16-201ENST00000334352 C1orf167Q5SNV9 1468 aa9.68□□□□□ -0.86
USP16-201ENST00000334352 LRP6O75581 1613 aa9.68□□□□□ -0.86
USP16-201ENST00000334352 PXDNQ92626 1479 aa9.67□□□□□ -0.86
USP16-201ENST00000334352 AMOTL2Q9Y2J4 779 aa9.67□□□□□ -0.86
USP16-201ENST00000334352 NWD2Q9ULI1 1742 aa9.67□□□□□ -0.86
USP16-201ENST00000334352 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
USP16-201ENST00000334352 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
USP16-201ENST00000334352 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
USP16-201ENST00000334352 ABCA3Q99758 1704 aa9.66□□□□□ -0.86
USP16-201ENST00000334352 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
USP16-201ENST00000334352 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
USP16-201ENST00000334352 CRYBG1Q9Y4K1 1723 aa9.66□□□□□ -0.86
USP16-201ENST00000334352 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.86
USP16-201ENST00000334352 SOS2Q07890 1332 aaPredicted RBP9.65□□□□□ -0.86
USP16-201ENST00000334352 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
USP16-201ENST00000334352 ITSN1Q15811 1721 aa9.65□□□□□ -0.87
USP16-201ENST00000334352 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
USP16-201ENST00000334352 PNPLA6Q8IY17 1366 aa9.64□□□□□ -0.87
USP16-201ENST00000334352 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
USP16-201ENST00000334352 BRINP3Q76B58 766 aa9.63□□□□□ -0.87
USP16-201ENST00000334352 ATF3P18847 181 aa9.63□□□□□ -0.87
USP16-201ENST00000334352 ROBO2Q9HCK4 1378 aa9.63□□□□□ -0.87
USP16-201ENST00000334352 USP32Q8NFA0 1604 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms