RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 LMTK2Q8IWU2 1503 aa4.31□□□□□ -1.72
RGPD6-201ENST00000329516 SETD5Q9C0A6 1442 aa4.31□□□□□ -1.72
RGPD6-201ENST00000329516 CAMTA1Q9Y6Y1 1673 aa4.31□□□□□ -1.72
RGPD6-201ENST00000329516 TESK2Q96S53 571 aa4.31□□□□□ -1.72
RGPD6-201ENST00000329516 LRRC37A3O60309 1634 aa4.31□□□□□ -1.72
RGPD6-201ENST00000329516 EIF2AK4Q9P2K8 1649 aaKnown RBP4.31□□□□□ -1.72
RGPD6-201ENST00000329516 PHF23Q9BUL5 403 aaPredicted RBP4.3□□□□□ -1.72
RGPD6-201ENST00000329516 ATP7AQ04656 1500 aa4.3□□□□□ -1.72
RGPD6-201ENST00000329516 ZNF644Q9H582 1327 aaPredicted RBP4.3□□□□□ -1.72
RGPD6-201ENST00000329516 PDS5BQ9NTI5 1447 aa4.29□□□□□ -1.72
RGPD6-201ENST00000329516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.29□□□□□ -1.72
RGPD6-201ENST00000329516 CEP170BQ9Y4F5 1589 aaPredicted RBP4.29□□□□□ -1.72
RGPD6-201ENST00000329516 XRN1Q8IZH2 1706 aaKnown RBP4.29□□□□□ -1.72
RGPD6-201ENST00000329516 ZMYM4Q5VZL5 1548 aa4.28□□□□□ -1.72
RGPD6-201ENST00000329516 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.28□□□□□ -1.72
RGPD6-201ENST00000329516 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
RGPD6-201ENST00000329516 PRG4Q92954 1404 aaPredicted RBP4.27□□□□□ -1.73
RGPD6-201ENST00000329516 DMRT2Q9Y5R5 561 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 C3P01024 1663 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 TRPM3Q9HCF6 1732 aaPredicted RBP4.27□□□□□ -1.73
RGPD6-201ENST00000329516 NEXMIFQ5QGS0 1516 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 TULP4Q9NRJ4 1543 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 RGPD8O14715 1765 aaPredicted RBP4.27□□□□□ -1.73
RGPD6-201ENST00000329516 NHSQ6T4R5 1651 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 CELSR1Q9NYQ6 3014 aa4.27□□□□□ -1.73
RGPD6-201ENST00000329516 PRKCSHP14314 528 aaPredicted RBP4.26□□□□□ -1.73
RGPD6-201ENST00000329516 UACAQ9BZF9 1416 aa4.26□□□□□ -1.73
RGPD6-201ENST00000329516 SHANK2Q9UPX8 1470 aa4.26□□□□□ -1.73
RGPD6-201ENST00000329516 ARAP3Q8WWN8 1544 aa4.26□□□□□ -1.73
RGPD6-201ENST00000329516 HECW2Q9P2P5 1572 aa4.26□□□□□ -1.73
RGPD6-201ENST00000329516 ITGB4P16144 1822 aa4.25□□□□□ -1.73
RGPD6-201ENST00000329516 CRYBG3Q68DQ2 2970 aa4.25□□□□□ -1.73
RGPD6-201ENST00000329516 CUBNO60494 3623 aa4.25□□□□□ -1.73
RGPD6-201ENST00000329516 DAPK1P53355 1430 aa4.25□□□□□ -1.73
RGPD6-201ENST00000329516 MED1Q15648 1581 aaPredicted RBP4.25□□□□□ -1.73
RGPD6-201ENST00000329516 TSHZ2Q9NRE2 1034 aa4.25□□□□□ -1.73
RGPD6-201ENST00000329516 QRICH2Q9H0J4 1663 aa4.24□□□□□ -1.73
RGPD6-201ENST00000329516 PRAG1Q86YV5 1406 aa4.24□□□□□ -1.73
RGPD6-201ENST00000329516 DSPP15924 2871 aaKnown RBP4.24□□□□□ -1.73
RGPD6-201ENST00000329516 COL18A1P39060 1754 aa4.24□□□□□ -1.73
RGPD6-201ENST00000329516 AKAP12Q02952 1782 aa4.24□□□□□ -1.73
RGPD6-201ENST00000329516 CCNB3Q8WWL7 1395 aa4.23□□□□□ -1.73
RGPD6-201ENST00000329516 KIF1AQ12756 1690 aa4.23□□□□□ -1.73
RGPD6-201ENST00000329516 CARMIL1Q5VZK9 1371 aa4.23□□□□□ -1.73
RGPD6-201ENST00000329516 CELSR2Q9HCU4 2923 aa4.23□□□□□ -1.73
RGPD6-201ENST00000329516 DIP2CQ9Y2E4 1556 aa4.22□□□□□ -1.73
RGPD6-201ENST00000329516 PLCH2O75038 1416 aa4.22□□□□□ -1.73
RGPD6-201ENST00000329516 MON2Q7Z3U7 1717 aa4.22□□□□□ -1.73
RGPD6-201ENST00000329516 SPINK5Q9NQ38 1064 aaPredicted RBP4.22□□□□□ -1.73
RGPD6-201ENST00000329516 ERVK-7P63135 1459 aa4.22□□□□□ -1.73
RGPD6-201ENST00000329516 A0A1B0GUL6 1792 aa4.22□□□□□ -1.73
RGPD6-201ENST00000329516 MLH3Q9UHC1 1453 aa4.21□□□□□ -1.74
RGPD6-201ENST00000329516 TRMT2AQ8IZ69 625 aaKnown RBP4.21□□□□□ -1.74
RGPD6-201ENST00000329516 RGS12O14924 1447 aa4.21□□□□□ -1.74
RGPD6-201ENST00000329516 SSH2Q76I76 1423 aa4.21□□□□□ -1.74
RGPD6-201ENST00000329516 ACIN1Q9UKV3 1341 aaKnown RBP4.21□□□□□ -1.74
RGPD6-201ENST00000329516 TRPM2O94759 1503 aa4.21□□□□□ -1.74
RGPD6-201ENST00000329516 CCDC18Q5T9S5 1454 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 ROCK1Q13464 1354 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 COL22A1Q8NFW1 1626 aaPredicted RBP4.2□□□□□ -1.74
RGPD6-201ENST00000329516 RGPD2P0DJD1 1756 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 PIK3C2AO00443 1686 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 ERCC6Q03468 1493 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 RALGAPBQ86X10 1494 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 FHAD1B1AJZ9 1412 aa4.2□□□□□ -1.74
RGPD6-201ENST00000329516 FAM208AQ9UK61 1670 aaKnown RBP4.2□□□□□ -1.74
RGPD6-201ENST00000329516 CD109Q6YHK3 1445 aa4.19□□□□□ -1.74
RGPD6-201ENST00000329516 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
RGPD6-201ENST00000329516 BLMP54132 1417 aaPredicted RBP4.19□□□□□ -1.74
RGPD6-201ENST00000329516 FER1L4A9Z1Z3 1794 aa4.19□□□□□ -1.74
RGPD6-201ENST00000329516 SKAP1Q86WV1 359 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 GLI2P10070 1586 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 SLIT2O94813 1529 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 MIA2Q96PC5 1412 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 COL9A3Q14050 684 aaPredicted RBP4.18□□□□□ -1.74
RGPD6-201ENST00000329516 INSRP06213 1382 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 TRAPPC8Q9Y2L5 1435 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 DIP2AQ14689 1571 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 KIF27Q86VH2 1401 aa4.18□□□□□ -1.74
RGPD6-201ENST00000329516 ARHGAP31Q2M1Z3 1444 aa4.17□□□□□ -1.74
RGPD6-201ENST00000329516 PARD3Q8TEW0 1356 aa4.16□□□□□ -1.74
RGPD6-201ENST00000329516 NOS1P29475 1434 aa4.16□□□□□ -1.74
RGPD6-201ENST00000329516 DDIT3P35638 169 aa4.16□□□□□ -1.74
RGPD6-201ENST00000329516 NCAPD2Q15021 1401 aa4.16□□□□□ -1.74
RGPD6-201ENST00000329516 KIAA1107Q9UPP5 1409 aa4.15□□□□□ -1.74
RGPD6-201ENST00000329516 CHD4Q14839 1912 aa4.15□□□□□ -1.74
RGPD6-201ENST00000329516 LRRC7Q96NW7 1537 aa4.15□□□□□ -1.74
RGPD6-201ENST00000329516 UBR1Q8IWV7 1749 aa4.15□□□□□ -1.75
RGPD6-201ENST00000329516 SETBP1Q9Y6X0 1596 aa4.15□□□□□ -1.75
RGPD6-201ENST00000329516 DIP2BQ9P265 1576 aa4.14□□□□□ -1.75
RGPD6-201ENST00000329516 CCDC144AA2RUR9 1427 aa4.14□□□□□ -1.75
RGPD6-201ENST00000329516 PLEKHH1Q9ULM0 1364 aa4.14□□□□□ -1.75
RGPD6-201ENST00000329516 SUPT16HQ9Y5B9 1047 aaKnown RBP4.14□□□□□ -1.75
RGPD6-201ENST00000329516 NWD2Q9ULI1 1742 aa4.14□□□□□ -1.75
RGPD6-201ENST00000329516 FANCAO15360 1455 aa4.13□□□□□ -1.75
RGPD6-201ENST00000329516 ARHGEF40Q8TER5 1519 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 CCDC141Q6ZP82 1450 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 DISP3Q9P2K9 1392 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 PLCH1Q4KWH8 1693 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 ZNF692Q9BU19 519 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms