RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
SNRNP200-201ENST00000323853 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
SNRNP200-201ENST00000323853 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
SNRNP200-201ENST00000323853 H3BQV1 296 aa13.43□□□□□ -0.26
SNRNP200-201ENST00000323853 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
SNRNP200-201ENST00000323853 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■■■■ 27.4
SNRNP200-201ENST00000323853 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
SNRNP200-201ENST00000323853 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
SNRNP200-201ENST00000323853 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
SNRNP200-201ENST00000323853 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
SNRNP200-201ENST00000323853 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
SNRNP200-201ENST00000323853 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
SNRNP200-201ENST00000323853 REC8O95072 547 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 CFTRP13569 1480 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
SNRNP200-201ENST00000323853 AAMPQ13685 434 aa13.39□□□□□ -0.27
SNRNP200-201ENST00000323853 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
SNRNP200-201ENST00000323853 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
SNRNP200-201ENST00000323853 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
SNRNP200-201ENST00000323853 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
SNRNP200-201ENST00000323853 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-201ENST00000323853 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
SNRNP200-201ENST00000323853 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
SNRNP200-201ENST00000323853 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-201ENST00000323853 GNAI1P63096 354 aa13.38□□□□□ -0.27
SNRNP200-201ENST00000323853 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.274e-6■■□□□ 13.4
SNRNP200-201ENST00000323853 TEFQ10587 303 aa13.37□□□□□ -0.27
SNRNP200-201ENST00000323853 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
SNRNP200-201ENST00000323853 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 PANK1Q8TE04 598 aa13.36□□□□□ -0.27
SNRNP200-201ENST00000323853 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 TTC5Q8N0Z6 440 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 GOLGA6L1Q8N7Z2 621 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
SNRNP200-201ENST00000323853 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
SNRNP200-201ENST00000323853 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
SNRNP200-201ENST00000323853 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
SNRNP200-201ENST00000323853 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
SNRNP200-201ENST00000323853 PRXQ9BXM0 1461 aa13.34□□□□□ -0.27
SNRNP200-201ENST00000323853 FRAT2O75474 233 aaPredicted RBP13.33□□□□□ -0.27
SNRNP200-201ENST00000323853 PPP2R1AP30153 589 aa13.33□□□□□ -0.27
SNRNP200-201ENST00000323853 ZKSCAN1P17029 563 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-201ENST00000323853 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
SNRNP200-201ENST00000323853 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
SNRNP200-201ENST00000323853 HMOX1P09601 288 aa13.33□□□□□ -0.28
SNRNP200-201ENST00000323853 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-201ENST00000323853 TPM3P06753 285 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 G3V3G9 751 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 C9orf84Q5VXU9 1444 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 HFM1A2PYH4 1435 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 HSP90AA2PQ14568 343 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
SNRNP200-201ENST00000323853 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
SNRNP200-201ENST00000323853 CDC45O75419 566 aa13.31□□□□□ -0.28
SNRNP200-201ENST00000323853 BECN2A8MW95 431 aa13.31□□□□□ -0.28
SNRNP200-201ENST00000323853 SYNE3Q6ZMZ3 975 aa13.31□□□□□ -0.28
SNRNP200-201ENST00000323853 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 DAPK1P53355 1430 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 NUCB2P80303 420 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.287e-8■■■□□ 14.6
SNRNP200-201ENST00000323853 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 EVA1CP58658 441 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
SNRNP200-201ENST00000323853 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
SNRNP200-201ENST00000323853 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
SNRNP200-201ENST00000323853 MARCH6O60337 910 aa13.29□□□□□ -0.28
SNRNP200-201ENST00000323853 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
SNRNP200-201ENST00000323853 PSME1Q06323 249 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 TRIM29Q14134 588 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 ERC2O15083 957 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 TPM2P07951 284 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
SNRNP200-201ENST00000323853 AKNAQ7Z591 1439 aa13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 ERBINQ96RT1 1412 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms