RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
HCCS-201ENST00000321143 UGGT1Q9NYU2 1555 aa25.61■■□□□ 1.69
HCCS-201ENST00000321143 EFCAB6Q5THR3 1501 aa25.59■■□□□ 1.69
HCCS-201ENST00000321143 MLECQ14165 292 aa25.59■■□□□ 1.69
HCCS-201ENST00000321143 PARD3Q8TEW0 1356 aa25.59■■□□□ 1.69
HCCS-201ENST00000321143 DISP3Q9P2K9 1392 aa25.58■■□□□ 1.69
HCCS-201ENST00000321143 ABCC3O15438 1527 aa25.58■■□□□ 1.69
HCCS-201ENST00000321143 PTPRTO14522 1441 aa25.58■■□□□ 1.69
HCCS-201ENST00000321143 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
HCCS-201ENST00000321143 NPATQ14207 1427 aa25.57■■□□□ 1.68
HCCS-201ENST00000321143 CLTCL1P53675 1640 aa25.57■■□□□ 1.68
HCCS-201ENST00000321143 NLRP13Q86W25 1043 aa25.56■■□□□ 1.68
HCCS-201ENST00000321143 LMTK2Q8IWU2 1503 aa25.56■■□□□ 1.68
HCCS-201ENST00000321143 TRPM2O94759 1503 aa25.55■■□□□ 1.68
HCCS-201ENST00000321143 B4GALNT3Q6L9W6 998 aa25.54■■□□□ 1.68
HCCS-201ENST00000321143 RNF123Q5XPI4 1314 aa25.54■■□□□ 1.68
HCCS-201ENST00000321143 TMF1P82094 1093 aa25.54■■□□□ 1.68
HCCS-201ENST00000321143 SENP3-EIF4A1A0A087X0R7 540 aa25.53■■□□□ 1.68
HCCS-201ENST00000321143 ARHGEF40Q8TER5 1519 aa25.52■■□□□ 1.68
HCCS-201ENST00000321143 CAMSAP1Q5T5Y3 1602 aa25.51■■□□□ 1.67
HCCS-201ENST00000321143 MADDQ8WXG6 1647 aa25.5■■□□□ 1.67
HCCS-201ENST00000321143 PANK3Q9H999 370 aa25.49■■□□□ 1.67
HCCS-201ENST00000321143 ANP32EQ9BTT0 268 aa25.48■■□□□ 1.67
HCCS-201ENST00000321143 STAC3Q96MF2 364 aa25.46■■□□□ 1.67
HCCS-201ENST00000321143 REREQ9P2R6 1566 aa25.46■■□□□ 1.67
HCCS-201ENST00000321143 CC2D1BQ5T0F9 858 aaKnown RBP25.45■■□□□ 1.66
HCCS-201ENST00000321143 FBXO31Q5XUX0 539 aaPredicted RBP25.45■■□□□ 1.66
HCCS-201ENST00000321143 AGLP35573 1532 aa25.43■■□□□ 1.66
HCCS-201ENST00000321143 IQGAP1P46940 1657 aa25.43■■□□□ 1.66
HCCS-201ENST00000321143 CHGAP10645 457 aaKnown RBP25.41■■□□□ 1.66
HCCS-201ENST00000321143 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
HCCS-201ENST00000321143 MROH2AA6NES4 1674 aa25.4■■□□□ 1.66
HCCS-201ENST00000321143 SYNMO15061 1565 aa25.39■■□□□ 1.65
HCCS-201ENST00000321143 SCAF11Q99590 1463 aaKnown RBP25.39■■□□□ 1.65
HCCS-201ENST00000321143 KIF1BO60333 1816 aa25.38■■□□□ 1.65
HCCS-201ENST00000321143 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
HCCS-201ENST00000321143 NOS1P29475 1434 aa25.37■■□□□ 1.65
HCCS-201ENST00000321143 FANCIQ9NVI1 1328 aa25.37■■□□□ 1.65
HCCS-201ENST00000321143 INSRP06213 1382 aa25.36■■□□□ 1.65
HCCS-201ENST00000321143 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
HCCS-201ENST00000321143 ARHGAP31Q2M1Z3 1444 aa25.34■■□□□ 1.65
HCCS-201ENST00000321143 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
HCCS-201ENST00000321143 NEURL4Q96JN8 1562 aa25.34■■□□□ 1.65
HCCS-201ENST00000321143 IDI1Q13907 227 aa25.34■■□□□ 1.65
HCCS-201ENST00000321143 CDCA8Q53HL2 280 aa25.34■■□□□ 1.65
HCCS-201ENST00000321143 PREX1Q8TCU6 1659 aa25.33■■□□□ 1.65
HCCS-201ENST00000321143 CCDC136Q96JN2 1154 aa25.33■■□□□ 1.64
HCCS-201ENST00000321143 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
HCCS-201ENST00000321143 NUTM2DQ5VT03 806 aaPredicted RBP25.31■■□□□ 1.64
HCCS-201ENST00000321143 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
HCCS-201ENST00000321143 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
HCCS-201ENST00000321143 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
HCCS-201ENST00000321143 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
HCCS-201ENST00000321143 RRP1P56182 461 aaKnown RBP25.29■■□□□ 1.64
HCCS-201ENST00000321143 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
HCCS-201ENST00000321143 RCAN3Q9UKA8 241 aa25.28■■□□□ 1.64
HCCS-201ENST00000321143 MYO5BQ9ULV0 1848 aa25.28■■□□□ 1.64
HCCS-201ENST00000321143 MSH5O43196 834 aa25.28■■□□□ 1.64
HCCS-201ENST00000321143 PIK3C2BO00750 1634 aa25.28■■□□□ 1.64
HCCS-201ENST00000321143 ADGRB3O60242 1522 aa25.27■■□□□ 1.64
HCCS-201ENST00000321143 MYOM2P54296 1465 aa25.25■■□□□ 1.63
HCCS-201ENST00000321143 PPP6R1Q9UPN7 881 aa25.25■■□□□ 1.63
HCCS-201ENST00000321143 ZMYM3Q14202 1370 aa25.25■■□□□ 1.63
HCCS-201ENST00000321143 AMER1Q5JTC6 1135 aaPredicted RBP25.24■■□□□ 1.63
HCCS-201ENST00000321143 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
HCCS-201ENST00000321143 IFT172Q9UG01 1749 aa25.24■■□□□ 1.63
HCCS-201ENST00000321143 PLPPR3Q6T4P5 718 aa25.23■■□□□ 1.63
HCCS-201ENST00000321143 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
HCCS-201ENST00000321143 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
HCCS-201ENST00000321143 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
HCCS-201ENST00000321143 CEBPAP49715 358 aaPredicted RBP25.22■■□□□ 1.63
HCCS-201ENST00000321143 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
HCCS-201ENST00000321143 ASXL1Q8IXJ9 1541 aa25.2■■□□□ 1.62
HCCS-201ENST00000321143 MYOM1P52179 1685 aa25.2■■□□□ 1.62
HCCS-201ENST00000321143 PPLO60437 1756 aa25.18■■□□□ 1.62
HCCS-201ENST00000321143 SLC24A1O60721 1099 aa25.18■■□□□ 1.62
HCCS-201ENST00000321143 SLC52A1Q9NWF4 448 aa25.18■■□□□ 1.62
HCCS-201ENST00000321143 ADAMTS8Q9UP79 889 aa25.18■■□□□ 1.62
HCCS-201ENST00000321143 KDM5AP29375 1690 aaKnown RBP25.18■■□□□ 1.62
HCCS-201ENST00000321143 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
HCCS-201ENST00000321143 EXOC6Q8TAG9 804 aa25.16■■□□□ 1.62
HCCS-201ENST00000321143 TMEM131LA2VDJ0 1609 aa25.15■■□□□ 1.62
HCCS-201ENST00000321143 WDR43Q15061 677 aaKnown RBP eCLIP25.15■■□□□ 1.62
HCCS-201ENST00000321143 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.61
HCCS-201ENST00000321143 NRXN1Q9ULB1 1477 aa25.14■■□□□ 1.61
HCCS-201ENST00000321143 PIK3C2GO75747 1445 aa25.13■■□□□ 1.61
HCCS-201ENST00000321143 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
HCCS-201ENST00000321143 STAG3Q9UJ98 1225 aa25.09■■□□□ 1.61
HCCS-201ENST00000321143 TMEM132EQ6IEE7 984 aa25.08■■□□□ 1.61
HCCS-201ENST00000321143 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
HCCS-201ENST00000321143 MYO3AQ8NEV4 1616 aa25.06■■□□□ 1.6
HCCS-201ENST00000321143 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
HCCS-201ENST00000321143 RPGRIP1LQ68CZ1 1315 aa25.06■■□□□ 1.6
HCCS-201ENST00000321143 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
HCCS-201ENST00000321143 SETBP1Q9Y6X0 1596 aa25.05■■□□□ 1.6
HCCS-201ENST00000321143 PLEKHH1Q9ULM0 1364 aa25.04■■□□□ 1.6
HCCS-201ENST00000321143 C3P01024 1663 aa25.04■■□□□ 1.6
HCCS-201ENST00000321143 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
HCCS-201ENST00000321143 TNRQ92752 1358 aa25.02■■□□□ 1.6
HCCS-201ENST00000321143 PLIN1O60240 522 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms