RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 SLKQ9H2G2 1235 aaPredicted RBP9.28□□□□□ -0.92
CCDC93-201ENST00000319432 NLRP2Q9NX02 1062 aa9.28□□□□□ -0.92
CCDC93-201ENST00000319432 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
CCDC93-201ENST00000319432 FRAT1Q92837 279 aaPredicted RBP9.27□□□□□ -0.93
CCDC93-201ENST00000319432 PRDM11Q9NQV5 511 aa9.27□□□□□ -0.93
CCDC93-201ENST00000319432 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
CCDC93-201ENST00000319432 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
CCDC93-201ENST00000319432 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
CCDC93-201ENST00000319432 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
CCDC93-201ENST00000319432 PRKCSHP14314 528 aaPredicted RBP9.26□□□□□ -0.93
CCDC93-201ENST00000319432 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
CCDC93-201ENST00000319432 TNRQ92752 1358 aa9.26□□□□□ -0.93
CCDC93-201ENST00000319432 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
CCDC93-201ENST00000319432 ZMYM3Q14202 1370 aa9.25□□□□□ -0.93
CCDC93-201ENST00000319432 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
CCDC93-201ENST00000319432 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
CCDC93-201ENST00000319432 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
CCDC93-201ENST00000319432 KAT6BQ8WYB5 2073 aa9.25□□□□□ -0.93
CCDC93-201ENST00000319432 U2AF1L5P0DN76 240 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-201ENST00000319432 U2AF1Q01081 240 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC93-201ENST00000319432 CENPJQ9HC77 1338 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-201ENST00000319432 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
CCDC93-201ENST00000319432 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
CCDC93-201ENST00000319432 LMTK3Q96Q04 1460 aa9.24□□□□□ -0.93
CCDC93-201ENST00000319432 COG3Q96JB2 828 aa9.23□□□□□ -0.93
CCDC93-201ENST00000319432 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
CCDC93-201ENST00000319432 GGNBP2Q9H3C7 697 aa9.23□□□□□ -0.93
CCDC93-201ENST00000319432 GPATCH8Q9UKJ3 1502 aaKnown RBP9.23□□□□□ -0.93
CCDC93-201ENST00000319432 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 GPRASP1Q5JY77 1395 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
CCDC93-201ENST00000319432 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-201ENST00000319432 NAP1L2Q9ULW6 460 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-201ENST00000319432 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
CCDC93-201ENST00000319432 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
CCDC93-201ENST00000319432 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
CCDC93-201ENST00000319432 DAPK1P53355 1430 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 KCNA6P17658 529 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 C8orf37Q96NL8 207 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 A2MP01023 1474 aa9.2□□□□□ -0.94
CCDC93-201ENST00000319432 PCF11O94913 1555 aaKnown RBP9.19□□□□□ -0.94
CCDC93-201ENST00000319432 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 PKNOX2Q96KN3 472 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
CCDC93-201ENST00000319432 CDK19Q9BWU1 502 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 CHD1O14646 1710 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 ABCC5O15440 1437 aa9.19□□□□□ -0.94
CCDC93-201ENST00000319432 KIAA0556O60303 1618 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 CAMSAP2Q08AD1 1489 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CCDC93-201ENST00000319432 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 EIF3AQ14152 1382 aaKnown RBP9.18□□□□□ -0.94
CCDC93-201ENST00000319432 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
CCDC93-201ENST00000319432 PANK3Q9H999 370 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 KIF14Q15058 1648 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
CCDC93-201ENST00000319432 IPO9Q96P70 1041 aaKnown RBP9.17□□□□□ -0.94
CCDC93-201ENST00000319432 ABCA5Q8WWZ7 1642 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 UHRF1BP1Q6BDS2 1440 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 NCOA1Q15788 1441 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 CABLES1Q8TDN4 633 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 PODXL2Q9NZ53 605 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
CCDC93-201ENST00000319432 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-201ENST00000319432 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
CCDC93-201ENST00000319432 RAPGEF6Q8TEU7 1601 aa9.16□□□□□ -0.94
CCDC93-201ENST00000319432 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
CCDC93-201ENST00000319432 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
CCDC93-201ENST00000319432 PTMSP20962 102 aa9.15□□□□□ -0.94
CCDC93-201ENST00000319432 MSH6P52701 1360 aa9.15□□□□□ -0.94
CCDC93-201ENST00000319432 UHRF1BP1LA0JNW5 1464 aa9.15□□□□□ -0.94
CCDC93-201ENST00000319432 ABCC10Q5T3U5 1492 aa9.15□□□□□ -0.94
CCDC93-201ENST00000319432 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
CCDC93-201ENST00000319432 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.94
CCDC93-201ENST00000319432 ZNF335Q9H4Z2 1342 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-201ENST00000319432 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-201ENST00000319432 ZNF771Q7L3S4 317 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-201ENST00000319432 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-201ENST00000319432 DDX17Q92841 729 aaKnown RBP9.14□□□□□ -0.95
CCDC93-201ENST00000319432 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 TIAM1Q13009 1591 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 FAM135AQ9P2D6 1515 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 LTKP29376 864 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
CCDC93-201ENST00000319432 KRT28Q7Z3Y7 464 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms