RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
CCDC93-201ENST00000319432 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
CCDC93-201ENST00000319432 SHROOM4Q9ULL8 1493 aa12.48□□□□□ -0.41
CCDC93-201ENST00000319432 ABCC9O60706 1549 aa12.33□□□□□ -0.44
CCDC93-201ENST00000319432 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
CCDC93-201ENST00000319432 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.475e-8■■■□□ 15.8
CCDC93-201ENST00000319432 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
CCDC93-201ENST00000319432 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
CCDC93-201ENST00000319432 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
CCDC93-201ENST00000319432 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
CCDC93-201ENST00000319432 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
CCDC93-201ENST00000319432 ERICH6Q7L0X2 663 aa11.39□□□□□ -0.59
CCDC93-201ENST00000319432 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
CCDC93-201ENST00000319432 MYT1Q01538 1121 aa11.34□□□□□ -0.59
CCDC93-201ENST00000319432 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
CCDC93-201ENST00000319432 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
CCDC93-201ENST00000319432 FBLN2P98095 1184 aa11.32□□□□□ -0.6
CCDC93-201ENST00000319432 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
CCDC93-201ENST00000319432 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
CCDC93-201ENST00000319432 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.62
CCDC93-201ENST00000319432 CCDC180Q9P1Z9 1646 aa11.19□□□□□ -0.62
CCDC93-201ENST00000319432 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
CCDC93-201ENST00000319432 CENPBP07199 599 aaPredicted RBP11.16□□□□□ -0.62
CCDC93-201ENST00000319432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
CCDC93-201ENST00000319432 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
CCDC93-201ENST00000319432 APLP2Q06481 763 aa11.15□□□□□ -0.62
CCDC93-201ENST00000319432 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
CCDC93-201ENST00000319432 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
CCDC93-201ENST00000319432 CCER1Q8TC90 406 aaPredicted RBP11.03□□□□□ -0.64
CCDC93-201ENST00000319432 NACADO15069 1562 aa11.02□□□□□ -0.65
CCDC93-201ENST00000319432 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
CCDC93-201ENST00000319432 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
CCDC93-201ENST00000319432 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
CCDC93-201ENST00000319432 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
CCDC93-201ENST00000319432 CHIC1Q5VXU3 224 aa10.88□□□□□ -0.67
CCDC93-201ENST00000319432 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
CCDC93-201ENST00000319432 NEFLP07196 543 aa10.85□□□□□ -0.67
CCDC93-201ENST00000319432 CECR2Q9BXF3 1484 aa10.84□□□□□ -0.67
CCDC93-201ENST00000319432 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
CCDC93-201ENST00000319432 LOC105371045A0A1W2PR82 267 aa10.81□□□□□ -0.68
CCDC93-201ENST00000319432 ZEB1P37275 1124 aaPredicted RBP10.81□□□□□ -0.68
CCDC93-201ENST00000319432 ITGAEP38570 1179 aa10.78□□□□□ -0.68
CCDC93-201ENST00000319432 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.68
CCDC93-201ENST00000319432 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC93-201ENST00000319432 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
CCDC93-201ENST00000319432 PLPPR3Q6T4P5 718 aa10.76□□□□□ -0.69
CCDC93-201ENST00000319432 HRCP23327 699 aa10.7□□□□□ -0.7
CCDC93-201ENST00000319432 RSF1Q96T23 1441 aaPredicted RBP10.68□□□□□ -0.7
CCDC93-201ENST00000319432 DAXXQ9UER7 740 aaPredicted RBP10.64□□□□□ -0.71
CCDC93-201ENST00000319432 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
CCDC93-201ENST00000319432 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
CCDC93-201ENST00000319432 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
CCDC93-201ENST00000319432 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
CCDC93-201ENST00000319432 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
CCDC93-201ENST00000319432 BCANQ96GW7 911 aa10.57□□□□□ -0.72
CCDC93-201ENST00000319432 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
CCDC93-201ENST00000319432 CYB5RLQ6IPT4 315 aa10.57□□□□□ -0.72
CCDC93-201ENST00000319432 GTF3C3Q9Y5Q9 886 aa10.56□□□□□ -0.72
CCDC93-201ENST00000319432 PDS5BQ9NTI5 1447 aa10.56□□□□□ -0.72
CCDC93-201ENST00000319432 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
CCDC93-201ENST00000319432 TDRD9Q8NDG6 1382 aaKnown RBP10.55□□□□□ -0.72
CCDC93-201ENST00000319432 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
CCDC93-201ENST00000319432 FAM50AQ14320 339 aaKnown RBP10.52□□□□□ -0.73
CCDC93-201ENST00000319432 ATAD2BQ9ULI0 1458 aa10.51□□□□□ -0.73
CCDC93-201ENST00000319432 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
CCDC93-201ENST00000319432 TRIM26Q12899 539 aaPredicted RBP10.49□□□□□ -0.73
CCDC93-201ENST00000319432 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
CCDC93-201ENST00000319432 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
CCDC93-201ENST00000319432 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
CCDC93-201ENST00000319432 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
CCDC93-201ENST00000319432 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
CCDC93-201ENST00000319432 CDK11AQ9UQ88 783 aaPredicted RBP10.45□□□□□ -0.74
CCDC93-201ENST00000319432 ZNF316A6NFI3 1004 aaPredicted RBP10.44□□□□□ -0.74
CCDC93-201ENST00000319432 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
CCDC93-201ENST00000319432 DIEXFQ68CQ4 756 aaKnown RBP10.44□□□□□ -0.74
CCDC93-201ENST00000319432 EIF5BO60841 1220 aaKnown RBP10.43□□□□□ -0.74
CCDC93-201ENST00000319432 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
CCDC93-201ENST00000319432 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-201ENST00000319432 NESP48681 1621 aa10.39□□□□□ -0.75
CCDC93-201ENST00000319432 CCDC88BA6NC98 1476 aa10.38□□□□□ -0.75
CCDC93-201ENST00000319432 SOGA1O94964 1423 aa10.38□□□□□ -0.75
CCDC93-201ENST00000319432 TRIM52Q96A61 297 aa10.38□□□□□ -0.75
CCDC93-201ENST00000319432 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
CCDC93-201ENST00000319432 SENP3Q9H4L4 574 aaPredicted RBP10.38□□□□□ -0.75
CCDC93-201ENST00000319432 CUX2O14529 1486 aa10.35□□□□□ -0.75
CCDC93-201ENST00000319432 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
CCDC93-201ENST00000319432 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
CCDC93-201ENST00000319432 FANCD2Q9BXW9 1451 aa10.33□□□□□ -0.76
CCDC93-201ENST00000319432 MLECQ14165 292 aa10.33□□□□□ -0.76
CCDC93-201ENST00000319432 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
CCDC93-201ENST00000319432 WIZO95785 1651 aa10.32□□□□□ -0.76
CCDC93-201ENST00000319432 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
CCDC93-201ENST00000319432 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
CCDC93-201ENST00000319432 KIF27Q86VH2 1401 aa10.31□□□□□ -0.76
CCDC93-201ENST00000319432 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
CCDC93-201ENST00000319432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.768e-7■■■□□ 15.1
CCDC93-201ENST00000319432 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
CCDC93-201ENST00000319432 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
CCDC93-201ENST00000319432 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
CCDC93-201ENST00000319432 SMARCA4P51532 1647 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms