RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 PER1O15534 1290 aaPredicted RBP21.58■■□□□ 1.04
SHISA2-201ENST00000319420 KTN1Q86UP2 1357 aaKnown RBP21.57■■□□□ 1.04
SHISA2-201ENST00000319420 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
SHISA2-201ENST00000319420 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
SHISA2-201ENST00000319420 MYBBP1AQ9BQG0 1328 aaKnown RBP21.56■■□□□ 1.04
SHISA2-201ENST00000319420 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
SHISA2-201ENST00000319420 MADDQ8WXG6 1647 aa21.56■■□□□ 1.04
SHISA2-201ENST00000319420 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
SHISA2-201ENST00000319420 STK26Q9P289 416 aa21.54■■□□□ 1.04
SHISA2-201ENST00000319420 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
SHISA2-201ENST00000319420 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
SHISA2-201ENST00000319420 KNSTRNQ9Y448 316 aa21.54■■□□□ 1.04
SHISA2-201ENST00000319420 RALBP1Q15311 655 aa21.54■■□□□ 1.04
SHISA2-201ENST00000319420 SCAF11Q99590 1463 aaKnown RBP21.52■■□□□ 1.04
SHISA2-201ENST00000319420 DIP2CQ9Y2E4 1556 aa21.52■■□□□ 1.04
SHISA2-201ENST00000319420 ABCC3O15438 1527 aa21.52■■□□□ 1.03
SHISA2-201ENST00000319420 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
SHISA2-201ENST00000319420 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
SHISA2-201ENST00000319420 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
SHISA2-201ENST00000319420 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
SHISA2-201ENST00000319420 MAP3K4Q9Y6R4 1608 aa21.49■■□□□ 1.03
SHISA2-201ENST00000319420 MROH2AA6NES4 1674 aa21.48■■□□□ 1.03
SHISA2-201ENST00000319420 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
SHISA2-201ENST00000319420 KIF1BO60333 1816 aa21.46■■□□□ 1.03
SHISA2-201ENST00000319420 CDCA8Q53HL2 280 aa21.46■■□□□ 1.03
SHISA2-201ENST00000319420 DIP2BQ9P265 1576 aa21.45■■□□□ 1.03
SHISA2-201ENST00000319420 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
SHISA2-201ENST00000319420 RICTORQ6R327 1708 aa21.45■■□□□ 1.02
SHISA2-201ENST00000319420 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
SHISA2-201ENST00000319420 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
SHISA2-201ENST00000319420 VGFO15240 615 aaPredicted RBP21.42■■□□□ 1.02
SHISA2-201ENST00000319420 C14orf93Q9H972 538 aaKnown RBP21.42■■□□□ 1.02
SHISA2-201ENST00000319420 PARD3Q8TEW0 1356 aa21.42■■□□□ 1.02
SHISA2-201ENST00000319420 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
SHISA2-201ENST00000319420 LAMC1P11047 1609 aa21.41■■□□□ 1.02
SHISA2-201ENST00000319420 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
SHISA2-201ENST00000319420 SLC12A5Q9H2X9 1139 aa21.41■■□□□ 1.02
SHISA2-201ENST00000319420 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.01
SHISA2-201ENST00000319420 ADGRB3O60242 1522 aa21.39■■□□□ 1.01
SHISA2-201ENST00000319420 CAMSAP1Q5T5Y3 1602 aa21.38■■□□□ 1.01
SHISA2-201ENST00000319420 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
SHISA2-201ENST00000319420 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
SHISA2-201ENST00000319420 MYOM2P54296 1465 aa21.38■■□□□ 1.01
SHISA2-201ENST00000319420 GLI2P10070 1586 aa21.36■■□□□ 1.01
SHISA2-201ENST00000319420 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
SHISA2-201ENST00000319420 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
SHISA2-201ENST00000319420 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
SHISA2-201ENST00000319420 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
SHISA2-201ENST00000319420 SYNMO15061 1565 aa21.35■■□□□ 1.01
SHISA2-201ENST00000319420 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
SHISA2-201ENST00000319420 PIK3C2GO75747 1445 aa21.35■■□□□ 1.01
SHISA2-201ENST00000319420 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
SHISA2-201ENST00000319420 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1.01
SHISA2-201ENST00000319420 ERVK-7P63135 1459 aa21.33■■□□□ 1
SHISA2-201ENST00000319420 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
SHISA2-201ENST00000319420 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
SHISA2-201ENST00000319420 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
SHISA2-201ENST00000319420 WDR43Q15061 677 aaKnown RBP eCLIP21.31■■□□□ 1
SHISA2-201ENST00000319420 NUDCQ9Y266 331 aa21.31■■□□□ 1
SHISA2-201ENST00000319420 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
SHISA2-201ENST00000319420 POGKQ9P215 609 aa21.3■■□□□ 1
SHISA2-201ENST00000319420 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
SHISA2-201ENST00000319420 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
SHISA2-201ENST00000319420 PRAM1Q96QH2 718 aa21.28■■□□□ 1
SHISA2-201ENST00000319420 SMG6Q86US8 1419 aaKnown RBP21.27■■□□□ 1
SHISA2-201ENST00000319420 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
SHISA2-201ENST00000319420 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
SHISA2-201ENST00000319420 ARHGAP31Q2M1Z3 1444 aa21.26■□□□□ 0.99
SHISA2-201ENST00000319420 IFT172Q9UG01 1749 aa21.24■□□□□ 0.99
SHISA2-201ENST00000319420 PPLO60437 1756 aa21.24■□□□□ 0.99
SHISA2-201ENST00000319420 WAPLQ7Z5K2 1190 aa21.23■□□□□ 0.99
SHISA2-201ENST00000319420 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
SHISA2-201ENST00000319420 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
SHISA2-201ENST00000319420 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
SHISA2-201ENST00000319420 NSD3Q9BZ95 1437 aa21.22■□□□□ 0.99
SHISA2-201ENST00000319420 ZMYM4Q5VZL5 1548 aa21.22■□□□□ 0.99
SHISA2-201ENST00000319420 PIK3C2BO00750 1634 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 ADGRB1O14514 1584 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 NEURL4Q96JN8 1562 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
SHISA2-201ENST00000319420 MYO5BQ9ULV0 1848 aa21.2■□□□□ 0.98
SHISA2-201ENST00000319420 KIAA1210Q9ULL0 1709 aa21.2■□□□□ 0.98
SHISA2-201ENST00000319420 KDM5AP29375 1690 aaKnown RBP21.2■□□□□ 0.98
SHISA2-201ENST00000319420 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
SHISA2-201ENST00000319420 PREX1Q8TCU6 1659 aa21.18■□□□□ 0.98
SHISA2-201ENST00000319420 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
SHISA2-201ENST00000319420 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
SHISA2-201ENST00000319420 KIF13AQ9H1H9 1805 aa21.16■□□□□ 0.98
SHISA2-201ENST00000319420 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
SHISA2-201ENST00000319420 MYOM1P52179 1685 aa21.16■□□□□ 0.98
SHISA2-201ENST00000319420 PLIN1O60240 522 aa21.14■□□□□ 0.97
SHISA2-201ENST00000319420 TXNDC2Q86VQ3 553 aa21.14■□□□□ 0.97
SHISA2-201ENST00000319420 GGNBP2Q9H3C7 697 aa21.14■□□□□ 0.97
SHISA2-201ENST00000319420 APAF1O14727 1248 aa21.14■□□□□ 0.97
SHISA2-201ENST00000319420 ZC3H13Q5T200 1668 aaKnown RBP21.13■□□□□ 0.97
SHISA2-201ENST00000319420 RBM19Q9Y4C8 960 aaKnown RBP21.13■□□□□ 0.97
SHISA2-201ENST00000319420 SBNO2Q9Y2G9 1366 aa21.13■□□□□ 0.97
SHISA2-201ENST00000319420 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms