RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MAST1Q9Y2H9 1570 aa23.38■■□□□ 1.33
SPSB4-201ENST00000310546 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
SPSB4-201ENST00000310546 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
SPSB4-201ENST00000310546 GLI2P10070 1586 aa23.37■■□□□ 1.33
SPSB4-201ENST00000310546 FAM69CQ0P6D2 419 aa23.37■■□□□ 1.33
SPSB4-201ENST00000310546 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
SPSB4-201ENST00000310546 L1TD1Q5T7N2 865 aaKnown RBP23.36■■□□□ 1.33
SPSB4-201ENST00000310546 ST20-MTHFSA0A0A6YYL1 179 aa23.36■■□□□ 1.33
SPSB4-201ENST00000310546 MAP3K4Q9Y6R4 1608 aa23.35■■□□□ 1.33
SPSB4-201ENST00000310546 RAPGEF3O95398 923 aa23.33■■□□□ 1.33
SPSB4-201ENST00000310546 HSP90AA1P07900 732 aaKnown RBP23.33■■□□□ 1.33
SPSB4-201ENST00000310546 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
SPSB4-201ENST00000310546 ABCC1P33527 1531 aa23.33■■□□□ 1.33
SPSB4-201ENST00000310546 CD109Q6YHK3 1445 aa23.33■■□□□ 1.33
SPSB4-201ENST00000310546 FAM135AQ9P2D6 1515 aa23.33■■□□□ 1.32
SPSB4-201ENST00000310546 SCAPERQ9BY12 1400 aa23.32■■□□□ 1.32
SPSB4-201ENST00000310546 PLXNC1O60486 1568 aa23.31■■□□□ 1.32
SPSB4-201ENST00000310546 KIF3BO15066 747 aa23.3■■□□□ 1.32
SPSB4-201ENST00000310546 FANCAO15360 1455 aa23.28■■□□□ 1.32
SPSB4-201ENST00000310546 KDM5CP41229 1560 aa23.28■■□□□ 1.32
SPSB4-201ENST00000310546 TSPOAP1O95153 1857 aa23.27■■□□□ 1.32
SPSB4-201ENST00000310546 ARAP3Q8WWN8 1544 aa23.27■■□□□ 1.32
SPSB4-201ENST00000310546 RRP9O43818 475 aaKnown RBP23.26■■□□□ 1.31
SPSB4-201ENST00000310546 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
SPSB4-201ENST00000310546 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPSB4-201ENST00000310546 DUOX2Q9NRD8 1548 aa23.25■■□□□ 1.31
SPSB4-201ENST00000310546 GZF1Q9H116 711 aaPredicted RBP23.25■■□□□ 1.31
SPSB4-201ENST00000310546 UNC13BO14795 1591 aa23.25■■□□□ 1.31
SPSB4-201ENST00000310546 PANK2Q9BZ23 570 aa23.25■■□□□ 1.31
SPSB4-201ENST00000310546 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
SPSB4-201ENST00000310546 BECN1Q14457 450 aa23.23■■□□□ 1.31
SPSB4-201ENST00000310546 GOLGA6L3A6NEY3 463 aa23.22■■□□□ 1.31
SPSB4-201ENST00000310546 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
SPSB4-201ENST00000310546 GGT6Q6P531 493 aa23.22■■□□□ 1.31
SPSB4-201ENST00000310546 CLCN1P35523 988 aa23.22■■□□□ 1.31
SPSB4-201ENST00000310546 SEC24BO95487 1268 aa23.2■■□□□ 1.3
SPSB4-201ENST00000310546 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
SPSB4-201ENST00000310546 ERBINQ96RT1 1412 aa23.2■■□□□ 1.3
SPSB4-201ENST00000310546 USP19O94966 1318 aa23.2■■□□□ 1.3
SPSB4-201ENST00000310546 ADGRL1O94910 1474 aa23.19■■□□□ 1.3
SPSB4-201ENST00000310546 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
SPSB4-201ENST00000310546 ZFYVE16Q7Z3T8 1539 aa23.17■■□□□ 1.3
SPSB4-201ENST00000310546 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.16■■□□□ 1.3
SPSB4-201ENST00000310546 CFAP74Q9C0B2 1584 aa23.16■■□□□ 1.3
SPSB4-201ENST00000310546 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
SPSB4-201ENST00000310546 PLA2R1Q13018 1463 aa23.15■■□□□ 1.3
SPSB4-201ENST00000310546 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
SPSB4-201ENST00000310546 MAGI2Q86UL8 1455 aa23.14■■□□□ 1.29
SPSB4-201ENST00000310546 DUSP27Q5VZP5 1158 aa23.13■■□□□ 1.29
SPSB4-201ENST00000310546 ADAMTS8Q9UP79 889 aa23.13■■□□□ 1.29
SPSB4-201ENST00000310546 RTEL1-TNFRSF6BF6WH68 1400 aa23.13■■□□□ 1.29
SPSB4-201ENST00000310546 NEO1Q92859 1461 aa23.13■■□□□ 1.29
SPSB4-201ENST00000310546 UHRF1BP1Q6BDS2 1440 aa23.12■■□□□ 1.29
SPSB4-201ENST00000310546 ANTXR1Q9H6X2 564 aa23.12■■□□□ 1.29
SPSB4-201ENST00000310546 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
SPSB4-201ENST00000310546 PER1O15534 1290 aaPredicted RBP23.11■■□□□ 1.29
SPSB4-201ENST00000310546 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
SPSB4-201ENST00000310546 BLMP54132 1417 aaPredicted RBP23.11■■□□□ 1.29
SPSB4-201ENST00000310546 NBPF1Q3BBV0 1214 aa23.1■■□□□ 1.29
SPSB4-201ENST00000310546 ATP7AQ04656 1500 aa23.09■■□□□ 1.29
SPSB4-201ENST00000310546 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
SPSB4-201ENST00000310546 IGHDP01880 384 aa23.09■■□□□ 1.29
SPSB4-201ENST00000310546 INO80Q9ULG1 1556 aaPredicted RBP23.07■■□□□ 1.28
SPSB4-201ENST00000310546 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
SPSB4-201ENST00000310546 PLEKHH1Q9ULM0 1364 aa23.05■■□□□ 1.28
SPSB4-201ENST00000310546 ZMYM4Q5VZL5 1548 aa23.05■■□□□ 1.28
SPSB4-201ENST00000310546 MCM4P33991 863 aa23.04■■□□□ 1.28
SPSB4-201ENST00000310546 TBC1D2Q9BYX2 928 aa23.04■■□□□ 1.28
SPSB4-201ENST00000310546 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
SPSB4-201ENST00000310546 PANK3Q9H999 370 aa23.03■■□□□ 1.28
SPSB4-201ENST00000310546 ESPNB1AK53 854 aa23.03■■□□□ 1.28
SPSB4-201ENST00000310546 UPF2Q9HAU5 1272 aaKnown RBP23.03■■□□□ 1.28
SPSB4-201ENST00000310546 BCAR3O75815 825 aa23.02■■□□□ 1.28
SPSB4-201ENST00000310546 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
SPSB4-201ENST00000310546 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.27
SPSB4-201ENST00000310546 POGZQ7Z3K3 1410 aa23.01■■□□□ 1.27
SPSB4-201ENST00000310546 E9PCH4 1651 aa23.01■■□□□ 1.27
SPSB4-201ENST00000310546 TRAK2O60296 914 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 MRE11P49959 708 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 MLECQ14165 292 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 PODXL2Q9NZ53 605 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 ERBB4Q15303 1308 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 A2MP01023 1474 aa23■■□□□ 1.27
SPSB4-201ENST00000310546 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
SPSB4-201ENST00000310546 RICTORQ6R327 1708 aa22.99■■□□□ 1.27
SPSB4-201ENST00000310546 ATP10AO60312 1499 aa22.99■■□□□ 1.27
SPSB4-201ENST00000310546 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
SPSB4-201ENST00000310546 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
SPSB4-201ENST00000310546 KIDINS220Q9ULH0 1771 aa22.98■■□□□ 1.27
SPSB4-201ENST00000310546 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
SPSB4-201ENST00000310546 PRAG1Q86YV5 1406 aa22.98■■□□□ 1.27
SPSB4-201ENST00000310546 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
SPSB4-201ENST00000310546 MAPK8IP3Q9UPT6 1336 aa22.97■■□□□ 1.27
SPSB4-201ENST00000310546 GRPEL1Q9HAV7 217 aa22.96■■□□□ 1.27
SPSB4-201ENST00000310546 INSRP06213 1382 aa22.96■■□□□ 1.27
SPSB4-201ENST00000310546 EIF3AQ14152 1382 aaKnown RBP22.95■■□□□ 1.26
SPSB4-201ENST00000310546 TRPM1Q7Z4N2 1603 aa22.95■■□□□ 1.26
SPSB4-201ENST00000310546 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
SPSB4-201ENST00000310546 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
SPSB4-201ENST00000310546 SLFN5Q08AF3 891 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms