RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 NUTM2DQ5VT03 806 aaPredicted RBP18.76■□□□□ 0.59
APTX-201ENST00000309615 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
APTX-201ENST00000309615 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
APTX-201ENST00000309615 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
APTX-201ENST00000309615 STRCQ7RTU9 1775 aa18.74■□□□□ 0.59
APTX-201ENST00000309615 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
APTX-201ENST00000309615 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
APTX-201ENST00000309615 RPGRIP1LQ68CZ1 1315 aa18.71■□□□□ 0.59
APTX-201ENST00000309615 PPP1R15AO75807 674 aaPredicted RBP18.71■□□□□ 0.59
APTX-201ENST00000309615 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
APTX-201ENST00000309615 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.59
APTX-201ENST00000309615 POLR1AO95602 1720 aaPredicted RBP18.71■□□□□ 0.59
APTX-201ENST00000309615 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
APTX-201ENST00000309615 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
APTX-201ENST00000309615 MED14O60244 1454 aa18.69■□□□□ 0.58
APTX-201ENST00000309615 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
APTX-201ENST00000309615 PPLO60437 1756 aa18.68■□□□□ 0.58
APTX-201ENST00000309615 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
APTX-201ENST00000309615 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
APTX-201ENST00000309615 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
APTX-201ENST00000309615 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
APTX-201ENST00000309615 ADGRF5Q8IZF2 1346 aa18.66■□□□□ 0.58
APTX-201ENST00000309615 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
APTX-201ENST00000309615 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
APTX-201ENST00000309615 BCANQ96GW7 911 aa18.65■□□□□ 0.58
APTX-201ENST00000309615 IQGAP1P46940 1657 aa18.64■□□□□ 0.58
APTX-201ENST00000309615 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
APTX-201ENST00000309615 SLC26A8Q96RN1 970 aa18.63■□□□□ 0.57
APTX-201ENST00000309615 MYOM2P54296 1465 aa18.62■□□□□ 0.57
APTX-201ENST00000309615 TONSLQ96HA7 1378 aa18.61■□□□□ 0.57
APTX-201ENST00000309615 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
APTX-201ENST00000309615 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
APTX-201ENST00000309615 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
APTX-201ENST00000309615 NRXN1Q9ULB1 1477 aa18.59■□□□□ 0.57
APTX-201ENST00000309615 PIK3C2GO75747 1445 aa18.59■□□□□ 0.57
APTX-201ENST00000309615 STAC3Q96MF2 364 aa18.58■□□□□ 0.57
APTX-201ENST00000309615 TBX22Q9Y458 520 aa18.56■□□□□ 0.56
APTX-201ENST00000309615 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
APTX-201ENST00000309615 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
APTX-201ENST00000309615 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
APTX-201ENST00000309615 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
APTX-201ENST00000309615 METP08581 1390 aa18.53■□□□□ 0.56
APTX-201ENST00000309615 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
APTX-201ENST00000309615 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
APTX-201ENST00000309615 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.55
APTX-201ENST00000309615 SETD1AO15047 1707 aaKnown RBP18.51■□□□□ 0.55
APTX-201ENST00000309615 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
APTX-201ENST00000309615 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
APTX-201ENST00000309615 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
APTX-201ENST00000309615 PIK3R4Q99570 1358 aa18.48■□□□□ 0.55
APTX-201ENST00000309615 ASXL1Q8IXJ9 1541 aa18.48■□□□□ 0.55
APTX-201ENST00000309615 LAMC1P11047 1609 aa18.47■□□□□ 0.55
APTX-201ENST00000309615 KCNA6P17658 529 aa18.47■□□□□ 0.55
APTX-201ENST00000309615 STRCP1A6NGW2 1772 aa18.46■□□□□ 0.55
APTX-201ENST00000309615 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.54
APTX-201ENST00000309615 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.54
APTX-201ENST00000309615 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
APTX-201ENST00000309615 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
APTX-201ENST00000309615 NWD1Q149M9 1564 aa18.44■□□□□ 0.54
APTX-201ENST00000309615 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
APTX-201ENST00000309615 STK26Q9P289 416 aa18.43■□□□□ 0.54
APTX-201ENST00000309615 KIAA1210Q9ULL0 1709 aa18.43■□□□□ 0.54
APTX-201ENST00000309615 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
APTX-201ENST00000309615 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
APTX-201ENST00000309615 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
APTX-201ENST00000309615 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
APTX-201ENST00000309615 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
APTX-201ENST00000309615 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
APTX-201ENST00000309615 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.54
APTX-201ENST00000309615 CPS1P31327 1500 aa18.39■□□□□ 0.53
APTX-201ENST00000309615 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
APTX-201ENST00000309615 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
APTX-201ENST00000309615 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
APTX-201ENST00000309615 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
APTX-201ENST00000309615 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
APTX-201ENST00000309615 TRAK1Q9UPV9 953 aa18.37■□□□□ 0.53
APTX-201ENST00000309615 TECPR2O15040 1411 aa18.37■□□□□ 0.53
APTX-201ENST00000309615 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
APTX-201ENST00000309615 TMEM94Q12767 1356 aa18.36■□□□□ 0.53
APTX-201ENST00000309615 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
APTX-201ENST00000309615 KNDC1Q76NI1 1749 aa18.34■□□□□ 0.53
APTX-201ENST00000309615 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
APTX-201ENST00000309615 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
APTX-201ENST00000309615 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.52
APTX-201ENST00000309615 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
APTX-201ENST00000309615 DLC1Q96QB1 1528 aa18.32■□□□□ 0.52
APTX-201ENST00000309615 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
APTX-201ENST00000309615 SIRT1Q96EB6 747 aa18.31■□□□□ 0.52
APTX-201ENST00000309615 FAM135BQ49AJ0 1406 aa18.31■□□□□ 0.52
APTX-201ENST00000309615 XIRP1Q702N8 1843 aaKnown RBP18.3■□□□□ 0.52
APTX-201ENST00000309615 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
APTX-201ENST00000309615 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
APTX-201ENST00000309615 POGKQ9P215 609 aa18.29■□□□□ 0.52
APTX-201ENST00000309615 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
APTX-201ENST00000309615 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
APTX-201ENST00000309615 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
APTX-201ENST00000309615 C19orf44Q9H6X5 657 aa18.25■□□□□ 0.51
APTX-201ENST00000309615 NALCNQ8IZF0 1738 aa18.25■□□□□ 0.51
APTX-201ENST00000309615 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
APTX-201ENST00000309615 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms