RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 A2ML1A8K2U0 1454 aa12□□□□□ -0.49
CHD6-201ENST00000309279 IDI1Q13907 227 aa12□□□□□ -0.49
CHD6-201ENST00000309279 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
CHD6-201ENST00000309279 TRPM2O94759 1503 aa12□□□□□ -0.49
CHD6-201ENST00000309279 KDM5AP29375 1690 aaKnown RBP11.99□□□□□ -0.49
CHD6-201ENST00000309279 FOXD1Q16676 465 aa11.99□□□□□ -0.49
CHD6-201ENST00000309279 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
CHD6-201ENST00000309279 ADRA2BP18089 450 aa11.98□□□□□ -0.49
CHD6-201ENST00000309279 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
CHD6-201ENST00000309279 UBR1Q8IWV7 1749 aa11.97□□□□□ -0.49
CHD6-201ENST00000309279 ANKRD30BQ9BXX2 1392 aa11.96□□□□□ -0.49
CHD6-201ENST00000309279 THEMISQ8N1K5 641 aaPredicted RBP11.96□□□□□ -0.5
CHD6-201ENST00000309279 TMEM131LA2VDJ0 1609 aa11.95□□□□□ -0.5
CHD6-201ENST00000309279 CLTCL1P53675 1640 aa11.95□□□□□ -0.5
CHD6-201ENST00000309279 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
CHD6-201ENST00000309279 HSPA2P54652 639 aa11.94□□□□□ -0.5
CHD6-201ENST00000309279 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
CHD6-201ENST00000309279 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
CHD6-201ENST00000309279 KIF1BO60333 1816 aa11.93□□□□□ -0.5
CHD6-201ENST00000309279 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
CHD6-201ENST00000309279 SLIT1O75093 1534 aa11.92□□□□□ -0.5
CHD6-201ENST00000309279 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
CHD6-201ENST00000309279 ARHGAP23Q9P227 1491 aa11.92□□□□□ -0.5
CHD6-201ENST00000309279 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
CHD6-201ENST00000309279 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
CHD6-201ENST00000309279 STRCQ7RTU9 1775 aa11.91□□□□□ -0.5
CHD6-201ENST00000309279 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
CHD6-201ENST00000309279 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
CHD6-201ENST00000309279 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
CHD6-201ENST00000309279 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
CHD6-201ENST00000309279 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
CHD6-201ENST00000309279 LTKP29376 864 aa11.88□□□□□ -0.51
CHD6-201ENST00000309279 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
CHD6-201ENST00000309279 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
CHD6-201ENST00000309279 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
CHD6-201ENST00000309279 MED14O60244 1454 aa11.87□□□□□ -0.51
CHD6-201ENST00000309279 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
CHD6-201ENST00000309279 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
CHD6-201ENST00000309279 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHD6-201ENST00000309279 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
CHD6-201ENST00000309279 NEXMIFQ5QGS0 1516 aa11.85□□□□□ -0.51
CHD6-201ENST00000309279 ZNF326Q5BKZ1 582 aaKnown RBP11.84□□□□□ -0.51
CHD6-201ENST00000309279 CLSPNQ9HAW4 1339 aa11.84□□□□□ -0.51
CHD6-201ENST00000309279 PPLO60437 1756 aa11.84□□□□□ -0.51
CHD6-201ENST00000309279 RGL3Q3MIN7 710 aa11.83□□□□□ -0.52
CHD6-201ENST00000309279 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
CHD6-201ENST00000309279 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
CHD6-201ENST00000309279 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
CHD6-201ENST00000309279 NPHP4O75161 1426 aaPredicted RBP11.82□□□□□ -0.52
CHD6-201ENST00000309279 IQGAP1P46940 1657 aa11.82□□□□□ -0.52
CHD6-201ENST00000309279 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
CHD6-201ENST00000309279 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
CHD6-201ENST00000309279 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
CHD6-201ENST00000309279 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
CHD6-201ENST00000309279 NPM3O75607 178 aaKnown RBP11.8□□□□□ -0.52
CHD6-201ENST00000309279 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
CHD6-201ENST00000309279 NUTM2DQ5VT03 806 aaPredicted RBP11.8□□□□□ -0.52
CHD6-201ENST00000309279 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
CHD6-201ENST00000309279 MYOM2P54296 1465 aa11.78□□□□□ -0.52
CHD6-201ENST00000309279 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
CHD6-201ENST00000309279 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
CHD6-201ENST00000309279 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
CHD6-201ENST00000309279 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.52
CHD6-201ENST00000309279 ADGRF5Q8IZF2 1346 aa11.77□□□□□ -0.53
CHD6-201ENST00000309279 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
CHD6-201ENST00000309279 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
CHD6-201ENST00000309279 TBX22Q9Y458 520 aa11.77□□□□□ -0.53
CHD6-201ENST00000309279 DIP2AQ14689 1571 aa11.76□□□□□ -0.53
CHD6-201ENST00000309279 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
CHD6-201ENST00000309279 SLC26A8Q96RN1 970 aa11.75□□□□□ -0.53
CHD6-201ENST00000309279 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
CHD6-201ENST00000309279 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
CHD6-201ENST00000309279 PIK3R4Q99570 1358 aa11.74□□□□□ -0.53
CHD6-201ENST00000309279 ALKQ9UM73 1620 aa11.73□□□□□ -0.53
CHD6-201ENST00000309279 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
CHD6-201ENST00000309279 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
CHD6-201ENST00000309279 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
CHD6-201ENST00000309279 IGSF3O75054 1194 aa11.71□□□□□ -0.53
CHD6-201ENST00000309279 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.53
CHD6-201ENST00000309279 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
CHD6-201ENST00000309279 ZNF335Q9H4Z2 1342 aaPredicted RBP11.71□□□□□ -0.53
CHD6-201ENST00000309279 KCNA6P17658 529 aa11.71□□□□□ -0.54
CHD6-201ENST00000309279 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.54
CHD6-201ENST00000309279 METP08581 1390 aa11.71□□□□□ -0.54
CHD6-201ENST00000309279 STRCP1A6NGW2 1772 aa11.71□□□□□ -0.54
CHD6-201ENST00000309279 LAMC1P11047 1609 aa11.7□□□□□ -0.54
CHD6-201ENST00000309279 LTBP4Q8N2S1 1624 aa11.7□□□□□ -0.54
CHD6-201ENST00000309279 PRAG1Q86YV5 1406 aa11.7□□□□□ -0.54
CHD6-201ENST00000309279 NWD1Q149M9 1564 aa11.69□□□□□ -0.54
CHD6-201ENST00000309279 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
CHD6-201ENST00000309279 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
CHD6-201ENST00000309279 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
CHD6-201ENST00000309279 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
CHD6-201ENST00000309279 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
CHD6-201ENST00000309279 CPS1P31327 1500 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms