RNA–Protein interactions for RNA: ENST00000308924.8

U2AF2-201, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF2, Length 1,698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-201ENST00000308924 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
U2AF2-201ENST00000308924 CD109Q6YHK3 1445 aa23.65■■□□□ 1.38
U2AF2-201ENST00000308924 DISP3Q9P2K9 1392 aa23.65■■□□□ 1.38
U2AF2-201ENST00000308924 TMF1P82094 1093 aa23.64■■□□□ 1.37
U2AF2-201ENST00000308924 SYNMO15061 1565 aa23.63■■□□□ 1.37
U2AF2-201ENST00000308924 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
U2AF2-201ENST00000308924 NEO1Q92859 1461 aa23.6■■□□□ 1.37
U2AF2-201ENST00000308924 PER1O15534 1290 aaPredicted RBP23.6■■□□□ 1.37
U2AF2-201ENST00000308924 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
U2AF2-201ENST00000308924 KIF3BO15066 747 aa23.59■■□□□ 1.37
U2AF2-201ENST00000308924 FRMPD1Q5SYB0 1578 aa23.59■■□□□ 1.37
U2AF2-201ENST00000308924 EIF3AQ14152 1382 aaKnown RBP23.58■■□□□ 1.37
U2AF2-201ENST00000308924 ABCA6Q8N139 1617 aa23.58■■□□□ 1.37
U2AF2-201ENST00000308924 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.36
U2AF2-201ENST00000308924 ADGRB3O60242 1522 aa23.57■■□□□ 1.36
U2AF2-201ENST00000308924 NUDCQ9Y266 331 aa23.57■■□□□ 1.36
U2AF2-201ENST00000308924 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
U2AF2-201ENST00000308924 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
U2AF2-201ENST00000308924 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
U2AF2-201ENST00000308924 PPP4R2Q9NY27 417 aa23.54■■□□□ 1.36
U2AF2-201ENST00000308924 RNF123Q5XPI4 1314 aa23.53■■□□□ 1.36
U2AF2-201ENST00000308924 KDM5AP29375 1690 aaKnown RBP23.53■■□□□ 1.36
U2AF2-201ENST00000308924 MYOM1P52179 1685 aa23.53■■□□□ 1.36
U2AF2-201ENST00000308924 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
U2AF2-201ENST00000308924 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
U2AF2-201ENST00000308924 PTPRMP28827 1452 aa23.51■■□□□ 1.35
U2AF2-201ENST00000308924 ADAMTSL3P82987 1691 aa23.51■■□□□ 1.35
U2AF2-201ENST00000308924 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
U2AF2-201ENST00000308924 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
U2AF2-201ENST00000308924 BLMP54132 1417 aaPredicted RBP23.48■■□□□ 1.35
U2AF2-201ENST00000308924 PPLO60437 1756 aa23.48■■□□□ 1.35
U2AF2-201ENST00000308924 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
U2AF2-201ENST00000308924 ABCC3O15438 1527 aa23.47■■□□□ 1.35
U2AF2-201ENST00000308924 NPC1L1Q9UHC9 1359 aa23.47■■□□□ 1.35
U2AF2-201ENST00000308924 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
U2AF2-201ENST00000308924 SBNO2Q9Y2G9 1366 aa23.45■■□□□ 1.35
U2AF2-201ENST00000308924 PANK3Q9H999 370 aa23.45■■□□□ 1.34
U2AF2-201ENST00000308924 RICTORQ6R327 1708 aa23.45■■□□□ 1.34
U2AF2-201ENST00000308924 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
U2AF2-201ENST00000308924 NPATQ14207 1427 aa23.44■■□□□ 1.34
U2AF2-201ENST00000308924 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
U2AF2-201ENST00000308924 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
U2AF2-201ENST00000308924 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
U2AF2-201ENST00000308924 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
U2AF2-201ENST00000308924 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
U2AF2-201ENST00000308924 MYT1Q01538 1121 aa23.4■■□□□ 1.34
U2AF2-201ENST00000308924 NOS1P29475 1434 aa23.38■■□□□ 1.33
U2AF2-201ENST00000308924 PIK3C2GO75747 1445 aa23.37■■□□□ 1.33
U2AF2-201ENST00000308924 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
U2AF2-201ENST00000308924 ERVK-7P63135 1459 aa23.37■■□□□ 1.33
U2AF2-201ENST00000308924 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
U2AF2-201ENST00000308924 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
U2AF2-201ENST00000308924 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
U2AF2-201ENST00000308924 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.33
U2AF2-201ENST00000308924 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
U2AF2-201ENST00000308924 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
U2AF2-201ENST00000308924 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
U2AF2-201ENST00000308924 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
U2AF2-201ENST00000308924 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
U2AF2-201ENST00000308924 QRICH2Q9H0J4 1663 aa23.3■■□□□ 1.32
U2AF2-201ENST00000308924 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
U2AF2-201ENST00000308924 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
U2AF2-201ENST00000308924 USP32Q8NFA0 1604 aa23.27■■□□□ 1.32
U2AF2-201ENST00000308924 NEXMIFQ5QGS0 1516 aa23.27■■□□□ 1.32
U2AF2-201ENST00000308924 RIMS1Q86UR5 1692 aaKnown RBP23.26■■□□□ 1.31
U2AF2-201ENST00000308924 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
U2AF2-201ENST00000308924 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
U2AF2-201ENST00000308924 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
U2AF2-201ENST00000308924 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
U2AF2-201ENST00000308924 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
U2AF2-201ENST00000308924 GGT6Q6P531 493 aa23.22■■□□□ 1.31
U2AF2-201ENST00000308924 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
U2AF2-201ENST00000308924 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
U2AF2-201ENST00000308924 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
U2AF2-201ENST00000308924 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.31
U2AF2-201ENST00000308924 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
U2AF2-201ENST00000308924 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
U2AF2-201ENST00000308924 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
U2AF2-201ENST00000308924 RCAN3Q9UKA8 241 aa23.19■■□□□ 1.3
U2AF2-201ENST00000308924 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
U2AF2-201ENST00000308924 HSPA2P54652 639 aa23.18■■□□□ 1.3
U2AF2-201ENST00000308924 FANCIQ9NVI1 1328 aa23.17■■□□□ 1.3
U2AF2-201ENST00000308924 AGLP35573 1532 aa23.15■■□□□ 1.3
U2AF2-201ENST00000308924 YEATS2Q9ULM3 1422 aa23.15■■□□□ 1.3
U2AF2-201ENST00000308924 WDR43Q15061 677 aaKnown RBP eCLIP23.15■■□□□ 1.3
U2AF2-201ENST00000308924 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.3
U2AF2-201ENST00000308924 SLC52A1Q9NWF4 448 aa23.13■■□□□ 1.29
U2AF2-201ENST00000308924 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
U2AF2-201ENST00000308924 CHGAP10645 457 aaKnown RBP23.12■■□□□ 1.29
U2AF2-201ENST00000308924 CCDC136Q96JN2 1154 aa23.12■■□□□ 1.29
U2AF2-201ENST00000308924 NGEFQ8N5V2 710 aa23.11■■□□□ 1.29
U2AF2-201ENST00000308924 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
U2AF2-201ENST00000308924 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
U2AF2-201ENST00000308924 MYO5BQ9ULV0 1848 aa23.09■■□□□ 1.29
U2AF2-201ENST00000308924 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
U2AF2-201ENST00000308924 SOCS7O14512 581 aa23.08■■□□□ 1.29
U2AF2-201ENST00000308924 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
U2AF2-201ENST00000308924 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
U2AF2-201ENST00000308924 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
U2AF2-201ENST00000308924 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms