RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
TNFRSF21-201ENST00000296861 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
TNFRSF21-201ENST00000296861 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
TNFRSF21-201ENST00000296861 SEC24BO95487 1268 aa17.07■□□□□ 0.32
TNFRSF21-201ENST00000296861 POGKQ9P215 609 aa17.06■□□□□ 0.32
TNFRSF21-201ENST00000296861 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
TNFRSF21-201ENST00000296861 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
TNFRSF21-201ENST00000296861 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
TNFRSF21-201ENST00000296861 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
TNFRSF21-201ENST00000296861 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
TNFRSF21-201ENST00000296861 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
TNFRSF21-201ENST00000296861 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
TNFRSF21-201ENST00000296861 ABCA8O94911 1581 aa17.02■□□□□ 0.32
TNFRSF21-201ENST00000296861 ITPRIPQ8IWB1 547 aa17.02■□□□□ 0.31
TNFRSF21-201ENST00000296861 E9PSI1 815 aa17.01■□□□□ 0.31
TNFRSF21-201ENST00000296861 CHD1O14646 1710 aa17.01■□□□□ 0.31
TNFRSF21-201ENST00000296861 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
TNFRSF21-201ENST00000296861 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
TNFRSF21-201ENST00000296861 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
TNFRSF21-201ENST00000296861 ITSN2Q9NZM3 1697 aa17■□□□□ 0.31
TNFRSF21-201ENST00000296861 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
TNFRSF21-201ENST00000296861 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
TNFRSF21-201ENST00000296861 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
TNFRSF21-201ENST00000296861 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF21-201ENST00000296861 SYCP2Q9BX26 1530 aa16.99■□□□□ 0.31
TNFRSF21-201ENST00000296861 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
TNFRSF21-201ENST00000296861 PRAG1Q86YV5 1406 aa16.98■□□□□ 0.31
TNFRSF21-201ENST00000296861 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
TNFRSF21-201ENST00000296861 MTHFSP49914 203 aa16.97■□□□□ 0.31
TNFRSF21-201ENST00000296861 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
TNFRSF21-201ENST00000296861 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
TNFRSF21-201ENST00000296861 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF21-201ENST00000296861 APBB1O00213 710 aa16.96■□□□□ 0.31
TNFRSF21-201ENST00000296861 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
TNFRSF21-201ENST00000296861 PDZRN3Q9UPQ7 1066 aa16.96■□□□□ 0.31
TNFRSF21-201ENST00000296861 KDM5CP41229 1560 aa16.94■□□□□ 0.3
TNFRSF21-201ENST00000296861 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
TNFRSF21-201ENST00000296861 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
TNFRSF21-201ENST00000296861 RLBP1P12271 317 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 WASHC2CQ9Y4E1 1318 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
TNFRSF21-201ENST00000296861 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
TNFRSF21-201ENST00000296861 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF21-201ENST00000296861 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
TNFRSF21-201ENST00000296861 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
TNFRSF21-201ENST00000296861 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
TNFRSF21-201ENST00000296861 ADGRL2O95490 1459 aa16.9■□□□□ 0.3
TNFRSF21-201ENST00000296861 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
TNFRSF21-201ENST00000296861 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
TNFRSF21-201ENST00000296861 LNPKQ9C0E8 428 aa16.89■□□□□ 0.3
TNFRSF21-201ENST00000296861 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.3
TNFRSF21-201ENST00000296861 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
TNFRSF21-201ENST00000296861 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
TNFRSF21-201ENST00000296861 SOX12O15370 315 aa16.89■□□□□ 0.29
TNFRSF21-201ENST00000296861 A2MP01023 1474 aa16.88■□□□□ 0.29
TNFRSF21-201ENST00000296861 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
TNFRSF21-201ENST00000296861 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
TNFRSF21-201ENST00000296861 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
TNFRSF21-201ENST00000296861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 ABCC2Q92887 1545 aa16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 FBLN1P23142 703 aa16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 SAMD9LQ8IVG5 1584 aa16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.297e-7■■■□□ 16.9
TNFRSF21-201ENST00000296861 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
TNFRSF21-201ENST00000296861 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
TNFRSF21-201ENST00000296861 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
TNFRSF21-201ENST00000296861 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
TNFRSF21-201ENST00000296861 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
TNFRSF21-201ENST00000296861 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 KANK1Q14678 1352 aa16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 PLCH2O75038 1416 aa16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
TNFRSF21-201ENST00000296861 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.29
TNFRSF21-201ENST00000296861 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.29
TNFRSF21-201ENST00000296861 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.29
TNFRSF21-201ENST00000296861 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.29
TNFRSF21-201ENST00000296861 MYH16Q9H6N6 1097 aa16.83■□□□□ 0.28
TNFRSF21-201ENST00000296861 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
TNFRSF21-201ENST00000296861 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
TNFRSF21-201ENST00000296861 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
TNFRSF21-201ENST00000296861 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
TNFRSF21-201ENST00000296861 PANK2Q9BZ23 570 aa16.82■□□□□ 0.28
TNFRSF21-201ENST00000296861 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 ARID3AQ99856 593 aa16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF21-201ENST00000296861 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms