RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DEPDC5O75140 1603 aa14.66□□□□□ -0.06
CNOT9-202ENST00000295701 IQGAP1P46940 1657 aa14.66□□□□□ -0.06
CNOT9-202ENST00000295701 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
CNOT9-202ENST00000295701 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
CNOT9-202ENST00000295701 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
CNOT9-202ENST00000295701 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
CNOT9-202ENST00000295701 EIF2AK4Q9P2K8 1649 aaKnown RBP14.65□□□□□ -0.06
CNOT9-202ENST00000295701 MAP3K1Q13233 1512 aa14.65□□□□□ -0.06
CNOT9-202ENST00000295701 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
CNOT9-202ENST00000295701 UBR1Q8IWV7 1749 aa14.63□□□□□ -0.07
CNOT9-202ENST00000295701 LTKP29376 864 aa14.63□□□□□ -0.07
CNOT9-202ENST00000295701 ABCC5O15440 1437 aa14.63□□□□□ -0.07
CNOT9-202ENST00000295701 DUOX2Q9NRD8 1548 aa14.62□□□□□ -0.07
CNOT9-202ENST00000295701 KIF15Q9NS87 1388 aa14.61□□□□□ -0.07
CNOT9-202ENST00000295701 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
CNOT9-202ENST00000295701 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
CNOT9-202ENST00000295701 MED1Q15648 1581 aaPredicted RBP14.6□□□□□ -0.07
CNOT9-202ENST00000295701 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
CNOT9-202ENST00000295701 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
CNOT9-202ENST00000295701 CROCC2H7BZ55 1655 aa14.6□□□□□ -0.07
CNOT9-202ENST00000295701 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
CNOT9-202ENST00000295701 DAPK1P53355 1430 aa14.57□□□□□ -0.08
CNOT9-202ENST00000295701 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
CNOT9-202ENST00000295701 XIRP1Q702N8 1843 aaKnown RBP14.56□□□□□ -0.08
CNOT9-202ENST00000295701 ARHGAP31Q2M1Z3 1444 aa14.56□□□□□ -0.08
CNOT9-202ENST00000295701 ARHGAP23Q9P227 1491 aa14.56□□□□□ -0.08
CNOT9-202ENST00000295701 PRDM15P57071 1507 aaPredicted RBP14.56□□□□□ -0.08
CNOT9-202ENST00000295701 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
CNOT9-202ENST00000295701 ERBINQ96RT1 1412 aa14.55□□□□□ -0.08
CNOT9-202ENST00000295701 SLIT1O75093 1534 aa14.55□□□□□ -0.08
CNOT9-202ENST00000295701 EVX2Q03828 476 aa14.54□□□□□ -0.08
CNOT9-202ENST00000295701 IDI1Q13907 227 aa14.54□□□□□ -0.08
CNOT9-202ENST00000295701 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
CNOT9-202ENST00000295701 SYNMO15061 1565 aa14.52□□□□□ -0.08
CNOT9-202ENST00000295701 EID1Q9Y6B2 187 aa14.52□□□□□ -0.09
CNOT9-202ENST00000295701 KANK1Q14678 1352 aa14.5□□□□□ -0.09
CNOT9-202ENST00000295701 TMEM2Q9UHN6 1383 aa14.5□□□□□ -0.09
CNOT9-202ENST00000295701 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
CNOT9-202ENST00000295701 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
CNOT9-202ENST00000295701 ANKRD30AQ9BXX3 1397 aa14.49□□□□□ -0.09
CNOT9-202ENST00000295701 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
CNOT9-202ENST00000295701 EFCAB6Q5THR3 1501 aa14.47□□□□□ -0.09
CNOT9-202ENST00000295701 LMTK2Q8IWU2 1503 aa14.47□□□□□ -0.09
CNOT9-202ENST00000295701 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
CNOT9-202ENST00000295701 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-202ENST00000295701 MYO5BQ9ULV0 1848 aa14.46□□□□□ -0.09
CNOT9-202ENST00000295701 PROM2Q8N271 834 aa14.46□□□□□ -0.09
CNOT9-202ENST00000295701 NOS1P29475 1434 aa14.46□□□□□ -0.09
CNOT9-202ENST00000295701 TET3O43151 1660 aa14.46□□□□□ -0.1
CNOT9-202ENST00000295701 KCNA6P17658 529 aa14.45□□□□□ -0.1
CNOT9-202ENST00000295701 RGS17Q9UGC6 210 aaPredicted RBP14.45□□□□□ -0.1
CNOT9-202ENST00000295701 TMEM94Q12767 1356 aa14.45□□□□□ -0.1
CNOT9-202ENST00000295701 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
CNOT9-202ENST00000295701 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
CNOT9-202ENST00000295701 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
CNOT9-202ENST00000295701 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
CNOT9-202ENST00000295701 BCANQ96GW7 911 aa14.42□□□□□ -0.1
CNOT9-202ENST00000295701 ADGRB3O60242 1522 aa14.41□□□□□ -0.1
CNOT9-202ENST00000295701 SLC52A1Q9NWF4 448 aa14.41□□□□□ -0.1
CNOT9-202ENST00000295701 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
CNOT9-202ENST00000295701 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
CNOT9-202ENST00000295701 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
CNOT9-202ENST00000295701 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
CNOT9-202ENST00000295701 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-202ENST00000295701 CHD2O14647 1828 aaKnown RBP14.37□□□□□ -0.11
CNOT9-202ENST00000295701 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
CNOT9-202ENST00000295701 ZFYVE9O95405 1425 aa14.37□□□□□ -0.11
CNOT9-202ENST00000295701 NWD1Q149M9 1564 aa14.36□□□□□ -0.11
CNOT9-202ENST00000295701 RIMS2Q9UQ26 1411 aa14.36□□□□□ -0.11
CNOT9-202ENST00000295701 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
CNOT9-202ENST00000295701 TMEM131LA2VDJ0 1609 aa14.36□□□□□ -0.11
CNOT9-202ENST00000295701 E9PCH4 1651 aa14.34□□□□□ -0.11
CNOT9-202ENST00000295701 RPRD2Q5VT52 1461 aaKnown RBP14.34□□□□□ -0.11
CNOT9-202ENST00000295701 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
CNOT9-202ENST00000295701 PPARGC1BQ86YN6 1023 aaKnown RBP14.34□□□□□ -0.11
CNOT9-202ENST00000295701 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CNOT9-202ENST00000295701 CD44P16070 742 aaKnown RBP14.33□□□□□ -0.12
CNOT9-202ENST00000295701 SLAIN2Q9P270 581 aa14.33□□□□□ -0.12
CNOT9-202ENST00000295701 MSH6P52701 1360 aa14.33□□□□□ -0.12
CNOT9-202ENST00000295701 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
CNOT9-202ENST00000295701 UNC13BO14795 1591 aa14.32□□□□□ -0.12
CNOT9-202ENST00000295701 ITGAEP38570 1179 aa14.32□□□□□ -0.12
CNOT9-202ENST00000295701 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
CNOT9-202ENST00000295701 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
CNOT9-202ENST00000295701 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
CNOT9-202ENST00000295701 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
CNOT9-202ENST00000295701 FKBP8Q14318 412 aa14.28□□□□□ -0.12
CNOT9-202ENST00000295701 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
CNOT9-202ENST00000295701 IQGAP3Q86VI3 1631 aa14.27□□□□□ -0.12
CNOT9-202ENST00000295701 NUP155O75694 1391 aa14.27□□□□□ -0.12
CNOT9-202ENST00000295701 C14orf37Q86TY3 774 aa14.27□□□□□ -0.13
CNOT9-202ENST00000295701 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
CNOT9-202ENST00000295701 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
CNOT9-202ENST00000295701 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
CNOT9-202ENST00000295701 JCADQ9P266 1359 aa14.24□□□□□ -0.13
CNOT9-202ENST00000295701 COL16A1Q07092 1604 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-202ENST00000295701 GABBR2O75899 941 aa14.24□□□□□ -0.13
CNOT9-202ENST00000295701 AMOTL2Q9Y2J4 779 aa14.24□□□□□ -0.13
CNOT9-202ENST00000295701 SETD1AO15047 1707 aaKnown RBP14.24□□□□□ -0.13
CNOT9-202ENST00000295701 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms