RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
KRTCAP3-201ENST00000288873 LTKP29376 864 aa28.12■■■□□ 2.09
KRTCAP3-201ENST00000288873 ZFYVE9O95405 1425 aa28.1■■■□□ 2.09
KRTCAP3-201ENST00000288873 SPATA31E1Q6ZUB1 1445 aa28.1■■■□□ 2.09
KRTCAP3-201ENST00000288873 SCAF11Q99590 1463 aaKnown RBP28.1■■■□□ 2.09
KRTCAP3-201ENST00000288873 HDGFP51858 240 aaKnown RBP28.09■■■□□ 2.09
KRTCAP3-201ENST00000288873 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
KRTCAP3-201ENST00000288873 NEURL4Q96JN8 1562 aa28.08■■■□□ 2.09
KRTCAP3-201ENST00000288873 NUTM2DQ5VT03 806 aaPredicted RBP28.07■■■□□ 2.08
KRTCAP3-201ENST00000288873 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.07■■■□□ 2.08
KRTCAP3-201ENST00000288873 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
KRTCAP3-201ENST00000288873 MED14O60244 1454 aa28.05■■■□□ 2.08
KRTCAP3-201ENST00000288873 NEXMIFQ5QGS0 1516 aa28.05■■■□□ 2.08
KRTCAP3-201ENST00000288873 NPHP4O75161 1426 aaPredicted RBP28.04■■■□□ 2.08
KRTCAP3-201ENST00000288873 RPGRIP1LQ68CZ1 1315 aa28.04■■■□□ 2.08
KRTCAP3-201ENST00000288873 SIN3AQ96ST3 1273 aa28.03■■■□□ 2.08
KRTCAP3-201ENST00000288873 IQGAP1P46940 1657 aa28.01■■■□□ 2.07
KRTCAP3-201ENST00000288873 PPLO60437 1756 aa28.01■■■□□ 2.07
KRTCAP3-201ENST00000288873 NEUROD1Q13562 356 aa27.99■■■□□ 2.07
KRTCAP3-201ENST00000288873 SENP3Q9H4L4 574 aaPredicted RBP27.99■■■□□ 2.07
KRTCAP3-201ENST00000288873 BCANQ96GW7 911 aa27.98■■■□□ 2.07
KRTCAP3-201ENST00000288873 PLEKHG1Q9ULL1 1385 aa27.98■■■□□ 2.07
KRTCAP3-201ENST00000288873 IFT172Q9UG01 1749 aa27.97■■■□□ 2.07
KRTCAP3-201ENST00000288873 VGFO15240 615 aaPredicted RBP27.96■■■□□ 2.07
KRTCAP3-201ENST00000288873 CCER1Q8TC90 406 aaPredicted RBP27.95■■■□□ 2.06
KRTCAP3-201ENST00000288873 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
KRTCAP3-201ENST00000288873 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
KRTCAP3-201ENST00000288873 LTBP4Q8N2S1 1624 aa27.89■■■□□ 2.06
KRTCAP3-201ENST00000288873 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.05
KRTCAP3-201ENST00000288873 CLSPNQ9HAW4 1339 aa27.89■■■□□ 2.05
KRTCAP3-201ENST00000288873 KDM2AQ9Y2K7 1162 aa27.88■■■□□ 2.05
KRTCAP3-201ENST00000288873 SETBP1Q9Y6X0 1596 aa27.87■■■□□ 2.05
KRTCAP3-201ENST00000288873 NRXN3Q9Y4C0 1643 aa27.86■■■□□ 2.05
KRTCAP3-201ENST00000288873 MYOM2P54296 1465 aa27.86■■■□□ 2.05
KRTCAP3-201ENST00000288873 ADAMTS13Q76LX8 1427 aa27.85■■■□□ 2.05
KRTCAP3-201ENST00000288873 TBX22Q9Y458 520 aa27.84■■■□□ 2.05
KRTCAP3-201ENST00000288873 L3MBTL2Q969R5 705 aa27.83■■■□□ 2.05
KRTCAP3-201ENST00000288873 IQSEC2Q5JU85 1478 aa27.83■■■□□ 2.04
KRTCAP3-201ENST00000288873 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
KRTCAP3-201ENST00000288873 STAC3Q96MF2 364 aa27.82■■■□□ 2.04
KRTCAP3-201ENST00000288873 ZNF335Q9H4Z2 1342 aaPredicted RBP27.81■■■□□ 2.04
KRTCAP3-201ENST00000288873 NRXN1Q9ULB1 1477 aa27.81■■■□□ 2.04
KRTCAP3-201ENST00000288873 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
KRTCAP3-201ENST00000288873 TONSLQ96HA7 1378 aa27.79■■■□□ 2.04
KRTCAP3-201ENST00000288873 ALKQ9UM73 1620 aa27.78■■■□□ 2.04
KRTCAP3-201ENST00000288873 SETD1AO15047 1707 aaKnown RBP27.75■■■□□ 2.03
KRTCAP3-201ENST00000288873 METP08581 1390 aa27.73■■■□□ 2.03
KRTCAP3-201ENST00000288873 STRCP1A6NGW2 1772 aa27.73■■■□□ 2.03
KRTCAP3-201ENST00000288873 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
KRTCAP3-201ENST00000288873 CHD2O14647 1828 aaKnown RBP27.72■■■□□ 2.03
KRTCAP3-201ENST00000288873 KCNA6P17658 529 aa27.72■■■□□ 2.03
KRTCAP3-201ENST00000288873 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
KRTCAP3-201ENST00000288873 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
KRTCAP3-201ENST00000288873 LAMC1P11047 1609 aa27.7■■■□□ 2.02
KRTCAP3-201ENST00000288873 PRAG1Q86YV5 1406 aa27.68■■■□□ 2.02
KRTCAP3-201ENST00000288873 PTPRUQ92729 1446 aa27.68■■■□□ 2.02
KRTCAP3-201ENST00000288873 NWD1Q149M9 1564 aa27.68■■■□□ 2.02
KRTCAP3-201ENST00000288873 TMEM132EQ6IEE7 984 aa27.66■■■□□ 2.02
KRTCAP3-201ENST00000288873 AMOTL2Q9Y2J4 779 aa27.66■■■□□ 2.02
KRTCAP3-201ENST00000288873 CPS1P31327 1500 aa27.66■■■□□ 2.02
KRTCAP3-201ENST00000288873 ASXL1Q8IXJ9 1541 aa27.64■■■□□ 2.02
KRTCAP3-201ENST00000288873 TIMELESSQ9UNS1 1208 aa27.64■■■□□ 2.02
KRTCAP3-201ENST00000288873 XRN1Q8IZH2 1706 aaKnown RBP27.62■■■□□ 2.01
KRTCAP3-201ENST00000288873 NKTRP30414 1462 aaKnown RBP27.62■■■□□ 2.01
KRTCAP3-201ENST00000288873 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
KRTCAP3-201ENST00000288873 PROSER2Q86WR7 435 aaPredicted RBP27.6■■■□□ 2.01
KRTCAP3-201ENST00000288873 NBPF8Q3BBV2 869 aa27.59■■■□□ 2.01
KRTCAP3-201ENST00000288873 STK26Q9P289 416 aa27.59■■■□□ 2.01
KRTCAP3-201ENST00000288873 LRRC7Q96NW7 1537 aa27.58■■■□□ 2.01
KRTCAP3-201ENST00000288873 YTHDC2Q9H6S0 1430 aaKnown RBP27.58■■■□□ 2
KRTCAP3-201ENST00000288873 ADGRB1O14514 1584 aa27.57■■■□□ 2
KRTCAP3-201ENST00000288873 LRPPRCP42704 1394 aaKnown RBP27.57■■■□□ 2
KRTCAP3-201ENST00000288873 TRPM1Q7Z4N2 1603 aa27.56■■■□□ 2
KRTCAP3-201ENST00000288873 NBPF1Q3BBV0 1214 aa27.55■■■□□ 2
KRTCAP3-201ENST00000288873 RBM33Q96EV2 1170 aaKnown RBP27.54■■■□□ 2
KRTCAP3-201ENST00000288873 TMEM94Q12767 1356 aa27.53■■■□□ 2
KRTCAP3-201ENST00000288873 ABCC11Q96J66 1382 aa27.53■■■□□ 2
KRTCAP3-201ENST00000288873 DISP3Q9P2K9 1392 aa27.53■■■□□ 2
KRTCAP3-201ENST00000288873 UBAP1LF5GYI3 381 aa27.53■■■□□ 2
KRTCAP3-201ENST00000288873 XIRP1Q702N8 1843 aaKnown RBP27.52■■■□□ 2
KRTCAP3-201ENST00000288873 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
KRTCAP3-201ENST00000288873 PTCH1Q13635 1447 aa27.51■■□□□ 1.99
KRTCAP3-201ENST00000288873 ROBO2Q9HCK4 1378 aa27.51■■□□□ 1.99
KRTCAP3-201ENST00000288873 TECPR2O15040 1411 aa27.5■■□□□ 1.99
KRTCAP3-201ENST00000288873 TRAK1Q9UPV9 953 aa27.48■■□□□ 1.99
KRTCAP3-201ENST00000288873 ROCK2O75116 1388 aaKnown RBP27.48■■□□□ 1.99
KRTCAP3-201ENST00000288873 RALGAPBQ86X10 1494 aa27.46■■□□□ 1.99
KRTCAP3-201ENST00000288873 WAPLQ7Z5K2 1190 aa27.45■■□□□ 1.98
KRTCAP3-201ENST00000288873 C14orf37Q86TY3 774 aa27.45■■□□□ 1.98
KRTCAP3-201ENST00000288873 NCOA3Q9Y6Q9 1424 aa27.44■■□□□ 1.98
KRTCAP3-201ENST00000288873 SIRT1Q96EB6 747 aa27.44■■□□□ 1.98
KRTCAP3-201ENST00000288873 DLC1Q96QB1 1528 aa27.44■■□□□ 1.98
KRTCAP3-201ENST00000288873 FAM135BQ49AJ0 1406 aa27.42■■□□□ 1.98
KRTCAP3-201ENST00000288873 GPRASP1Q5JY77 1395 aa27.41■■□□□ 1.98
KRTCAP3-201ENST00000288873 PLEKHH1Q9ULM0 1364 aa27.41■■□□□ 1.98
KRTCAP3-201ENST00000288873 ILDR2Q71H61 639 aa27.41■■□□□ 1.98
KRTCAP3-201ENST00000288873 PRAM1Q96QH2 718 aa27.41■■□□□ 1.98
KRTCAP3-201ENST00000288873 POGKQ9P215 609 aa27.4■■□□□ 1.98
KRTCAP3-201ENST00000288873 ARHGEF28Q8N1W1 1705 aaKnown RBP27.4■■□□□ 1.98
KRTCAP3-201ENST00000288873 MSH6P52701 1360 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms