RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
SSRP1-201ENST00000278412 PIK3C2BO00750 1634 aa16.46■□□□□ 0.23
SSRP1-201ENST00000278412 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
SSRP1-201ENST00000278412 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
SSRP1-201ENST00000278412 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
SSRP1-201ENST00000278412 IFT172Q9UG01 1749 aa16.43■□□□□ 0.22
SSRP1-201ENST00000278412 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
SSRP1-201ENST00000278412 PPLO60437 1756 aa16.4■□□□□ 0.22
SSRP1-201ENST00000278412 TMEM131LA2VDJ0 1609 aa16.4■□□□□ 0.22
SSRP1-201ENST00000278412 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
SSRP1-201ENST00000278412 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SSRP1-201ENST00000278412 NEXMIFQ5QGS0 1516 aa16.38■□□□□ 0.21
SSRP1-201ENST00000278412 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
SSRP1-201ENST00000278412 TESK2Q96S53 571 aa16.38■□□□□ 0.21
SSRP1-201ENST00000278412 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
SSRP1-201ENST00000278412 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
SSRP1-201ENST00000278412 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
SSRP1-201ENST00000278412 MYOM2P54296 1465 aa16.36■□□□□ 0.21
SSRP1-201ENST00000278412 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
SSRP1-201ENST00000278412 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
SSRP1-201ENST00000278412 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
SSRP1-201ENST00000278412 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
SSRP1-201ENST00000278412 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
SSRP1-201ENST00000278412 A2ML1A8K2U0 1454 aa16.33■□□□□ 0.21
SSRP1-201ENST00000278412 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
SSRP1-201ENST00000278412 TNRQ92752 1358 aa16.32■□□□□ 0.2
SSRP1-201ENST00000278412 STK26Q9P289 416 aa16.32■□□□□ 0.2
SSRP1-201ENST00000278412 C3P01024 1663 aa16.32■□□□□ 0.2
SSRP1-201ENST00000278412 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
SSRP1-201ENST00000278412 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
SSRP1-201ENST00000278412 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
SSRP1-201ENST00000278412 ADGRB1O14514 1584 aa16.28■□□□□ 0.2
SSRP1-201ENST00000278412 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
SSRP1-201ENST00000278412 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-201ENST00000278412 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-201ENST00000278412 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
SSRP1-201ENST00000278412 LAMC1P11047 1609 aa16.28■□□□□ 0.2
SSRP1-201ENST00000278412 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
SSRP1-201ENST00000278412 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
SSRP1-201ENST00000278412 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
SSRP1-201ENST00000278412 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.2
SSRP1-201ENST00000278412 LTKP29376 864 aa16.25■□□□□ 0.19
SSRP1-201ENST00000278412 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
SSRP1-201ENST00000278412 ANP32CO43423 234 aa16.24■□□□□ 0.19
SSRP1-201ENST00000278412 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
SSRP1-201ENST00000278412 PTPRMP28827 1452 aa16.24■□□□□ 0.19
SSRP1-201ENST00000278412 ZFYVE9O95405 1425 aa16.23■□□□□ 0.19
SSRP1-201ENST00000278412 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
SSRP1-201ENST00000278412 BCANQ96GW7 911 aa16.21■□□□□ 0.19
SSRP1-201ENST00000278412 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
SSRP1-201ENST00000278412 TMF1P82094 1093 aa16.2■□□□□ 0.18
SSRP1-201ENST00000278412 METP08581 1390 aa16.19■□□□□ 0.18
SSRP1-201ENST00000278412 TMEM2Q9UHN6 1383 aa16.19■□□□□ 0.18
SSRP1-201ENST00000278412 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
SSRP1-201ENST00000278412 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
SSRP1-201ENST00000278412 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
SSRP1-201ENST00000278412 WAPLQ7Z5K2 1190 aa16.18■□□□□ 0.18
SSRP1-201ENST00000278412 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
SSRP1-201ENST00000278412 PANK3Q9H999 370 aa16.18■□□□□ 0.18
SSRP1-201ENST00000278412 SETBP1Q9Y6X0 1596 aa16.18■□□□□ 0.18
SSRP1-201ENST00000278412 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
SSRP1-201ENST00000278412 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
SSRP1-201ENST00000278412 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
SSRP1-201ENST00000278412 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
SSRP1-201ENST00000278412 SENP3-EIF4A1A0A087X0R7 540 aa16.16■□□□□ 0.18
SSRP1-201ENST00000278412 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
SSRP1-201ENST00000278412 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
SSRP1-201ENST00000278412 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
SSRP1-201ENST00000278412 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
SSRP1-201ENST00000278412 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
SSRP1-201ENST00000278412 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
SSRP1-201ENST00000278412 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
SSRP1-201ENST00000278412 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
SSRP1-201ENST00000278412 PER1O15534 1290 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-201ENST00000278412 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
SSRP1-201ENST00000278412 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
SSRP1-201ENST00000278412 MYOM1P52179 1685 aa16.12■□□□□ 0.17
SSRP1-201ENST00000278412 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
SSRP1-201ENST00000278412 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
SSRP1-201ENST00000278412 TULP4Q9NRJ4 1543 aa16.1■□□□□ 0.17
SSRP1-201ENST00000278412 POGKQ9P215 609 aa16.1■□□□□ 0.17
SSRP1-201ENST00000278412 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
SSRP1-201ENST00000278412 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
SSRP1-201ENST00000278412 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
SSRP1-201ENST00000278412 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.16
SSRP1-201ENST00000278412 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
SSRP1-201ENST00000278412 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
SSRP1-201ENST00000278412 KDM5AP29375 1690 aaKnown RBP16.06■□□□□ 0.16
SSRP1-201ENST00000278412 PTPRUQ92729 1446 aa16.06■□□□□ 0.16
SSRP1-201ENST00000278412 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
SSRP1-201ENST00000278412 CCER2I3L3R5 266 aa16.05■□□□□ 0.16
SSRP1-201ENST00000278412 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
SSRP1-201ENST00000278412 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
SSRP1-201ENST00000278412 ROBO2Q9HCK4 1378 aa16.05■□□□□ 0.16
SSRP1-201ENST00000278412 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
SSRP1-201ENST00000278412 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
SSRP1-201ENST00000278412 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
SSRP1-201ENST00000278412 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
SSRP1-201ENST00000278412 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
SSRP1-201ENST00000278412 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms