RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 SCAF11Q99590 1463 aaKnown RBP24.85■■□□□ 1.57
SMARCC2-201ENST00000267064 B4GALNT3Q6L9W6 998 aa24.85■■□□□ 1.57
SMARCC2-201ENST00000267064 MLH3Q9UHC1 1453 aa24.84■■□□□ 1.57
SMARCC2-201ENST00000267064 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
SMARCC2-201ENST00000267064 PRAM1Q96QH2 718 aa24.83■■□□□ 1.57
SMARCC2-201ENST00000267064 C14orf93Q9H972 538 aaKnown RBP24.83■■□□□ 1.56
SMARCC2-201ENST00000267064 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
SMARCC2-201ENST00000267064 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
SMARCC2-201ENST00000267064 BCORL1Q5H9F3 1711 aa24.82■■□□□ 1.56
SMARCC2-201ENST00000267064 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
SMARCC2-201ENST00000267064 RPGRIP1LQ68CZ1 1315 aa24.81■■□□□ 1.56
SMARCC2-201ENST00000267064 PTPRTO14522 1441 aa24.81■■□□□ 1.56
SMARCC2-201ENST00000267064 BRD4O60885 1362 aaPredicted RBP24.8■■□□□ 1.56
SMARCC2-201ENST00000267064 PER1O15534 1290 aaPredicted RBP24.8■■□□□ 1.56
SMARCC2-201ENST00000267064 PPP2R1AP30153 589 aa24.8■■□□□ 1.56
SMARCC2-201ENST00000267064 NUDCQ9Y266 331 aa24.8■■□□□ 1.56
SMARCC2-201ENST00000267064 ADAMTS8Q9UP79 889 aa24.8■■□□□ 1.56
SMARCC2-201ENST00000267064 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
SMARCC2-201ENST00000267064 TRPM2O94759 1503 aa24.78■■□□□ 1.56
SMARCC2-201ENST00000267064 E9PCH4 1651 aa24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 HECW2Q9P2P5 1572 aa24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 INO80Q9ULG1 1556 aaPredicted RBP24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
SMARCC2-201ENST00000267064 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
SMARCC2-201ENST00000267064 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
SMARCC2-201ENST00000267064 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
SMARCC2-201ENST00000267064 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
SMARCC2-201ENST00000267064 CDCA7LQ96GN5 454 aa24.74■■□□□ 1.55
SMARCC2-201ENST00000267064 KIDINS220Q9ULH0 1771 aa24.74■■□□□ 1.55
SMARCC2-201ENST00000267064 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
SMARCC2-201ENST00000267064 WAPLQ7Z5K2 1190 aa24.74■■□□□ 1.55
SMARCC2-201ENST00000267064 CFAP53Q96M91 514 aa24.74■■□□□ 1.55
SMARCC2-201ENST00000267064 SOX12O15370 315 aa24.72■■□□□ 1.55
SMARCC2-201ENST00000267064 TXNDC2Q86VQ3 553 aa24.72■■□□□ 1.55
SMARCC2-201ENST00000267064 CFAP74Q9C0B2 1584 aa24.72■■□□□ 1.55
SMARCC2-201ENST00000267064 EIF2AK4Q9P2K8 1649 aaKnown RBP24.72■■□□□ 1.55
SMARCC2-201ENST00000267064 COL17A1Q9UMD9 1497 aaPredicted RBP24.71■■□□□ 1.55
SMARCC2-201ENST00000267064 GGNBP2Q9H3C7 697 aa24.71■■□□□ 1.55
SMARCC2-201ENST00000267064 TET3O43151 1660 aa24.7■■□□□ 1.55
SMARCC2-201ENST00000267064 CANXP27824 592 aaKnown RBP24.7■■□□□ 1.54
SMARCC2-201ENST00000267064 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
SMARCC2-201ENST00000267064 HDGFL2Q7Z4V5 671 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-201ENST00000267064 APAF1O14727 1248 aa24.68■■□□□ 1.54
SMARCC2-201ENST00000267064 PPP4R2Q9NY27 417 aa24.68■■□□□ 1.54
SMARCC2-201ENST00000267064 EFCAB6Q5THR3 1501 aa24.68■■□□□ 1.54
SMARCC2-201ENST00000267064 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 U2AF1L5P0DN76 240 aaPredicted RBP24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 U2AF1Q01081 240 aaKnown RBP eCLIP24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 RCAN3Q9UKA8 241 aa24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 AMER1Q5JTC6 1135 aaPredicted RBP24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 SLC26A8Q96RN1 970 aa24.67■■□□□ 1.54
SMARCC2-201ENST00000267064 CARD14Q9BXL6 1004 aa24.65■■□□□ 1.54
SMARCC2-201ENST00000267064 TRPM1Q7Z4N2 1603 aa24.65■■□□□ 1.54
SMARCC2-201ENST00000267064 EID1Q9Y6B2 187 aa24.65■■□□□ 1.54
SMARCC2-201ENST00000267064 ABCC3O15438 1527 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 PLIN1O60240 522 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 CDK19Q9BWU1 502 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 CEP152O94986 1710 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 NEFMP07197 916 aa24.63■■□□□ 1.53
SMARCC2-201ENST00000267064 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
SMARCC2-201ENST00000267064 MTHFSP49914 203 aa24.62■■□□□ 1.53
SMARCC2-201ENST00000267064 PARD3Q8TEW0 1356 aa24.62■■□□□ 1.53
SMARCC2-201ENST00000267064 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
SMARCC2-201ENST00000267064 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
SMARCC2-201ENST00000267064 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
SMARCC2-201ENST00000267064 C14orf37Q86TY3 774 aa24.59■■□□□ 1.53
SMARCC2-201ENST00000267064 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
SMARCC2-201ENST00000267064 RNF17Q9BXT8 1623 aaKnown RBP24.58■■□□□ 1.53
SMARCC2-201ENST00000267064 ZMYM3Q14202 1370 aa24.57■■□□□ 1.52
SMARCC2-201ENST00000267064 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
SMARCC2-201ENST00000267064 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
SMARCC2-201ENST00000267064 PPP6R1Q9UPN7 881 aa24.55■■□□□ 1.52
SMARCC2-201ENST00000267064 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
SMARCC2-201ENST00000267064 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
SMARCC2-201ENST00000267064 KIF1BO60333 1816 aa24.52■■□□□ 1.52
SMARCC2-201ENST00000267064 TSHZ2Q9NRE2 1034 aa24.51■■□□□ 1.51
SMARCC2-201ENST00000267064 MAPK8IP3Q9UPT6 1336 aa24.51■■□□□ 1.51
SMARCC2-201ENST00000267064 MADDQ8WXG6 1647 aa24.51■■□□□ 1.51
SMARCC2-201ENST00000267064 ZBTB7CA1YPR0 619 aa24.5■■□□□ 1.51
SMARCC2-201ENST00000267064 FBLN1P23142 703 aa24.5■■□□□ 1.51
SMARCC2-201ENST00000267064 FRAT1Q92837 279 aaPredicted RBP24.5■■□□□ 1.51
SMARCC2-201ENST00000267064 MROH1Q8NDA8 1641 aa24.5■■□□□ 1.51
SMARCC2-201ENST00000267064 LAS1LQ9Y4W2 734 aaKnown RBP24.49■■□□□ 1.51
SMARCC2-201ENST00000267064 RIMS2Q9UQ26 1411 aa24.48■■□□□ 1.51
SMARCC2-201ENST00000267064 TNRQ92752 1358 aa24.48■■□□□ 1.51
SMARCC2-201ENST00000267064 ERICH6Q7L0X2 663 aa24.47■■□□□ 1.51
SMARCC2-201ENST00000267064 EXOC6Q8TAG9 804 aa24.47■■□□□ 1.51
SMARCC2-201ENST00000267064 MYOM2P54296 1465 aa24.47■■□□□ 1.51
SMARCC2-201ENST00000267064 DEPDC5O75140 1603 aa24.46■■□□□ 1.51
SMARCC2-201ENST00000267064 VWDEQ8N2E2 1590 aa24.46■■□□□ 1.51
SMARCC2-201ENST00000267064 PIK3C2GO75747 1445 aa24.46■■□□□ 1.51
SMARCC2-201ENST00000267064 RRP1P56182 461 aaKnown RBP24.46■■□□□ 1.51
SMARCC2-201ENST00000267064 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.46■■□□□ 1.51
SMARCC2-201ENST00000267064 DIP2BQ9P265 1576 aa24.45■■□□□ 1.5
SMARCC2-201ENST00000267064 ERVK-7P63135 1459 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms