RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
COPE-201ENST00000262812 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.44■■□□□ 1.98
COPE-201ENST00000262812 MPHOSPH9Q99550 1183 aa27.44■■□□□ 1.98
COPE-201ENST00000262812 UBAP1LF5GYI3 381 aa27.42■■□□□ 1.98
COPE-201ENST00000262812 ZFYVE9O95405 1425 aa27.41■■□□□ 1.98
COPE-201ENST00000262812 CPS1P31327 1500 aa27.39■■□□□ 1.98
COPE-201ENST00000262812 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
COPE-201ENST00000262812 SPHKAPQ2M3C7 1700 aa27.37■■□□□ 1.97
COPE-201ENST00000262812 MYO5BQ9ULV0 1848 aa27.37■■□□□ 1.97
COPE-201ENST00000262812 RAB3GAP2Q9H2M9 1393 aa27.36■■□□□ 1.97
COPE-201ENST00000262812 PLEKHG1Q9ULL1 1385 aa27.36■■□□□ 1.97
COPE-201ENST00000262812 TRPM2O94759 1503 aa27.34■■□□□ 1.97
COPE-201ENST00000262812 KCNA6P17658 529 aa27.33■■□□□ 1.97
COPE-201ENST00000262812 ACIN1Q9UKV3 1341 aaKnown RBP27.33■■□□□ 1.97
COPE-201ENST00000262812 CLTCL1P53675 1640 aa27.31■■□□□ 1.96
COPE-201ENST00000262812 TBX22Q9Y458 520 aa27.3■■□□□ 1.96
COPE-201ENST00000262812 LRRC7Q96NW7 1537 aa27.3■■□□□ 1.96
COPE-201ENST00000262812 PIP4K2BP78356 416 aa27.29■■□□□ 1.96
COPE-201ENST00000262812 RBM33Q96EV2 1170 aaKnown RBP27.29■■□□□ 1.96
COPE-201ENST00000262812 SCAF1Q9H7N4 1312 aaKnown RBP27.29■■□□□ 1.96
COPE-201ENST00000262812 STRCP1A6NGW2 1772 aa27.28■■□□□ 1.96
COPE-201ENST00000262812 TOM1O60784 492 aa27.28■■□□□ 1.96
COPE-201ENST00000262812 PROSER2Q86WR7 435 aaPredicted RBP27.28■■□□□ 1.96
COPE-201ENST00000262812 RGL3Q3MIN7 710 aa27.23■■□□□ 1.95
COPE-201ENST00000262812 ADAMTS13Q76LX8 1427 aa27.23■■□□□ 1.95
COPE-201ENST00000262812 CCDC144AA2RUR9 1427 aa27.22■■□□□ 1.95
COPE-201ENST00000262812 TMEM94Q12767 1356 aa27.2■■□□□ 1.94
COPE-201ENST00000262812 VGFO15240 615 aaPredicted RBP27.19■■□□□ 1.94
COPE-201ENST00000262812 HRCP23327 699 aa27.19■■□□□ 1.94
COPE-201ENST00000262812 RPGRIP1LQ68CZ1 1315 aa27.17■■□□□ 1.94
COPE-201ENST00000262812 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
COPE-201ENST00000262812 KIF1BO60333 1816 aa27.16■■□□□ 1.94
COPE-201ENST00000262812 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
COPE-201ENST00000262812 METP08581 1390 aa27.1■■□□□ 1.93
COPE-201ENST00000262812 PIK3R4Q99570 1358 aa27.1■■□□□ 1.93
COPE-201ENST00000262812 C14orf37Q86TY3 774 aa27.1■■□□□ 1.93
COPE-201ENST00000262812 PTPRUQ92729 1446 aa27.09■■□□□ 1.93
COPE-201ENST00000262812 NKTRP30414 1462 aaKnown RBP27.09■■□□□ 1.93
COPE-201ENST00000262812 DIP2AQ14689 1571 aa27.09■■□□□ 1.93
COPE-201ENST00000262812 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
COPE-201ENST00000262812 HSPA1LP34931 641 aa27.08■■□□□ 1.93
COPE-201ENST00000262812 SPATA31E1Q6ZUB1 1445 aa27.07■■□□□ 1.92
COPE-201ENST00000262812 SETBP1Q9Y6X0 1596 aa27.07■■□□□ 1.92
COPE-201ENST00000262812 ADGRF5Q8IZF2 1346 aa27.07■■□□□ 1.92
COPE-201ENST00000262812 ALKQ9UM73 1620 aa27.05■■□□□ 1.92
COPE-201ENST00000262812 CHD2O14647 1828 aaKnown RBP27.05■■□□□ 1.92
COPE-201ENST00000262812 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
COPE-201ENST00000262812 MSH6P52701 1360 aa27.04■■□□□ 1.92
COPE-201ENST00000262812 ANKRD30BQ9BXX2 1392 aa27.04■■□□□ 1.92
COPE-201ENST00000262812 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
COPE-201ENST00000262812 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
COPE-201ENST00000262812 C19orf44Q9H6X5 657 aa26.97■■□□□ 1.91
COPE-201ENST00000262812 PPLO60437 1756 aa26.96■■□□□ 1.91
COPE-201ENST00000262812 ATF3P18847 181 aa26.95■■□□□ 1.9
COPE-201ENST00000262812 NCOA3Q9Y6Q9 1424 aa26.95■■□□□ 1.9
COPE-201ENST00000262812 STK26Q9P289 416 aa26.93■■□□□ 1.9
COPE-201ENST00000262812 KDM2AQ9Y2K7 1162 aa26.93■■□□□ 1.9
COPE-201ENST00000262812 TMEM132EQ6IEE7 984 aa26.92■■□□□ 1.9
COPE-201ENST00000262812 CADPS2Q86UW7 1296 aa26.91■■□□□ 1.9
COPE-201ENST00000262812 TRIM26Q12899 539 aaPredicted RBP26.9■■□□□ 1.9
COPE-201ENST00000262812 DCAF11Q8TEB1 546 aa26.9■■□□□ 1.9
COPE-201ENST00000262812 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
COPE-201ENST00000262812 XRN1Q8IZH2 1706 aaKnown RBP26.88■■□□□ 1.89
COPE-201ENST00000262812 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
COPE-201ENST00000262812 CFAP70Q5T0N1 1121 aa26.87■■□□□ 1.89
COPE-201ENST00000262812 PIK3C2GO75747 1445 aa26.85■■□□□ 1.89
COPE-201ENST00000262812 C14orf93Q9H972 538 aaKnown RBP26.85■■□□□ 1.89
COPE-201ENST00000262812 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
COPE-201ENST00000262812 DISP3Q9P2K9 1392 aa26.82■■□□□ 1.88
COPE-201ENST00000262812 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
COPE-201ENST00000262812 WAPLQ7Z5K2 1190 aa26.81■■□□□ 1.88
COPE-201ENST00000262812 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.81■■□□□ 1.88
COPE-201ENST00000262812 LRPPRCP42704 1394 aaKnown RBP26.79■■□□□ 1.88
COPE-201ENST00000262812 PTCH1Q13635 1447 aa26.79■■□□□ 1.88
COPE-201ENST00000262812 MYOM2P54296 1465 aa26.79■■□□□ 1.88
COPE-201ENST00000262812 DHX57Q6P158 1386 aaKnown RBP26.78■■□□□ 1.88
COPE-201ENST00000262812 ROBO1Q9Y6N7 1651 aa26.78■■□□□ 1.88
COPE-201ENST00000262812 NRXN1Q9ULB1 1477 aa26.77■■□□□ 1.88
COPE-201ENST00000262812 ADGRL3Q9HAR2 1447 aa26.77■■□□□ 1.88
COPE-201ENST00000262812 ABCC11Q96J66 1382 aa26.75■■□□□ 1.87
COPE-201ENST00000262812 BRINP3Q76B58 766 aa26.75■■□□□ 1.87
COPE-201ENST00000262812 SIN3AQ96ST3 1273 aa26.75■■□□□ 1.87
COPE-201ENST00000262812 DCCP43146 1447 aa26.74■■□□□ 1.87
COPE-201ENST00000262812 YTHDC2Q9H6S0 1430 aaKnown RBP26.74■■□□□ 1.87
COPE-201ENST00000262812 STAC3Q96MF2 364 aa26.74■■□□□ 1.87
COPE-201ENST00000262812 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
COPE-201ENST00000262812 ASXL1Q8IXJ9 1541 aa26.72■■□□□ 1.87
COPE-201ENST00000262812 PRAG1Q86YV5 1406 aa26.72■■□□□ 1.87
COPE-201ENST00000262812 PLEKHH1Q9ULM0 1364 aa26.71■■□□□ 1.87
COPE-201ENST00000262812 MST1RQ04912 1400 aa26.71■■□□□ 1.87
COPE-201ENST00000262812 TECPR2O15040 1411 aa26.68■■□□□ 1.86
COPE-201ENST00000262812 SAFB2Q14151 953 aaKnown RBP eCLIP26.68■■□□□ 1.86
COPE-201ENST00000262812 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
COPE-201ENST00000262812 PRAM1Q96QH2 718 aa26.67■■□□□ 1.86
COPE-201ENST00000262812 TRAK1Q9UPV9 953 aa26.67■■□□□ 1.86
COPE-201ENST00000262812 NALCNQ8IZF0 1738 aa26.66■■□□□ 1.86
COPE-201ENST00000262812 NUTM2FA1L443 756 aa26.66■■□□□ 1.86
COPE-201ENST00000262812 DDX17Q92841 729 aaKnown RBP26.66■■□□□ 1.86
COPE-201ENST00000262812 ORAI2Q96SN7 254 aa26.66■■□□□ 1.86
COPE-201ENST00000262812 POGKQ9P215 609 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms