RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 KLHL34Q8N239 644 aa17.93■□□□□ 0.46
LIMD2-201ENST00000259006 APAF1O14727 1248 aa17.92■□□□□ 0.46
LIMD2-201ENST00000259006 TMF1P82094 1093 aa17.92■□□□□ 0.46
LIMD2-201ENST00000259006 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
LIMD2-201ENST00000259006 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
LIMD2-201ENST00000259006 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
LIMD2-201ENST00000259006 TESK2Q96S53 571 aa17.91■□□□□ 0.46
LIMD2-201ENST00000259006 IGHDP01880 384 aa17.9■□□□□ 0.46
LIMD2-201ENST00000259006 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
LIMD2-201ENST00000259006 PPP2R1AP30153 589 aa17.89■□□□□ 0.46
LIMD2-201ENST00000259006 TNNT2P45379 298 aaPredicted RBP17.89■□□□□ 0.46
LIMD2-201ENST00000259006 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
LIMD2-201ENST00000259006 COG6Q9Y2V7 657 aa17.89■□□□□ 0.45
LIMD2-201ENST00000259006 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
LIMD2-201ENST00000259006 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
LIMD2-201ENST00000259006 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
LIMD2-201ENST00000259006 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
LIMD2-201ENST00000259006 PANK1Q8TE04 598 aa17.88■□□□□ 0.45
LIMD2-201ENST00000259006 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
LIMD2-201ENST00000259006 ARID3AQ99856 593 aa17.87■□□□□ 0.45
LIMD2-201ENST00000259006 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
LIMD2-201ENST00000259006 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
LIMD2-201ENST00000259006 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
LIMD2-201ENST00000259006 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
LIMD2-201ENST00000259006 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
LIMD2-201ENST00000259006 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
LIMD2-201ENST00000259006 CLCN1P35523 988 aa17.84■□□□□ 0.45
LIMD2-201ENST00000259006 PDCL3Q9H2J4 239 aa17.84■□□□□ 0.45
LIMD2-201ENST00000259006 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
LIMD2-201ENST00000259006 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
LIMD2-201ENST00000259006 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
LIMD2-201ENST00000259006 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
LIMD2-201ENST00000259006 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
LIMD2-201ENST00000259006 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
LIMD2-201ENST00000259006 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
LIMD2-201ENST00000259006 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
LIMD2-201ENST00000259006 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
LIMD2-201ENST00000259006 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
LIMD2-201ENST00000259006 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
LIMD2-201ENST00000259006 L1TD1Q5T7N2 865 aaKnown RBP17.77■□□□□ 0.44
LIMD2-201ENST00000259006 PANK2Q9BZ23 570 aa17.77■□□□□ 0.43
LIMD2-201ENST00000259006 PRDM10Q9NQV6 1147 aa17.76■□□□□ 0.43
LIMD2-201ENST00000259006 TTC37Q6PGP7 1564 aa17.76■□□□□ 0.43
LIMD2-201ENST00000259006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
LIMD2-201ENST00000259006 ZCCHC11Q5TAX3 1644 aaKnown RBP17.75■□□□□ 0.43
LIMD2-201ENST00000259006 AMER1Q5JTC6 1135 aaPredicted RBP17.75■□□□□ 0.43
LIMD2-201ENST00000259006 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
LIMD2-201ENST00000259006 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
LIMD2-201ENST00000259006 ADGRL2O95490 1459 aa17.75■□□□□ 0.43
LIMD2-201ENST00000259006 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
LIMD2-201ENST00000259006 CDC42BPAQ5VT25 1732 aa17.74■□□□□ 0.43
LIMD2-201ENST00000259006 USP19O94966 1318 aa17.74■□□□□ 0.43
LIMD2-201ENST00000259006 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
LIMD2-201ENST00000259006 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
LIMD2-201ENST00000259006 BECN1Q14457 450 aa17.73■□□□□ 0.43
LIMD2-201ENST00000259006 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
LIMD2-201ENST00000259006 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
LIMD2-201ENST00000259006 A2MP01023 1474 aa17.72■□□□□ 0.43
LIMD2-201ENST00000259006 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
LIMD2-201ENST00000259006 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
LIMD2-201ENST00000259006 ADGBQ8N7X0 1667 aa17.71■□□□□ 0.43
LIMD2-201ENST00000259006 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
LIMD2-201ENST00000259006 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.42
LIMD2-201ENST00000259006 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.42
LIMD2-201ENST00000259006 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
LIMD2-201ENST00000259006 VGLL3A8MV65 326 aa17.69■□□□□ 0.42
LIMD2-201ENST00000259006 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
LIMD2-201ENST00000259006 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
LIMD2-201ENST00000259006 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
LIMD2-201ENST00000259006 KDM5DQ9BY66 1539 aa17.68■□□□□ 0.42
LIMD2-201ENST00000259006 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
LIMD2-201ENST00000259006 E9PCH4 1651 aa17.68■□□□□ 0.42
LIMD2-201ENST00000259006 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
LIMD2-201ENST00000259006 MFAP1P55081 439 aaKnown RBP17.67■□□□□ 0.42
LIMD2-201ENST00000259006 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 PLCH2O75038 1416 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 RLBP1P12271 317 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 FAM13BQ9NYF5 915 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 E9PSI1 815 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 TPM2P07951 284 aa17.67■□□□□ 0.42
LIMD2-201ENST00000259006 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
LIMD2-201ENST00000259006 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
LIMD2-201ENST00000259006 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
LIMD2-201ENST00000259006 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
LIMD2-201ENST00000259006 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
LIMD2-201ENST00000259006 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
LIMD2-201ENST00000259006 CCDC141Q6ZP82 1450 aa17.65■□□□□ 0.42
LIMD2-201ENST00000259006 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
LIMD2-201ENST00000259006 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.41
LIMD2-201ENST00000259006 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
LIMD2-201ENST00000259006 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
LIMD2-201ENST00000259006 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
LIMD2-201ENST00000259006 ESPNB1AK53 854 aa17.63■□□□□ 0.41
LIMD2-201ENST00000259006 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
LIMD2-201ENST00000259006 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
LIMD2-201ENST00000259006 TRPM1Q7Z4N2 1603 aa17.63■□□□□ 0.41
LIMD2-201ENST00000259006 KIF3BO15066 747 aa17.63■□□□□ 0.41
LIMD2-201ENST00000259006 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms