RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ANKRD30AQ9BXX3 1397 aa26.28■■□□□ 1.8
RARA-201ENST00000254066 ANTXR1Q9H6X2 564 aa26.28■■□□□ 1.8
RARA-201ENST00000254066 MAPK8IP3Q9UPT6 1336 aa26.28■■□□□ 1.8
RARA-201ENST00000254066 LAMC1P11047 1609 aa26.27■■□□□ 1.8
RARA-201ENST00000254066 COL17A1Q9UMD9 1497 aaPredicted RBP26.27■■□□□ 1.8
RARA-201ENST00000254066 GOLGA6L3A6NEY3 463 aa26.27■■□□□ 1.8
RARA-201ENST00000254066 RGS3P49796 1198 aa26.27■■□□□ 1.8
RARA-201ENST00000254066 VSIG10Q8N0Z9 540 aa26.27■■□□□ 1.8
RARA-201ENST00000254066 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
RARA-201ENST00000254066 NAP1L5Q96NT1 182 aaPredicted RBP26.27■■□□□ 1.8
RARA-201ENST00000254066 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
RARA-201ENST00000254066 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
RARA-201ENST00000254066 XRCC6P12956 609 aaKnown RBP eCLIP26.24■■□□□ 1.79
RARA-201ENST00000254066 NCBP3Q53F19 620 aaKnown RBP26.24■■□□□ 1.79
RARA-201ENST00000254066 ANKRD50Q9ULJ7 1429 aa26.23■■□□□ 1.79
RARA-201ENST00000254066 PLEKHD1A6NEE1 506 aa26.23■■□□□ 1.79
RARA-201ENST00000254066 GOLGA2Q08379 1002 aa26.23■■□□□ 1.79
RARA-201ENST00000254066 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
RARA-201ENST00000254066 NLRP1Q9C000 1473 aa26.21■■□□□ 1.79
RARA-201ENST00000254066 ISY1Q9ULR0 285 aaKnown RBP26.2■■□□□ 1.79
RARA-201ENST00000254066 CCDC144AA2RUR9 1427 aa26.2■■□□□ 1.79
RARA-201ENST00000254066 AAMPQ13685 434 aa26.2■■□□□ 1.78
RARA-201ENST00000254066 ARAP3Q8WWN8 1544 aa26.19■■□□□ 1.78
RARA-201ENST00000254066 PLEKHH1Q9ULM0 1364 aa26.19■■□□□ 1.78
RARA-201ENST00000254066 TRMT2AQ8IZ69 625 aaKnown RBP26.18■■□□□ 1.78
RARA-201ENST00000254066 NINLQ9Y2I6 1382 aa26.18■■□□□ 1.78
RARA-201ENST00000254066 PRAG1Q86YV5 1406 aa26.17■■□□□ 1.78
RARA-201ENST00000254066 ADAMTS8Q9UP79 889 aa26.17■■□□□ 1.78
RARA-201ENST00000254066 NEO1Q92859 1461 aa26.16■■□□□ 1.78
RARA-201ENST00000254066 MRE11P49959 708 aa26.16■■□□□ 1.78
RARA-201ENST00000254066 SLFN5Q08AF3 891 aa26.16■■□□□ 1.78
RARA-201ENST00000254066 SHANK2Q9UPX8 1470 aa26.15■■□□□ 1.78
RARA-201ENST00000254066 NUP155O75694 1391 aa26.15■■□□□ 1.78
RARA-201ENST00000254066 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.78
RARA-201ENST00000254066 CC2D1BQ5T0F9 858 aaKnown RBP26.14■■□□□ 1.78
RARA-201ENST00000254066 SLKQ9H2G2 1235 aaPredicted RBP26.14■■□□□ 1.77
RARA-201ENST00000254066 UPF2Q9HAU5 1272 aaKnown RBP26.14■■□□□ 1.77
RARA-201ENST00000254066 KDM2AQ9Y2K7 1162 aa26.14■■□□□ 1.77
RARA-201ENST00000254066 PRDM15P57071 1507 aaPredicted RBP26.13■■□□□ 1.77
RARA-201ENST00000254066 TROQ12816 1431 aaPredicted RBP26.13■■□□□ 1.77
RARA-201ENST00000254066 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
RARA-201ENST00000254066 NKTRP30414 1462 aaKnown RBP26.12■■□□□ 1.77
RARA-201ENST00000254066 MCM4P33991 863 aa26.12■■□□□ 1.77
RARA-201ENST00000254066 GPATCH8Q9UKJ3 1502 aaKnown RBP26.11■■□□□ 1.77
RARA-201ENST00000254066 PDE3AQ14432 1141 aa26.1■■□□□ 1.77
RARA-201ENST00000254066 WDR43Q15061 677 aaKnown RBP eCLIP26.1■■□□□ 1.77
RARA-201ENST00000254066 PANK3Q9H999 370 aa26.1■■□□□ 1.77
RARA-201ENST00000254066 KDM4FA0A1W2PPD8 638 aa26.1■■□□□ 1.77
RARA-201ENST00000254066 CENPJQ9HC77 1338 aaPredicted RBP26.1■■□□□ 1.77
RARA-201ENST00000254066 TBC1D32Q96NH3 1257 aa26.09■■□□□ 1.77
RARA-201ENST00000254066 RBM10P98175 930 aaKnown RBP26.09■■□□□ 1.77
RARA-201ENST00000254066 ARXQ96QS3 562 aa26.08■■□□□ 1.77
RARA-201ENST00000254066 TESK2Q96S53 571 aa26.08■■□□□ 1.77
RARA-201ENST00000254066 A0A0U1RQG5 324 aaPredicted RBP26.07■■□□□ 1.76
RARA-201ENST00000254066 SEC24BO95487 1268 aa26.07■■□□□ 1.76
RARA-201ENST00000254066 TPM2P07951 284 aa26.07■■□□□ 1.76
RARA-201ENST00000254066 NGEFQ8N5V2 710 aa26.07■■□□□ 1.76
RARA-201ENST00000254066 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
RARA-201ENST00000254066 IGHDP01880 384 aa26.06■■□□□ 1.76
RARA-201ENST00000254066 CFAP74Q9C0B2 1584 aa26.06■■□□□ 1.76
RARA-201ENST00000254066 DISP3Q9P2K9 1392 aa26.05■■□□□ 1.76
RARA-201ENST00000254066 TBC1D2Q9BYX2 928 aa26.05■■□□□ 1.76
RARA-201ENST00000254066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.05■■□□□ 1.76
RARA-201ENST00000254066 EIF2AK4Q9P2K8 1649 aaKnown RBP26.04■■□□□ 1.76
RARA-201ENST00000254066 ESPNB1AK53 854 aa26.04■■□□□ 1.76
RARA-201ENST00000254066 TMF1P82094 1093 aa26.04■■□□□ 1.76
RARA-201ENST00000254066 MYH16Q9H6N6 1097 aa26.04■■□□□ 1.76
RARA-201ENST00000254066 PANK2Q9BZ23 570 aa26.03■■□□□ 1.76
RARA-201ENST00000254066 CHMP5Q9NZZ3 219 aa26.03■■□□□ 1.76
RARA-201ENST00000254066 PIK3C2GO75747 1445 aa26.02■■□□□ 1.76
RARA-201ENST00000254066 ADGRL1O94910 1474 aa26.02■■□□□ 1.76
RARA-201ENST00000254066 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
RARA-201ENST00000254066 CLUAP1Q96AJ1 413 aa26.02■■□□□ 1.76
RARA-201ENST00000254066 PPP2R1AP30153 589 aa26.01■■□□□ 1.75
RARA-201ENST00000254066 TRAK2O60296 914 aa26■■□□□ 1.75
RARA-201ENST00000254066 PDCL3Q9H2J4 239 aa26■■□□□ 1.75
RARA-201ENST00000254066 E9PSI1 815 aa26■■□□□ 1.75
RARA-201ENST00000254066 KLHL34Q8N239 644 aa26■■□□□ 1.75
RARA-201ENST00000254066 BCL11BQ9C0K0 894 aaPredicted RBP25.99■■□□□ 1.75
RARA-201ENST00000254066 GRPEL1Q9HAV7 217 aa25.99■■□□□ 1.75
RARA-201ENST00000254066 DDX11L8A8MPP1 907 aa25.98■■□□□ 1.75
RARA-201ENST00000254066 TTC37Q6PGP7 1564 aa25.98■■□□□ 1.75
RARA-201ENST00000254066 PMFBP1Q8TBY8 1022 aa25.98■■□□□ 1.75
RARA-201ENST00000254066 FANCAO15360 1455 aa25.98■■□□□ 1.75
RARA-201ENST00000254066 C9orf84Q5VXU9 1444 aa25.97■■□□□ 1.75
RARA-201ENST00000254066 TAF7LQ5H9L4 462 aa25.97■■□□□ 1.75
RARA-201ENST00000254066 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
RARA-201ENST00000254066 NPC1L1Q9UHC9 1359 aa25.94■■□□□ 1.74
RARA-201ENST00000254066 PLCH2O75038 1416 aa25.94■■□□□ 1.74
RARA-201ENST00000254066 BCAR3O75815 825 aa25.93■■□□□ 1.74
RARA-201ENST00000254066 NBPF1Q3BBV0 1214 aa25.93■■□□□ 1.74
RARA-201ENST00000254066 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
RARA-201ENST00000254066 KNSTRNQ9Y448 316 aa25.92■■□□□ 1.74
RARA-201ENST00000254066 RAPGEF3O95398 923 aa25.91■■□□□ 1.74
RARA-201ENST00000254066 TRIM44Q96DX7 344 aaPredicted RBP25.91■■□□□ 1.74
RARA-201ENST00000254066 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
RARA-201ENST00000254066 A2MP01023 1474 aa25.9■■□□□ 1.74
RARA-201ENST00000254066 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
RARA-201ENST00000254066 SCAPERQ9BY12 1400 aa25.9■■□□□ 1.74
RARA-201ENST00000254066 MAGI2Q86UL8 1455 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms