RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
NEK4-201ENST00000233027 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
NEK4-201ENST00000233027 PANK1Q8TE04 598 aa16.39■□□□□ 0.21
NEK4-201ENST00000233027 MARCH6O60337 910 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
NEK4-201ENST00000233027 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
NEK4-201ENST00000233027 REC8O95072 547 aa16.37■□□□□ 0.21
NEK4-201ENST00000233027 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
NEK4-201ENST00000233027 FOSBP53539 338 aa16.37■□□□□ 0.21
NEK4-201ENST00000233027 ZNF771Q7L3S4 317 aaPredicted RBP16.37■□□□□ 0.21
NEK4-201ENST00000233027 TMX4Q9H1E5 349 aaPredicted RBP16.37■□□□□ 0.21
NEK4-201ENST00000233027 CNTLNQ9NXG0 1405 aa16.37■□□□□ 0.21
NEK4-201ENST00000233027 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
NEK4-201ENST00000233027 G3V3G9 751 aa16.36■□□□□ 0.21
NEK4-201ENST00000233027 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
NEK4-201ENST00000233027 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
NEK4-201ENST00000233027 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
NEK4-201ENST00000233027 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
NEK4-201ENST00000233027 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
NEK4-201ENST00000233027 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
NEK4-201ENST00000233027 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
NEK4-201ENST00000233027 IFIT2P09913 472 aaKnown RBP16.33■□□□□ 0.21
NEK4-201ENST00000233027 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.21
NEK4-201ENST00000233027 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
NEK4-201ENST00000233027 TSR1Q2NL82 804 aaKnown RBP16.33■□□□□ 0.2
NEK4-201ENST00000233027 RUFY2Q8WXA3 655 aa16.33■□□□□ 0.2
NEK4-201ENST00000233027 TEFQ10587 303 aa16.33■□□□□ 0.2
NEK4-201ENST00000233027 HMOX1P09601 288 aa16.33■□□□□ 0.2
NEK4-201ENST00000233027 ZKSCAN1P17029 563 aaPredicted RBP16.32■□□□□ 0.2
NEK4-201ENST00000233027 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
NEK4-201ENST00000233027 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
NEK4-201ENST00000233027 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
NEK4-201ENST00000233027 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
NEK4-201ENST00000233027 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
NEK4-201ENST00000233027 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
NEK4-201ENST00000233027 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
NEK4-201ENST00000233027 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
NEK4-201ENST00000233027 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
NEK4-201ENST00000233027 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
NEK4-201ENST00000233027 SMC3Q9UQE7 1217 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 TPM1P09493 284 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
NEK4-201ENST00000233027 APPP05067 770 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 NEXNQ0ZGT2 675 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
NEK4-201ENST00000233027 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
NEK4-201ENST00000233027 TRIM29Q14134 588 aa16.28■□□□□ 0.2
NEK4-201ENST00000233027 PRM3Q9NNZ6 103 aa16.28■□□□□ 0.2
NEK4-201ENST00000233027 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
NEK4-201ENST00000233027 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
NEK4-201ENST00000233027 TPM2P07951 284 aa16.28■□□□□ 0.2
NEK4-201ENST00000233027 ROCK1Q13464 1354 aa16.28■□□□□ 0.2
NEK4-201ENST00000233027 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.2
NEK4-201ENST00000233027 NUCB2P80303 420 aa16.27■□□□□ 0.2
NEK4-201ENST00000233027 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
NEK4-201ENST00000233027 CPLX1O14810 134 aa16.27■□□□□ 0.19
NEK4-201ENST00000233027 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
NEK4-201ENST00000233027 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
NEK4-201ENST00000233027 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
NEK4-201ENST00000233027 RAD21O60216 631 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
NEK4-201ENST00000233027 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
NEK4-201ENST00000233027 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 GPS2Q13227 327 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 KIF21BO75037 1637 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 G3BP1Q13283 466 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEK4-201ENST00000233027 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
NEK4-201ENST00000233027 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
NEK4-201ENST00000233027 PRDM2Q13029 1718 aa16.24■□□□□ 0.19
NEK4-201ENST00000233027 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
NEK4-201ENST00000233027 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
NEK4-201ENST00000233027 CDC45O75419 566 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
NEK4-201ENST00000233027 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 GNAI1P63096 354 aa16.23■□□□□ 0.19
NEK4-201ENST00000233027 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 AKNAQ7Z591 1439 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 TRAK2O60296 914 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 KDM4AO75164 1064 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 EVA1CP58658 441 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 PTPRGP23470 1445 aa16.22■□□□□ 0.19
NEK4-201ENST00000233027 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
NEK4-201ENST00000233027 MRE11P49959 708 aa16.21■□□□□ 0.19
NEK4-201ENST00000233027 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
NEK4-201ENST00000233027 CUX1P39880 1505 aa16.21■□□□□ 0.19
NEK4-201ENST00000233027 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
NEK4-201ENST00000233027 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms