RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KNSTRNQ9Y448 316 aa21.58■■□□□ 1.04
LTBR-201ENST00000228918 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
LTBR-201ENST00000228918 ASXL1Q8IXJ9 1541 aa21.57■■□□□ 1.04
LTBR-201ENST00000228918 AMER1Q5JTC6 1135 aaPredicted RBP21.57■■□□□ 1.04
LTBR-201ENST00000228918 FANCAO15360 1455 aa21.56■■□□□ 1.04
LTBR-201ENST00000228918 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
LTBR-201ENST00000228918 KANK1Q14678 1352 aa21.56■■□□□ 1.04
LTBR-201ENST00000228918 MROH1Q8NDA8 1641 aa21.56■■□□□ 1.04
LTBR-201ENST00000228918 KDM5AP29375 1690 aaKnown RBP21.55■■□□□ 1.04
LTBR-201ENST00000228918 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
LTBR-201ENST00000228918 ADAMTS8Q9UP79 889 aa21.55■■□□□ 1.04
LTBR-201ENST00000228918 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
LTBR-201ENST00000228918 IPO9Q96P70 1041 aaKnown RBP21.54■■□□□ 1.04
LTBR-201ENST00000228918 EIF3AQ14152 1382 aaKnown RBP21.54■■□□□ 1.04
LTBR-201ENST00000228918 PIK3C2GO75747 1445 aa21.53■■□□□ 1.04
LTBR-201ENST00000228918 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
LTBR-201ENST00000228918 NPC1L1Q9UHC9 1359 aa21.52■■□□□ 1.04
LTBR-201ENST00000228918 MYOM2P54296 1465 aa21.52■■□□□ 1.04
LTBR-201ENST00000228918 ABCA6Q8N139 1617 aa21.52■■□□□ 1.03
LTBR-201ENST00000228918 PLIN1O60240 522 aa21.5■■□□□ 1.03
LTBR-201ENST00000228918 IFT172Q9UG01 1749 aa21.5■■□□□ 1.03
LTBR-201ENST00000228918 ADGRL1O94910 1474 aa21.5■■□□□ 1.03
LTBR-201ENST00000228918 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
LTBR-201ENST00000228918 KIF1BO60333 1816 aa21.5■■□□□ 1.03
LTBR-201ENST00000228918 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
LTBR-201ENST00000228918 UGGT1Q9NYU2 1555 aa21.49■■□□□ 1.03
LTBR-201ENST00000228918 EFCAB6Q5THR3 1501 aa21.48■■□□□ 1.03
LTBR-201ENST00000228918 KIF3BO15066 747 aa21.48■■□□□ 1.03
LTBR-201ENST00000228918 CRBNQ96SW2 442 aa21.48■■□□□ 1.03
LTBR-201ENST00000228918 MS4A1P11836 297 aa21.47■■□□□ 1.03
LTBR-201ENST00000228918 ZNF521Q96K83 1311 aa21.47■■□□□ 1.03
LTBR-201ENST00000228918 MROH2AA6NES4 1674 aa21.45■■□□□ 1.02
LTBR-201ENST00000228918 ERVK-7P63135 1459 aa21.45■■□□□ 1.02
LTBR-201ENST00000228918 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
LTBR-201ENST00000228918 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
LTBR-201ENST00000228918 PDE4AP27815 886 aa21.44■■□□□ 1.02
LTBR-201ENST00000228918 MYO3AQ8NEV4 1616 aa21.44■■□□□ 1.02
LTBR-201ENST00000228918 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
LTBR-201ENST00000228918 ZBTB47Q9UFB7 747 aaPredicted RBP21.43■■□□□ 1.02
LTBR-201ENST00000228918 BACH2Q9BYV9 841 aa21.42■■□□□ 1.02
LTBR-201ENST00000228918 NRXN1Q9ULB1 1477 aa21.42■■□□□ 1.02
LTBR-201ENST00000228918 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
LTBR-201ENST00000228918 LMTK2Q8IWU2 1503 aa21.41■■□□□ 1.02
LTBR-201ENST00000228918 CFAP70Q5T0N1 1121 aa21.41■■□□□ 1.02
LTBR-201ENST00000228918 ADGRF5Q8IZF2 1346 aa21.4■■□□□ 1.02
LTBR-201ENST00000228918 SLC24A1O60721 1099 aa21.4■■□□□ 1.02
LTBR-201ENST00000228918 GOLGA2Q08379 1002 aa21.4■■□□□ 1.02
LTBR-201ENST00000228918 C20orf194Q5TEA3 1177 aa21.4■■□□□ 1.02
LTBR-201ENST00000228918 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
LTBR-201ENST00000228918 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
LTBR-201ENST00000228918 NBR1Q14596 966 aa21.37■■□□□ 1.01
LTBR-201ENST00000228918 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
LTBR-201ENST00000228918 KDM2BQ8NHM5 1336 aa21.36■■□□□ 1.01
LTBR-201ENST00000228918 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
LTBR-201ENST00000228918 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
LTBR-201ENST00000228918 NPM2Q86SE8 214 aaKnown RBP21.35■■□□□ 1.01
LTBR-201ENST00000228918 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
LTBR-201ENST00000228918 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
LTBR-201ENST00000228918 ZC3H13Q5T200 1668 aaKnown RBP21.33■■□□□ 1
LTBR-201ENST00000228918 PRKCSHP14314 528 aaPredicted RBP21.32■■□□□ 1
LTBR-201ENST00000228918 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
LTBR-201ENST00000228918 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
LTBR-201ENST00000228918 PPLO60437 1756 aa21.32■■□□□ 1
LTBR-201ENST00000228918 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.31■■□□□ 1
LTBR-201ENST00000228918 NOS1P29475 1434 aa21.31■■□□□ 1
LTBR-201ENST00000228918 SKAP1Q86WV1 359 aa21.31■■□□□ 1
LTBR-201ENST00000228918 NKTRP30414 1462 aaKnown RBP21.3■■□□□ 1
LTBR-201ENST00000228918 APAF1O14727 1248 aa21.29■■□□□ 1
LTBR-201ENST00000228918 CENPQQ7L2Z9 268 aaPredicted RBP21.29■■□□□ 1
LTBR-201ENST00000228918 FRMPD1Q5SYB0 1578 aa21.28■■□□□ 1
LTBR-201ENST00000228918 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
LTBR-201ENST00000228918 SPINK5Q9NQ38 1064 aaPredicted RBP21.27■■□□□ 1
LTBR-201ENST00000228918 CFAP74Q9C0B2 1584 aa21.27■■□□□ 1
LTBR-201ENST00000228918 CENPJQ9HC77 1338 aaPredicted RBP21.27■■□□□ 1
LTBR-201ENST00000228918 NPATQ14207 1427 aa21.27■□□□□ 0.99
LTBR-201ENST00000228918 POLR3AO14802 1390 aaPredicted RBP21.27■□□□□ 0.99
LTBR-201ENST00000228918 ADGRB1O14514 1584 aa21.26■□□□□ 0.99
LTBR-201ENST00000228918 SHPRHQ149N8 1683 aa21.25■□□□□ 0.99
LTBR-201ENST00000228918 NGEFQ8N5V2 710 aa21.25■□□□□ 0.99
LTBR-201ENST00000228918 POGZQ7Z3K3 1410 aa21.25■□□□□ 0.99
LTBR-201ENST00000228918 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
LTBR-201ENST00000228918 E9PSI1 815 aa21.24■□□□□ 0.99
LTBR-201ENST00000228918 CFAP65Q6ZU64 1925 aaKnown RBP21.24■□□□□ 0.99
LTBR-201ENST00000228918 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
LTBR-201ENST00000228918 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
LTBR-201ENST00000228918 NSD3Q9BZ95 1437 aa21.23■□□□□ 0.99
LTBR-201ENST00000228918 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
LTBR-201ENST00000228918 CHGAP10645 457 aaKnown RBP21.2■□□□□ 0.98
LTBR-201ENST00000228918 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
LTBR-201ENST00000228918 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
LTBR-201ENST00000228918 ABCC3O15438 1527 aa21.19■□□□□ 0.98
LTBR-201ENST00000228918 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
LTBR-201ENST00000228918 BCAR3O75815 825 aa21.17■□□□□ 0.98
LTBR-201ENST00000228918 DDRGK1Q96HY6 314 aa21.17■□□□□ 0.98
LTBR-201ENST00000228918 CAMSAP1Q5T5Y3 1602 aa21.17■□□□□ 0.98
LTBR-201ENST00000228918 CD109Q6YHK3 1445 aa21.17■□□□□ 0.98
LTBR-201ENST00000228918 RPGRIP1LQ68CZ1 1315 aa21.16■□□□□ 0.98
LTBR-201ENST00000228918 IQSEC2Q5JU85 1478 aa21.16■□□□□ 0.98
LTBR-201ENST00000228918 GLI2P10070 1586 aa21.16■□□□□ 0.98
LTBR-201ENST00000228918 SIGLEC1Q9BZZ2 1709 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms