RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
DDX11-201ENST00000228264 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
DDX11-201ENST00000228264 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
DDX11-201ENST00000228264 TMF1P82094 1093 aa13.49□□□□□ -0.25
DDX11-201ENST00000228264 CROCC2H7BZ55 1655 aa13.49□□□□□ -0.25
DDX11-201ENST00000228264 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
DDX11-201ENST00000228264 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
DDX11-201ENST00000228264 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
DDX11-201ENST00000228264 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
DDX11-201ENST00000228264 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
DDX11-201ENST00000228264 XRCC6P12956 609 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX11-201ENST00000228264 JPH4Q96JJ6 628 aa13.46□□□□□ -0.25
DDX11-201ENST00000228264 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
DDX11-201ENST00000228264 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
DDX11-201ENST00000228264 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
DDX11-201ENST00000228264 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
DDX11-201ENST00000228264 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
DDX11-201ENST00000228264 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
DDX11-201ENST00000228264 PTPRGP23470 1445 aa13.43□□□□□ -0.26
DDX11-201ENST00000228264 PLEKHH2Q8IVE3 1493 aa13.43□□□□□ -0.26
DDX11-201ENST00000228264 ATP10BO94823 1461 aa13.43□□□□□ -0.26
DDX11-201ENST00000228264 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
DDX11-201ENST00000228264 ABCC10Q5T3U5 1492 aa13.41□□□□□ -0.26
DDX11-201ENST00000228264 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
DDX11-201ENST00000228264 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
DDX11-201ENST00000228264 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
DDX11-201ENST00000228264 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
DDX11-201ENST00000228264 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
DDX11-201ENST00000228264 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
DDX11-201ENST00000228264 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
DDX11-201ENST00000228264 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
DDX11-201ENST00000228264 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
DDX11-201ENST00000228264 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
DDX11-201ENST00000228264 NKTRP30414 1462 aaKnown RBP13.39□□□□□ -0.27
DDX11-201ENST00000228264 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
DDX11-201ENST00000228264 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
DDX11-201ENST00000228264 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
DDX11-201ENST00000228264 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
DDX11-201ENST00000228264 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
DDX11-201ENST00000228264 FGD1P98174 961 aa13.37□□□□□ -0.27
DDX11-201ENST00000228264 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
DDX11-201ENST00000228264 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
DDX11-201ENST00000228264 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
DDX11-201ENST00000228264 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
DDX11-201ENST00000228264 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
DDX11-201ENST00000228264 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
DDX11-201ENST00000228264 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
DDX11-201ENST00000228264 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
DDX11-201ENST00000228264 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
DDX11-201ENST00000228264 INSRP06213 1382 aa13.35□□□□□ -0.27
DDX11-201ENST00000228264 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
DDX11-201ENST00000228264 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
DDX11-201ENST00000228264 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
DDX11-201ENST00000228264 E9PSI1 815 aa13.34□□□□□ -0.27
DDX11-201ENST00000228264 MCM4P33991 863 aa13.33□□□□□ -0.28
DDX11-201ENST00000228264 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
DDX11-201ENST00000228264 TCP11L2Q8N4U5 519 aa13.32□□□□□ -0.28
DDX11-201ENST00000228264 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
DDX11-201ENST00000228264 GOLGA6L3A6NEY3 463 aa13.31□□□□□ -0.28
DDX11-201ENST00000228264 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
DDX11-201ENST00000228264 TRAK2O60296 914 aa13.31□□□□□ -0.28
DDX11-201ENST00000228264 ABCA8O94911 1581 aa13.31□□□□□ -0.28
DDX11-201ENST00000228264 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
DDX11-201ENST00000228264 BECN1Q14457 450 aa13.3□□□□□ -0.28
DDX11-201ENST00000228264 CCDC141Q6ZP82 1450 aa13.3□□□□□ -0.28
DDX11-201ENST00000228264 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
DDX11-201ENST00000228264 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
DDX11-201ENST00000228264 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
DDX11-201ENST00000228264 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
DDX11-201ENST00000228264 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
DDX11-201ENST00000228264 CDC42BPBQ9Y5S2 1711 aa13.29□□□□□ -0.28
DDX11-201ENST00000228264 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
DDX11-201ENST00000228264 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
DDX11-201ENST00000228264 CGNL1Q0VF96 1302 aa13.29□□□□□ -0.28
DDX11-201ENST00000228264 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
DDX11-201ENST00000228264 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
DDX11-201ENST00000228264 C22orf23Q9BZE7 217 aa13.28□□□□□ -0.28
DDX11-201ENST00000228264 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
DDX11-201ENST00000228264 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
DDX11-201ENST00000228264 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.28
DDX11-201ENST00000228264 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
DDX11-201ENST00000228264 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.29
DDX11-201ENST00000228264 MYOM1P52179 1685 aa13.27□□□□□ -0.29
DDX11-201ENST00000228264 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.29
DDX11-201ENST00000228264 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
DDX11-201ENST00000228264 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
DDX11-201ENST00000228264 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
DDX11-201ENST00000228264 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
DDX11-201ENST00000228264 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
DDX11-201ENST00000228264 MTHFSP49914 203 aa13.26□□□□□ -0.29
DDX11-201ENST00000228264 AAMPQ13685 434 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX11-201ENST00000228264 ARID3AQ99856 593 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 FBLN1P23142 703 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 TAF7LQ5H9L4 462 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 CARMIL2Q6F5E8 1435 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 ARHGAP5Q13017 1502 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
DDX11-201ENST00000228264 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms