RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
DDX11-201ENST00000228264 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
DDX11-201ENST00000228264 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
DDX11-201ENST00000228264 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
DDX11-201ENST00000228264 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
DDX11-201ENST00000228264 HRCP23327 699 aa17.69■□□□□ 0.42
DDX11-201ENST00000228264 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
DDX11-201ENST00000228264 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
DDX11-201ENST00000228264 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
DDX11-201ENST00000228264 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
DDX11-201ENST00000228264 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
DDX11-201ENST00000228264 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
DDX11-201ENST00000228264 MYT1Q01538 1121 aa17.03■□□□□ 0.32
DDX11-201ENST00000228264 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
DDX11-201ENST00000228264 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
DDX11-201ENST00000228264 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
DDX11-201ENST00000228264 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
DDX11-201ENST00000228264 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
DDX11-201ENST00000228264 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
DDX11-201ENST00000228264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
DDX11-201ENST00000228264 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
DDX11-201ENST00000228264 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
DDX11-201ENST00000228264 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
DDX11-201ENST00000228264 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
DDX11-201ENST00000228264 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
DDX11-201ENST00000228264 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.2
DDX11-201ENST00000228264 ACIN1Q9UKV3 1341 aaKnown RBP16.27■□□□□ 0.2
DDX11-201ENST00000228264 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.19
DDX11-201ENST00000228264 CCER1Q8TC90 406 aaPredicted RBP16.24■□□□□ 0.19
DDX11-201ENST00000228264 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
DDX11-201ENST00000228264 ABCC9O60706 1549 aa16.16■□□□□ 0.18
DDX11-201ENST00000228264 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
DDX11-201ENST00000228264 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
DDX11-201ENST00000228264 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
DDX11-201ENST00000228264 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
DDX11-201ENST00000228264 MIER1Q8N108 512 aa15.89■□□□□ 0.13
DDX11-201ENST00000228264 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
DDX11-201ENST00000228264 WIZO95785 1651 aa15.85■□□□□ 0.13
DDX11-201ENST00000228264 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
DDX11-201ENST00000228264 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
DDX11-201ENST00000228264 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
DDX11-201ENST00000228264 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
DDX11-201ENST00000228264 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
DDX11-201ENST00000228264 SOGA1O94964 1423 aa15.76■□□□□ 0.11
DDX11-201ENST00000228264 RUSC2Q8N2Y8 1516 aa15.75■□□□□ 0.11
DDX11-201ENST00000228264 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
DDX11-201ENST00000228264 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
DDX11-201ENST00000228264 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
DDX11-201ENST00000228264 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
DDX11-201ENST00000228264 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
DDX11-201ENST00000228264 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
DDX11-201ENST00000228264 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
DDX11-201ENST00000228264 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
DDX11-201ENST00000228264 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
DDX11-201ENST00000228264 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
DDX11-201ENST00000228264 SUPT16HQ9Y5B9 1047 aaKnown RBP15.47■□□□□ 0.07
DDX11-201ENST00000228264 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
DDX11-201ENST00000228264 BCANQ96GW7 911 aa15.43■□□□□ 0.06
DDX11-201ENST00000228264 NACADO15069 1562 aa15.42■□□□□ 0.06
DDX11-201ENST00000228264 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
DDX11-201ENST00000228264 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
DDX11-201ENST00000228264 APLP2Q06481 763 aa15.34■□□□□ 0.05
DDX11-201ENST00000228264 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.05
DDX11-201ENST00000228264 ITGAEP38570 1179 aa15.33■□□□□ 0.04
DDX11-201ENST00000228264 KANK4Q5T7N3 995 aaPredicted RBP15.3■□□□□ 0.04
DDX11-201ENST00000228264 CLIP1P30622 1438 aa15.3■□□□□ 0.04
DDX11-201ENST00000228264 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
DDX11-201ENST00000228264 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
DDX11-201ENST00000228264 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
DDX11-201ENST00000228264 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
DDX11-201ENST00000228264 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
DDX11-201ENST00000228264 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
DDX11-201ENST00000228264 SYNJ1O43426 1573 aa15.21■□□□□ 0.02
DDX11-201ENST00000228264 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
DDX11-201ENST00000228264 VPS8Q8N3P4 1428 aa15.19■□□□□ 0.02
DDX11-201ENST00000228264 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
DDX11-201ENST00000228264 FKBP8Q14318 412 aa15.15■□□□□ 0.02
DDX11-201ENST00000228264 KIF21BO75037 1637 aa15.13■□□□□ 0.01
DDX11-201ENST00000228264 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
DDX11-201ENST00000228264 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
DDX11-201ENST00000228264 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
DDX11-201ENST00000228264 EEA1Q15075 1411 aa15.11■□□□□ 0.01
DDX11-201ENST00000228264 SIN3AQ96ST3 1273 aa15.1■□□□□ 0.01
DDX11-201ENST00000228264 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
DDX11-201ENST00000228264 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
DDX11-201ENST00000228264 ARAP1Q96P48 1450 aa15□□□□□ -0.01
DDX11-201ENST00000228264 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
DDX11-201ENST00000228264 MSH5O43196 834 aa14.99□□□□□ -0.01
DDX11-201ENST00000228264 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
DDX11-201ENST00000228264 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
DDX11-201ENST00000228264 MAPKBP1O60336 1514 aa14.91□□□□□ -0.02
DDX11-201ENST00000228264 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
DDX11-201ENST00000228264 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
DDX11-201ENST00000228264 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
DDX11-201ENST00000228264 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
DDX11-201ENST00000228264 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
DDX11-201ENST00000228264 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
DDX11-201ENST00000228264 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
DDX11-201ENST00000228264 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
DDX11-201ENST00000228264 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms